| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457468
Identifier: 77457468
GI number: 77457468
Start: 1412392
End: 1413150
Strand: Reverse
Name: 77457468
Synonym: Pfl01_1241
Alternate gene names: NA
Gene position: 1413150-1412392 (Counterclockwise)
Preceding gene: 77457469
Following gene: 77457467
Centisome position: 21.95
GC content: 60.74
Gene sequence:
>759_bases ATGAGCACTCAAGCCGCATTCAGCGCAGCGTTGCTCGATATCGACCTGCCCTGCCCCGACGGCTTGTGCAGCGCCAACGG CGCCGATCCGGCCAGCCGTTTCGCGGTGTATCGCAACAATGTTCAGAGCTCGTTGATCAACGCACTGGCCGACAGTTATC CCGTGGTGGTGCAGTTGGTGGGGGACGAATTCTTTCGGGCCATGGCCGGAGTTTTTGTGCAAAGCCATCCGCCACACAGT CCGTTAATGAGCGATTACGGCAGTGAGCTGGCGGACTTCATCAGCAAGTTCGGACCTGCCGCGAGCGTTCCCTATCTGGC CGATGTCGCGCGGCTCGAACGCTTGCGCACGCAGGCCTACCACGTTGCCGATGTGTTACCCCTCAGTCAGGACCTGATCG CTGCTGTATTTGCAGATGTCGATGCACTCAACGAACTGCGTATCGGCCTGCACCCTTCGCTGCATCTGCTCGATTCAAGC TTCGCCGTGGTGGACGTCTGGGCCGCGCATCAGCACGACGCGACGCTGGCCGGGATCGATCTGCACCACGCCCAACACGC TTTGATCCTGCGCAACGGACTGGAGGTCGAGGTGTTCGCCATGGATAGCGGCGCCAGCCAGTTCATTCGCCAGCTCAAGG CCGGCCACTCACTCACGCAGGCGCTGGAATCCGCCGAGGCCTTCGACCTCAGCCAGACCCTCGCCCTGCTGATCAGTCGC CAAGTCATCACTCATTTCCATCCAAAGGTGTCGTCATGA
Upstream 100 bases:
>100_bases CGACGCTGATCGAACGGGACAATCAGGTGCCGGCCTTCAACATGCTGTTGGCGGAAGCGCAGCAGGCCGATGAGCTACTG CTGTGCGCGGGAGGTCGGCC
Downstream 100 bases:
>100_bases ACAGCCTCATTGTCCGCGCCATCGCGCTGCTGGAAAAAATCCCCCACAGTCTGATCGCTTTCATCGCGCGTTTTTCCATC GCAGCGGTGTTCTGGAAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MSTQAAFSAALLDIDLPCPDGLCSANGADPASRFAVYRNNVQSSLINALADSYPVVVQLVGDEFFRAMAGVFVQSHPPHS PLMSDYGSELADFISKFGPAASVPYLADVARLERLRTQAYHVADVLPLSQDLIAAVFADVDALNELRIGLHPSLHLLDSS FAVVDVWAAHQHDATLAGIDLHHAQHALILRNGLEVEVFAMDSGASQFIRQLKAGHSLTQALESAEAFDLSQTLALLISR QVITHFHPKVSS
Sequences:
>Translated_252_residues MSTQAAFSAALLDIDLPCPDGLCSANGADPASRFAVYRNNVQSSLINALADSYPVVVQLVGDEFFRAMAGVFVQSHPPHS PLMSDYGSELADFISKFGPAASVPYLADVARLERLRTQAYHVADVLPLSQDLIAAVFADVDALNELRIGLHPSLHLLDSS FAVVDVWAAHQHDATLAGIDLHHAQHALILRNGLEVEVFAMDSGASQFIRQLKAGHSLTQALESAEAFDLSQTLALLISR QVITHFHPKVSS >Mature_251_residues STQAAFSAALLDIDLPCPDGLCSANGADPASRFAVYRNNVQSSLINALADSYPVVVQLVGDEFFRAMAGVFVQSHPPHSP LMSDYGSELADFISKFGPAASVPYLADVARLERLRTQAYHVADVLPLSQDLIAAVFADVDALNELRIGLHPSLHLLDSSF AVVDVWAAHQHDATLAGIDLHHAQHALILRNGLEVEVFAMDSGASQFIRQLKAGHSLTQALESAEAFDLSQTLALLISRQ VITHFHPKVSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27118; Mature: 26987
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTQAAFSAALLDIDLPCPDGLCSANGADPASRFAVYRNNVQSSLINALADSYPVVVQLV CCCHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH GDEFFRAMAGVFVQSHPPHSPLMSDYGSELADFISKFGPAASVPYLADVARLERLRTQAY HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH HVADVLPLSQDLIAAVFADVDALNELRIGLHPSLHLLDSSFAVVDVWAAHQHDATLAGID HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEECCCCCCCEEEEEE LHHAQHALILRNGLEVEVFAMDSGASQFIRQLKAGHSLTQALESAEAFDLSQTLALLISR HHHHHHHHHEECCCEEEEEEECCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH QVITHFHPKVSS HHHHHHCCCCCC >Mature Secondary Structure STQAAFSAALLDIDLPCPDGLCSANGADPASRFAVYRNNVQSSLINALADSYPVVVQLV CCHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH GDEFFRAMAGVFVQSHPPHSPLMSDYGSELADFISKFGPAASVPYLADVARLERLRTQAY HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH HVADVLPLSQDLIAAVFADVDALNELRIGLHPSLHLLDSSFAVVDVWAAHQHDATLAGID HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEECCCCCCCEEEEEE LHHAQHALILRNGLEVEVFAMDSGASQFIRQLKAGHSLTQALESAEAFDLSQTLALLISR HHHHHHHHHEECCCEEEEEEECCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH QVITHFHPKVSS HHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA