| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457324
Identifier: 77457324
GI number: 77457324
Start: 1269016
End: 1269750
Strand: Reverse
Name: 77457324
Synonym: Pfl01_1097
Alternate gene names: NA
Gene position: 1269750-1269016 (Counterclockwise)
Preceding gene: 77457325
Following gene: 77457323
Centisome position: 19.72
GC content: 49.93
Gene sequence:
>735_bases ATGAAAGAACTTCTGGATTGCCAACTGATTCAATGGCCTGACAACCAGGCGGCTTACATCGCCGCCATCAACGAGAACCC GGCGAATGCCGGCACCCAAAGCACAGCAGGCTCTCGCCGCAAACGCTCTGTGGTCAACTATTCGAAACTCTGGGCAAATG GCCGAACATTGAAAATTGCTTTCATGGACGCACCCGACGCCGATCATAAGACAAGGATTATCAACGCGGCTCGTAAATGG CTGGCTTATATCAACCTGACATTCGAATTCGTCGAAGATCTGAAAGGCGATATTCGCATCGCAACCCGAAACAATGACAA CAGTTCAATGCTGGGTACCGATGCCCTGTTGATACATCCCGACCATCCAACGATGAATCTGGGCGTCAAACCAGAGCATC CCGATTTCGAGACCATCGTGATCCACGAGTTCGGCCATGCACTGGGCGCCCTGCATGAACATCAGCACCCTCAAGCCAAT ATTCCGTGGGACAAACCCAAGGTTTACGAGTTTTACCGGAATCGGGAAATGAATCCGCTGACTCACGAACAGGTCGACCG CAACCTGTTCGCGACCTTCGATACGCTGGATGCGATTTATACGAACTACGACAGGCGATCGATCATGCATCATCCTGTAT CGAACGATTTGACCATCGGCAACTGGGAAGTACCGACAAACCGCAAGATCAGTAAAAAAGACAAACAATTGATGAAGCTG CTTTATCCAAAATAA
Upstream 100 bases:
>100_bases TTTTGTACCCCACCTTTACGCTGGCCCGACGTTAGTCTTGAGTCGCGTCATTCTGCGCATCACCCAAAATCAATCTGCAA CTTCATGGAAGAAGTAAATA
Downstream 100 bases:
>100_bases TTCGGACATTTCAAACTAAAAAGTTTGCCAGGTGCAACGCCTGGCAAACTTGAATTGAAAACACACAACCTTACATCAAA CAACTTTCACAAACTAACAT
Product: hypothetical protein
Products: NA
Alternate protein names: Regulatory Protein; Peptidase Metallopeptidase; Peptidase Domain-Containing Protein; Peptidase Domain Protein; Matrixin Family
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MKELLDCQLIQWPDNQAAYIAAINENPANAGTQSTAGSRRKRSVVNYSKLWANGRTLKIAFMDAPDADHKTRIINAARKW LAYINLTFEFVEDLKGDIRIATRNNDNSSMLGTDALLIHPDHPTMNLGVKPEHPDFETIVIHEFGHALGALHEHQHPQAN IPWDKPKVYEFYRNREMNPLTHEQVDRNLFATFDTLDAIYTNYDRRSIMHHPVSNDLTIGNWEVPTNRKISKKDKQLMKL LYPK
Sequences:
>Translated_244_residues MKELLDCQLIQWPDNQAAYIAAINENPANAGTQSTAGSRRKRSVVNYSKLWANGRTLKIAFMDAPDADHKTRIINAARKW LAYINLTFEFVEDLKGDIRIATRNNDNSSMLGTDALLIHPDHPTMNLGVKPEHPDFETIVIHEFGHALGALHEHQHPQAN IPWDKPKVYEFYRNREMNPLTHEQVDRNLFATFDTLDAIYTNYDRRSIMHHPVSNDLTIGNWEVPTNRKISKKDKQLMKL LYPK >Mature_244_residues MKELLDCQLIQWPDNQAAYIAAINENPANAGTQSTAGSRRKRSVVNYSKLWANGRTLKIAFMDAPDADHKTRIINAARKW LAYINLTFEFVEDLKGDIRIATRNNDNSSMLGTDALLIHPDHPTMNLGVKPEHPDFETIVIHEFGHALGALHEHQHPQAN IPWDKPKVYEFYRNREMNPLTHEQVDRNLFATFDTLDAIYTNYDRRSIMHHPVSNDLTIGNWEVPTNRKISKKDKQLMKL LYPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28123; Mature: 28123
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKELLDCQLIQWPDNQAAYIAAINENPANAGTQSTAGSRRKRSVVNYSKLWANGRTLKIA CCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEE FMDAPDADHKTRIINAARKWLAYINLTFEFVEDLKGDIRIATRNNDNSSMLGTDALLIHP EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEECCCEEEEEC DHPTMNLGVKPEHPDFETIVIHEFGHALGALHEHQHPQANIPWDKPKVYEFYRNREMNPL CCCCEECCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCC THEQVDRNLFATFDTLDAIYTNYDRRSIMHHPVSNDLTIGNWEVPTNRKISKKDKQLMKL CHHHHCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEECCEECCCCCCCCHHHHHHHHH LYPK HCCC >Mature Secondary Structure MKELLDCQLIQWPDNQAAYIAAINENPANAGTQSTAGSRRKRSVVNYSKLWANGRTLKIA CCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEE FMDAPDADHKTRIINAARKWLAYINLTFEFVEDLKGDIRIATRNNDNSSMLGTDALLIHP EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEECCCEEEEEC DHPTMNLGVKPEHPDFETIVIHEFGHALGALHEHQHPQANIPWDKPKVYEFYRNREMNPL CCCCEECCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCC THEQVDRNLFATFDTLDAIYTNYDRRSIMHHPVSNDLTIGNWEVPTNRKISKKDKQLMKL CHHHHCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEECCEECCCCCCCCHHHHHHHHH LYPK HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA