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The map label for this gene is dapA [H]

Identifier: 77457534

GI number: 77457534

Start: 1482104

End: 1482985

Strand: Reverse

Name: dapA [H]

Synonym: Pfl01_1307

Alternate gene names: 77457534

Gene position: 1482985-1482104 (Counterclockwise)

Preceding gene: 77457535

Following gene: 77457529

Centisome position: 23.03

GC content: 65.42

Gene sequence:

>882_bases
ATGTCCAACATTCACGGCATCATCGGCTACACCATCACCCCGTTCGGCGCCAACGGCGAAGGCGTTGACCTGCCGGCCCT
CGGCCGCTCCATCGACCGTCTGATCGCCGGCGGCGTCCACGCCATTGCGCCACTGGGCAGCACCGGCGAAGGCGCCTACC
TGAGCGATGCGGAGTGGGATCAGGTCGCCGAGTTCAGCATCAAGCACGTGGCCAAACGCGTGCCGACCGTGGTCAGCGTG
TCCGACCTGACCACCGCCAAAGCGGTACGCCGCGCACGCTTTGCCGAAGCCCATGGCGCCGACGTGGTGATGGTGTTGCC
GACGTCCTACTGGAAGCTCACCGAAGCGGAAATCCTCGCCCACTACCGCGCCATCGGCGACAGCATCGGCGTGCCGATCA
TGCTCTACAACAACCCGGCCACCAGCGGCACCGACATGTCGGTGGAGCTGATCCTGCGCATCGTCAACGGCGTGGAGAAC
GTGACCATGGTCAAGGAGAGCACCGGCGACATCCAGCGCATGCACAAGTTGCAACTGCTCGGCGAAGGCCGGGTGCCGTT
CTACAACGGTTGCAACCCGCTGGCGCTGGAGGCGTTCGCCGCCGGGGCCAAGGGTTGGTGCACGGCAGCGCCGAACCTGA
TCCCGCAGCTCAACCTGGATTTGTACGAAGCCACACTGGCGGGGGATCTCGGCAAGGCGCGGGAGCTGTTCTACCGCCAG
TTGCCGCTGCTGGACTTCATCCTCAAGGGCGGCTTGCCGGCGACGATCAAGGCCGGTCTGCGACTGACCGGTCTGGAAGT
CGGCGATCCGCGTTTGCCGGTGTTCCCGCTGGCTGAGGCCGGGCGTACGCAATTGCAGGCCTTGCTGTACACCTTGCGCT
GA

Upstream 100 bases:

>100_bases
CCAAACGCCACGCCGCAGCCTTCAACTACTACGCCCGGCAGAACCTGCGTCAGCACGCCGATTGCCTGAACTGAACACCT
CATCCTTGCGGAGCACTCTC

Downstream 100 bases:

>100_bases
ACGAAAAAAATCCCGCCCGGTTCACCCCGGGCGGGATTTTTTGTGGCCGTCGATCAGAGGCTGGCGGCGCGTTTCATGGC
TTCGCGGTGGAACGGCTGAT

Product: dihydrodipicolinate synthetase

Products: NA

Alternate protein names: DHDPS [H]

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MSNIHGIIGYTITPFGANGEGVDLPALGRSIDRLIAGGVHAIAPLGSTGEGAYLSDAEWDQVAEFSIKHVAKRVPTVVSV
SDLTTAKAVRRARFAEAHGADVVMVLPTSYWKLTEAEILAHYRAIGDSIGVPIMLYNNPATSGTDMSVELILRIVNGVEN
VTMVKESTGDIQRMHKLQLLGEGRVPFYNGCNPLALEAFAAGAKGWCTAAPNLIPQLNLDLYEATLAGDLGKARELFYRQ
LPLLDFILKGGLPATIKAGLRLTGLEVGDPRLPVFPLAEAGRTQLQALLYTLR

Sequences:

>Translated_293_residues
MSNIHGIIGYTITPFGANGEGVDLPALGRSIDRLIAGGVHAIAPLGSTGEGAYLSDAEWDQVAEFSIKHVAKRVPTVVSV
SDLTTAKAVRRARFAEAHGADVVMVLPTSYWKLTEAEILAHYRAIGDSIGVPIMLYNNPATSGTDMSVELILRIVNGVEN
VTMVKESTGDIQRMHKLQLLGEGRVPFYNGCNPLALEAFAAGAKGWCTAAPNLIPQLNLDLYEATLAGDLGKARELFYRQ
LPLLDFILKGGLPATIKAGLRLTGLEVGDPRLPVFPLAEAGRTQLQALLYTLR
>Mature_292_residues
SNIHGIIGYTITPFGANGEGVDLPALGRSIDRLIAGGVHAIAPLGSTGEGAYLSDAEWDQVAEFSIKHVAKRVPTVVSVS
DLTTAKAVRRARFAEAHGADVVMVLPTSYWKLTEAEILAHYRAIGDSIGVPIMLYNNPATSGTDMSVELILRIVNGVENV
TMVKESTGDIQRMHKLQLLGEGRVPFYNGCNPLALEAFAAGAKGWCTAAPNLIPQLNLDLYEATLAGDLGKARELFYRQL
PLLDFILKGGLPATIKAGLRLTGLEVGDPRLPVFPLAEAGRTQLQALLYTLR

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Homo sapiens, GI13540533, Length=283, Percent_Identity=26.8551236749117, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI31543060, Length=292, Percent_Identity=24.3150684931507, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI1786463, Length=280, Percent_Identity=29.2857142857143, Blast_Score=120, Evalue=7e-29,
Organism=Escherichia coli, GI87082415, Length=295, Percent_Identity=28.4745762711864, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1788823, Length=286, Percent_Identity=26.5734265734266, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1789620, Length=293, Percent_Identity=27.3037542662116, Blast_Score=98, Evalue=7e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005263
- InterPro:   IPR002220
- InterPro:   IPR020625
- InterPro:   IPR020624 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.52 [H]

Molecular weight: Translated: 31386; Mature: 31254

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNIHGIIGYTITPFGANGEGVDLPALGRSIDRLIAGGVHAIAPLGSTGEGAYLSDAEWD
CCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCEECCCCHH
QVAEFSIKHVAKRVPTVVSVSDLTTAKAVRRARFAEAHGADVVMVLPTSYWKLTEAEILA
HHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHH
HYRAIGDSIGVPIMLYNNPATSGTDMSVELILRIVNGVENVTMVKESTGDIQRMHKLQLL
HHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHH
GEGRVPFYNGCNPLALEAFAAGAKGWCTAAPNLIPQLNLDLYEATLAGDLGKARELFYRQ
CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHH
LPLLDFILKGGLPATIKAGLRLTGLEVGDPRLPVFPLAEAGRTQLQALLYTLR
HHHHHHHHHCCCCHHHHCCEEEEEEECCCCCCCEEECCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SNIHGIIGYTITPFGANGEGVDLPALGRSIDRLIAGGVHAIAPLGSTGEGAYLSDAEWD
CCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCEECCCCHH
QVAEFSIKHVAKRVPTVVSVSDLTTAKAVRRARFAEAHGADVVMVLPTSYWKLTEAEILA
HHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHH
HYRAIGDSIGVPIMLYNNPATSGTDMSVELILRIVNGVENVTMVKESTGDIQRMHKLQLL
HHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHH
GEGRVPFYNGCNPLALEAFAAGAKGWCTAAPNLIPQLNLDLYEATLAGDLGKARELFYRQ
CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHH
LPLLDFILKGGLPATIKAGLRLTGLEVGDPRLPVFPLAEAGRTQLQALLYTLR
HHHHHHHHHCCCCHHHHCCEEEEEEECCCCCCCEEECCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA