| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77457477
Identifier: 77457477
GI number: 77457477
Start: 1420476
End: 1422677
Strand: Reverse
Name: 77457477
Synonym: Pfl01_1250
Alternate gene names: NA
Gene position: 1422677-1420476 (Counterclockwise)
Preceding gene: 77457479
Following gene: 77457475
Centisome position: 22.1
GC content: 58.13
Gene sequence:
>2202_bases ATGACTTCTAAAAACAATCCGGCCACTGCGGTATCCGATCTGACTCTGAGCCCAGCGGCGAACAGCCCTGCCCCGATGAA GCCATTGCCACCCTCGCGTCCGCTGGGCACCCAGCAATACCTGTACTTCACCGAAACCAATACCGACCGCATCCTCGACA ACCTTGATGGCCTGCGTGACCTGGTATTCCCGCGCCCGCCGCACCTGGAAGGCGACAACGAACAGCACAACGATCAGGAA TTCCCGTCGGTGTGCCTGATCGGCCTCGGTCGCTGCGGCTCCAACATCGCCCTCGACGTGGCGGAGCTGGTGTACAACGC GCGCAAGTTCTACCTCAACGAATTCAACAACGAGGATCGCGCGGCTGACCGTCGCCTGGCCTCCGACAAAGGCTACAGCC CGGCCCAGTGGATCAAGCAGAATCTGCGGATCGGCCCGAACAAGTCGACCAAACCGGTGTTCCTGGTAGAACCGCTGGTG ATGCTCGGCGATCTCGACAAGGACATTGCCGGGCGTATCCGCTTCTCGCGCAAGGGCGAAAAGAGCGGTTTCCTGCGCGA CTACAGCAAGATGAAGATCATGGACTTGTCGGAAGTCCACGCCGGTGGTGCCGGTAACGCACCTATTCTCGGCCAGTATC TGGCGAAGATCATCCTGAACAAGGACACCCAGCGCTTCTCCAGCCCTGACTGGAAAATGATCCACTCGTACCTGATCGAC AGCTGCGGCATCAAGGCCAACCAGTCGCGCCTGTATTTCTCGATCTTCAGTGCCGGCGGCGGTACCGGTTCGGGCATGGC CTCGGAATTCGGCCTGGCCCAGCAGCACTCGTACATGAACAAGACGTTCGACACCAAGCCGATGGACGAGCACGACGGCA AGAGCGGTCATTCGTTCGTGTTCGAACCGATCTTCACCAGCGGCATCTGTGTGCTGCCGAACATTTCCGACCACCGCAGC GAAATGTCCGAGGCGCTGCACATCAACGCCGGTCGCCTGCTGTGCAAATACCTCTCGGAAGAATGGGATTTCTCGTACAA CTTCGCCAACGAAGACAGCAGCGAAGCCAGCGTCATGGGCCGTATCCGCCCATGGAACGCGATGATGCTGATCTCCAACG ACATCATGCGTTATGCCGAAGAGAGCGATGACGGCAACATCCAGAACATTGATGTCAATGCGATGGAGAAGCACGCCAAC CAGTACATCTCGCAGCAGATCTTCAACATTCTGACGGCCCAGGCGGTCACGACCGACTACGACCAGAACTATTTCCGCCG CGCCGGCATCGACATCGGCGAGACCATTCGCCTGGACGCCAACGACCTGTTCATGAGTCTGGCCGGCCCGGTGGCGATTG CCTACGCCGAGTCGGTAGTGCCGGAAACCCCGCCGCCGAGCAGCGACAAGTTCAAGGTGTTCGACAAAGAGCCGCAGCGC CTGAACATCGACGACCTGTTCTTCCGCTCGATCGATCTGCCGCACTTCAACAAGGTGACCCAGGCCATCGAAGGCATCAG CCTGCTGCCGATCGAGTCCAAGCGCTATCGCGCGTCGCTGGAGCAGTACAAGAATTCCGGCTACGATGCCGCCGCGCTGC ATGACCTGCACTTCTTCAAGAATTGCTCGTCGGTGGTCTCGATCGTTTCGCTGCCGAAAGACTACAAGCTGTCGTACATG GACCTGAACCGGTTGAAGACCCACCTCAACAGCCTGTTCCCCAACACCACGCTCAAGCGCTACGCGCTGGTGATCGGCGC CTCGGCCAACCTGTCGCTGACCACCCTGATCGCCAAGAGCCCGTGCCTGTCGGACGACTTCCTGACGCTGATCGTGGCGT TCATCAAGCGTTGCTTCGCCAAGACCCCGTACCGTTTCGACGAGACCCTGGACAACTCGATCCTCGATTTCATCATTCAG GAAGAGTTCGACGAGGACCGCATCGACGACCTGCTCAACGAATTCGAGAACCCGGCGAAGATCCTCGATACCAACTGGTA CGCGATCAAGCCGATGTACGAGAAGAAGTACCGCGAACTGATCAACGACAAAGAGAAGTTTGTCTCGATCAACGACATTC GCCTGTCGCGCGATTGCGTGAAGAAGTCGATCAAATACTTGCGCGAGATCTACCGTCACCGGATCGGCAAGACCAAGGTT ATTTCCCTCAATAACCACACTGGCAAGTCTTACTCGGTCTGA
Upstream 100 bases:
>100_bases GCACGGGCCAAATACGCGCAGAAAAAAGACGCGAGATTCCCATTCCGTGAGGCTCGACGACAGCGGTCGCCGACCAACCA GTCCAGGTATATGGCGCACA
Downstream 100 bases:
>100_bases CACCAGACCGAGGCGCCCCTATCGCGAACAGTTTCGCTCCCACAATGGAATGCATTTCCTGTGGGAGCGAGCCTGCTCGC GATAAGGCGCTCAAATTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 733; Mature: 732
Protein sequence:
>733_residues MTSKNNPATAVSDLTLSPAANSPAPMKPLPPSRPLGTQQYLYFTETNTDRILDNLDGLRDLVFPRPPHLEGDNEQHNDQE FPSVCLIGLGRCGSNIALDVAELVYNARKFYLNEFNNEDRAADRRLASDKGYSPAQWIKQNLRIGPNKSTKPVFLVEPLV MLGDLDKDIAGRIRFSRKGEKSGFLRDYSKMKIMDLSEVHAGGAGNAPILGQYLAKIILNKDTQRFSSPDWKMIHSYLID SCGIKANQSRLYFSIFSAGGGTGSGMASEFGLAQQHSYMNKTFDTKPMDEHDGKSGHSFVFEPIFTSGICVLPNISDHRS EMSEALHINAGRLLCKYLSEEWDFSYNFANEDSSEASVMGRIRPWNAMMLISNDIMRYAEESDDGNIQNIDVNAMEKHAN QYISQQIFNILTAQAVTTDYDQNYFRRAGIDIGETIRLDANDLFMSLAGPVAIAYAESVVPETPPPSSDKFKVFDKEPQR LNIDDLFFRSIDLPHFNKVTQAIEGISLLPIESKRYRASLEQYKNSGYDAAALHDLHFFKNCSSVVSIVSLPKDYKLSYM DLNRLKTHLNSLFPNTTLKRYALVIGASANLSLTTLIAKSPCLSDDFLTLIVAFIKRCFAKTPYRFDETLDNSILDFIIQ EEFDEDRIDDLLNEFENPAKILDTNWYAIKPMYEKKYRELINDKEKFVSINDIRLSRDCVKKSIKYLREIYRHRIGKTKV ISLNNHTGKSYSV
Sequences:
>Translated_733_residues MTSKNNPATAVSDLTLSPAANSPAPMKPLPPSRPLGTQQYLYFTETNTDRILDNLDGLRDLVFPRPPHLEGDNEQHNDQE FPSVCLIGLGRCGSNIALDVAELVYNARKFYLNEFNNEDRAADRRLASDKGYSPAQWIKQNLRIGPNKSTKPVFLVEPLV MLGDLDKDIAGRIRFSRKGEKSGFLRDYSKMKIMDLSEVHAGGAGNAPILGQYLAKIILNKDTQRFSSPDWKMIHSYLID SCGIKANQSRLYFSIFSAGGGTGSGMASEFGLAQQHSYMNKTFDTKPMDEHDGKSGHSFVFEPIFTSGICVLPNISDHRS EMSEALHINAGRLLCKYLSEEWDFSYNFANEDSSEASVMGRIRPWNAMMLISNDIMRYAEESDDGNIQNIDVNAMEKHAN QYISQQIFNILTAQAVTTDYDQNYFRRAGIDIGETIRLDANDLFMSLAGPVAIAYAESVVPETPPPSSDKFKVFDKEPQR LNIDDLFFRSIDLPHFNKVTQAIEGISLLPIESKRYRASLEQYKNSGYDAAALHDLHFFKNCSSVVSIVSLPKDYKLSYM DLNRLKTHLNSLFPNTTLKRYALVIGASANLSLTTLIAKSPCLSDDFLTLIVAFIKRCFAKTPYRFDETLDNSILDFIIQ EEFDEDRIDDLLNEFENPAKILDTNWYAIKPMYEKKYRELINDKEKFVSINDIRLSRDCVKKSIKYLREIYRHRIGKTKV ISLNNHTGKSYSV >Mature_732_residues TSKNNPATAVSDLTLSPAANSPAPMKPLPPSRPLGTQQYLYFTETNTDRILDNLDGLRDLVFPRPPHLEGDNEQHNDQEF PSVCLIGLGRCGSNIALDVAELVYNARKFYLNEFNNEDRAADRRLASDKGYSPAQWIKQNLRIGPNKSTKPVFLVEPLVM LGDLDKDIAGRIRFSRKGEKSGFLRDYSKMKIMDLSEVHAGGAGNAPILGQYLAKIILNKDTQRFSSPDWKMIHSYLIDS CGIKANQSRLYFSIFSAGGGTGSGMASEFGLAQQHSYMNKTFDTKPMDEHDGKSGHSFVFEPIFTSGICVLPNISDHRSE MSEALHINAGRLLCKYLSEEWDFSYNFANEDSSEASVMGRIRPWNAMMLISNDIMRYAEESDDGNIQNIDVNAMEKHANQ YISQQIFNILTAQAVTTDYDQNYFRRAGIDIGETIRLDANDLFMSLAGPVAIAYAESVVPETPPPSSDKFKVFDKEPQRL NIDDLFFRSIDLPHFNKVTQAIEGISLLPIESKRYRASLEQYKNSGYDAAALHDLHFFKNCSSVVSIVSLPKDYKLSYMD LNRLKTHLNSLFPNTTLKRYALVIGASANLSLTTLIAKSPCLSDDFLTLIVAFIKRCFAKTPYRFDETLDNSILDFIIQE EFDEDRIDDLLNEFENPAKILDTNWYAIKPMYEKKYRELINDKEKFVSINDIRLSRDCVKKSIKYLREIYRHRIGKTKVI SLNNHTGKSYSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82999; Mature: 82868
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: PS00227 TUBULIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSKNNPATAVSDLTLSPAANSPAPMKPLPPSRPLGTQQYLYFTETNTDRILDNLDGLRD CCCCCCCCCEEECEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHH LVFPRPPHLEGDNEQHNDQEFPSVCLIGLGRCGSNIALDVAELVYNARKFYLNEFNNEDR HCCCCCCCCCCCCCCCCCHHCCCEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH AADRRLASDKGYSPAQWIKQNLRIGPNKSTKPVFLVEPLVMLGDLDKDIAGRIRFSRKGE HHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCEEEECHHHHHCCCCHHHHHHEEECCCCC KSGFLRDYSKMKIMDLSEVHAGGAGNAPILGQYLAKIILNKDTQRFSSPDWKMIHSYLID CCCHHHHHHHHEEEEHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHH SCGIKANQSRLYFSIFSAGGGTGSGMASEFGLAQQHSYMNKTFDTKPMDEHDGKSGHSFV HCCCCCCCCEEEEEEEECCCCCCCCCHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCEE FEPIFTSGICVLPNISDHRSEMSEALHINAGRLLCKYLSEEWDFSYNFANEDSSEASVMG EEHHHCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHEE RIRPWNAMMLISNDIMRYAEESDDGNIQNIDVNAMEKHANQYISQQIFNILTAQAVTTDY CCCCCCEEEEHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCH DQNYFRRAGIDIGETIRLDANDLFMSLAGPVAIAYAESVVPETPPPSSDKFKVFDKEPQR HHHHHHHCCCCCCCEEEECHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCC LNIDDLFFRSIDLPHFNKVTQAIEGISLLPIESKRYRASLEQYKNSGYDAAALHDLHFFK CCHHHHHHHHCCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHH NCSSVVSIVSLPKDYKLSYMDLNRLKTHLNSLFPNTTLKRYALVIGASANLSLTTLIAKS HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHEEEEEECCCCCEEEEEECCC PCLSDDFLTLIVAFIKRCFAKTPYRFDETLDNSILDFIIQEEFDEDRIDDLLNEFENPAK CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHH ILDTNWYAIKPMYEKKYRELINDKEKFVSINDIRLSRDCVKKSIKYLREIYRHRIGKTKV EECCCCEEECCHHHHHHHHHHCCHHHEEEEHHHEHHHHHHHHHHHHHHHHHHHHCCCEEE ISLNNHTGKSYSV EEECCCCCCCCCC >Mature Secondary Structure TSKNNPATAVSDLTLSPAANSPAPMKPLPPSRPLGTQQYLYFTETNTDRILDNLDGLRD CCCCCCCCEEECEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHH LVFPRPPHLEGDNEQHNDQEFPSVCLIGLGRCGSNIALDVAELVYNARKFYLNEFNNEDR HCCCCCCCCCCCCCCCCCHHCCCEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH AADRRLASDKGYSPAQWIKQNLRIGPNKSTKPVFLVEPLVMLGDLDKDIAGRIRFSRKGE HHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCEEEECHHHHHCCCCHHHHHHEEECCCCC KSGFLRDYSKMKIMDLSEVHAGGAGNAPILGQYLAKIILNKDTQRFSSPDWKMIHSYLID CCCHHHHHHHHEEEEHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHH SCGIKANQSRLYFSIFSAGGGTGSGMASEFGLAQQHSYMNKTFDTKPMDEHDGKSGHSFV HCCCCCCCCEEEEEEEECCCCCCCCCHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCEE FEPIFTSGICVLPNISDHRSEMSEALHINAGRLLCKYLSEEWDFSYNFANEDSSEASVMG EEHHHCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHEE RIRPWNAMMLISNDIMRYAEESDDGNIQNIDVNAMEKHANQYISQQIFNILTAQAVTTDY CCCCCCEEEEHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCH DQNYFRRAGIDIGETIRLDANDLFMSLAGPVAIAYAESVVPETPPPSSDKFKVFDKEPQR HHHHHHHCCCCCCCEEEECHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCC LNIDDLFFRSIDLPHFNKVTQAIEGISLLPIESKRYRASLEQYKNSGYDAAALHDLHFFK CCHHHHHHHHCCCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHH NCSSVVSIVSLPKDYKLSYMDLNRLKTHLNSLFPNTTLKRYALVIGASANLSLTTLIAKS HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHEEEEEECCCCCEEEEEECCC PCLSDDFLTLIVAFIKRCFAKTPYRFDETLDNSILDFIIQEEFDEDRIDDLLNEFENPAK CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHH ILDTNWYAIKPMYEKKYRELINDKEKFVSINDIRLSRDCVKKSIKYLREIYRHRIGKTKV EECCCCEEECCHHHHHHHHHHCCHHHEEEEHHHEHHHHHHHHHHHHHHHHHHHHCCCEEE ISLNNHTGKSYSV EEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA