| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457467
Identifier: 77457467
GI number: 77457467
Start: 1411880
End: 1412395
Strand: Reverse
Name: 77457467
Synonym: Pfl01_1240
Alternate gene names: NA
Gene position: 1412395-1411880 (Counterclockwise)
Preceding gene: 77457468
Following gene: 77457465
Centisome position: 21.94
GC content: 59.88
Gene sequence:
>516_bases ATGAACAGCCTCATTGTCCGCGCCATCGCGCTGCTGGAAAAAATCCCCCACAGTCTGATCGCTTTCATCGCGCGTTTTTC CATCGCAGCGGTGTTCTGGAAATCCGGGCAGACCAAGATCGAAGGTCTGGCCGTCGACCTGATCGATGGCACCTTCGAGT TCGGCTGGCCGCGTCTGGCCGACTCGACGATTCCACTGTTCAAGAGCGAATACCACGTGCCCCTGCTGGCGCCGGAAATC GCCGCACATCTGGCCGCGTTTGCCGAGCATTTCTTCCCGGTCCTGATCCTGATTGGCTTCGCCACGCGTTTTTCGGCACT GGCATTGCTGGGCATGACCCTGACCATTCAGCTGTTCGTGTATCCGGATGCGTACCCGACCCACGGCACCTGGATGGCGG TGTTGCTGTACCTGATGGCGACCGGGCCAGGCAAACTGTCGATCGATCACCTGATCGCCAGGCACTACAACCGGTCCAGC GCCTCGCCGCTGAGCTTGAACCAGCCGATCAGGTAA
Upstream 100 bases:
>100_bases CGCAGGCGCTGGAATCCGCCGAGGCCTTCGACCTCAGCCAGACCCTCGCCCTGCTGATCAGTCGCCAAGTCATCACTCAT TTCCATCCAAAGGTGTCGTC
Downstream 100 bases:
>100_bases TCTGCCAGCACCTGGGTGCGTTTCGGTAGACCGCCCTGATACGGGTGCACCAGATACATCGGCATGCGTCGGGTCTGAAA ATCGCGAAGGAGCCAGCGCA
Product: DoxX
Products: NA
Alternate protein names: Transmembrane Protein; ThiosulphateQuinone Oxidoreductase; Integral Membrane Protein
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MNSLIVRAIALLEKIPHSLIAFIARFSIAAVFWKSGQTKIEGLAVDLIDGTFEFGWPRLADSTIPLFKSEYHVPLLAPEI AAHLAAFAEHFFPVLILIGFATRFSALALLGMTLTIQLFVYPDAYPTHGTWMAVLLYLMATGPGKLSIDHLIARHYNRSS ASPLSLNQPIR
Sequences:
>Translated_171_residues MNSLIVRAIALLEKIPHSLIAFIARFSIAAVFWKSGQTKIEGLAVDLIDGTFEFGWPRLADSTIPLFKSEYHVPLLAPEI AAHLAAFAEHFFPVLILIGFATRFSALALLGMTLTIQLFVYPDAYPTHGTWMAVLLYLMATGPGKLSIDHLIARHYNRSS ASPLSLNQPIR >Mature_171_residues MNSLIVRAIALLEKIPHSLIAFIARFSIAAVFWKSGQTKIEGLAVDLIDGTFEFGWPRLADSTIPLFKSEYHVPLLAPEI AAHLAAFAEHFFPVLILIGFATRFSALALLGMTLTIQLFVYPDAYPTHGTWMAVLLYLMATGPGKLSIDHLIARHYNRSS ASPLSLNQPIR
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18888; Mature: 18888
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSLIVRAIALLEKIPHSLIAFIARFSIAAVFWKSGQTKIEGLAVDLIDGTFEFGWPRLA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHEEEEEECCCHHCCCCCCC DSTIPLFKSEYHVPLLAPEIAAHLAAFAEHFFPVLILIGFATRFSALALLGMTLTIQLFV CCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE YPDAYPTHGTWMAVLLYLMATGPGKLSIDHLIARHYNRSSASPLSLNQPIR CCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MNSLIVRAIALLEKIPHSLIAFIARFSIAAVFWKSGQTKIEGLAVDLIDGTFEFGWPRLA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHEEEEEECCCHHCCCCCCC DSTIPLFKSEYHVPLLAPEIAAHLAAFAEHFFPVLILIGFATRFSALALLGMTLTIQLFV CCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEE YPDAYPTHGTWMAVLLYLMATGPGKLSIDHLIARHYNRSSASPLSLNQPIR CCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA