| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457320
Identifier: 77457320
GI number: 77457320
Start: 1264896
End: 1265930
Strand: Reverse
Name: 77457320
Synonym: Pfl01_1093
Alternate gene names: NA
Gene position: 1265930-1264896 (Counterclockwise)
Preceding gene: 77457321
Following gene: 77457319
Centisome position: 19.66
GC content: 62.51
Gene sequence:
>1035_bases ATGTCCAACTCCCTGTTCAGTATCGCCTTCGGCGTCGGCACCCAGAACCGTCAAGGCGCATGGCTGGAAGTGTTCTACGC CCAGCCGCTGCTCAATCCTTCGGCTGAACTGGTCGCCGCTGTTGCCCCGATCCTCGGCTACACCGAAGGCAACCAGGCCA TCACCTTCACCACCGCACAGGCTGCGCAACTGGCTGAAGCCGTGAAAGGCATCGACGCGGTACAAGGCAAACTGCTGACC CGTCTGGCTGAAAGCCACAAGCCACTGGTCGCCACCCTGCTGGCCGAAGACGCTCAGTTGACCTCGACTCCTGAGGCTTA TCTGAAGCTGCACTTGCTGTCCCATCGTCTGGTCAAGCCGCACGGCGTGAGCCTGGCCGGGATCTTCCCGCTGCTGCCAA ACGTGGCATGGACCAGCCAGGGCGCCATCGACCTGAGCGAACTGGCCGAGCTGCAACTCGAAGCCCGTCTGCGTGGCGAA CTGCTGGAAGTGTTCTCGGTGGACAAATTCCCGAAAATGACCGACTACGTGGTACCGGCCGGCGTGCGTATCGCTGACGC CGCGCGTCTGCGTCTGGGCGCCTACGTGGGCGAAGGCACCACCGTGATGCACGAAGGCTTCATCAACTTCAACGCCGGCA CCGAAGGCCCGGGCATGATCGAAGGCCGCGTTTCCGCTGGCGTATTCGTCGGCAAGGGCTCGGACCTGGGCGGCGGCTGC TCGACCATGGGCACCCTGTCGGGCGGCGGCAACATCGTGATCAAGGTCGGCGAAGGCTGCCTGATCGGCGCCAACGCCGG TATCGGTATCCCGTTGGGCGACCGCAACACCGTCGAGTCGGGCCTGTACGTGACCGCCGGCACCAAAGTCGCACTGCTGG ACGAGAACAACAATCTGGTCAAAGTGGTCAAGGCCCGTGAACTGGCCGGTCAGACCGACCTGCTGTTCCGTCGCAATTCG GAAACCGGTGCCGTGGAATGCAAAACCCACAAATCGGCGATCGAACTGAACGAAGCACTGCACGCTCACAACTAA
Upstream 100 bases:
>100_bases GTGCTCGATCTCGGTGACCGAACCCTGATTGGCTTCAAGCCAGACATCTACGCGGCCGCCCTCAAGTAAGCAGCCCGTCA CATTTTGTAGAGGTATTCAC
Downstream 100 bases:
>100_bases GCGCCAGAAGCTCACCTGAGGGAGCCAGCCTGTTTGCGATGGCGTTCGACCGATCGTCATCGCGGGCAAGCCCGCTCCCA CAGGGTTCGGCGTTAACCCG
Product: 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase
Products: CoA; (R)-2-(succinylamino)-6-oxoheptanedioate
Alternate protein names: Transferase; Tetrahydrodipicolinate Succinylase; Tetrahydropicolinate Succinylase; Tetrahydrodipicolinate N- Succinyltransferase; Succinyltransferase; Transferase Hexapeptide Repeat Containing Protein; Succinyl-Transferase; Lysine Biosynthesis-Like Protein; Transferase Tetrahydrodipicolinate N-Succinyltransferase; Tranferase; Tetrahydrodipicolinate N-Succinyltransferase-Like Protein
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MSNSLFSIAFGVGTQNRQGAWLEVFYAQPLLNPSAELVAAVAPILGYTEGNQAITFTTAQAAQLAEAVKGIDAVQGKLLT RLAESHKPLVATLLAEDAQLTSTPEAYLKLHLLSHRLVKPHGVSLAGIFPLLPNVAWTSQGAIDLSELAELQLEARLRGE LLEVFSVDKFPKMTDYVVPAGVRIADAARLRLGAYVGEGTTVMHEGFINFNAGTEGPGMIEGRVSAGVFVGKGSDLGGGC STMGTLSGGGNIVIKVGEGCLIGANAGIGIPLGDRNTVESGLYVTAGTKVALLDENNNLVKVVKARELAGQTDLLFRRNS ETGAVECKTHKSAIELNEALHAHN
Sequences:
>Translated_344_residues MSNSLFSIAFGVGTQNRQGAWLEVFYAQPLLNPSAELVAAVAPILGYTEGNQAITFTTAQAAQLAEAVKGIDAVQGKLLT RLAESHKPLVATLLAEDAQLTSTPEAYLKLHLLSHRLVKPHGVSLAGIFPLLPNVAWTSQGAIDLSELAELQLEARLRGE LLEVFSVDKFPKMTDYVVPAGVRIADAARLRLGAYVGEGTTVMHEGFINFNAGTEGPGMIEGRVSAGVFVGKGSDLGGGC STMGTLSGGGNIVIKVGEGCLIGANAGIGIPLGDRNTVESGLYVTAGTKVALLDENNNLVKVVKARELAGQTDLLFRRNS ETGAVECKTHKSAIELNEALHAHN >Mature_343_residues SNSLFSIAFGVGTQNRQGAWLEVFYAQPLLNPSAELVAAVAPILGYTEGNQAITFTTAQAAQLAEAVKGIDAVQGKLLTR LAESHKPLVATLLAEDAQLTSTPEAYLKLHLLSHRLVKPHGVSLAGIFPLLPNVAWTSQGAIDLSELAELQLEARLRGEL LEVFSVDKFPKMTDYVVPAGVRIADAARLRLGAYVGEGTTVMHEGFINFNAGTEGPGMIEGRVSAGVFVGKGSDLGGGCS TMGTLSGGGNIVIKVGEGCLIGANAGIGIPLGDRNTVESGLYVTAGTKVALLDENNNLVKVVKARELAGQTDLLFRRNSE TGAVECKTHKSAIELNEALHAHN
Specific function: Unknown
COG id: COG2171
COG function: function code E; Tetrahydrodipicolinate N-succinyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.117
Molecular weight: Translated: 36066; Mature: 35935
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSLFSIAFGVGTQNRQGAWLEVFYAQPLLNPSAELVAAVAPILGYTEGNQAITFTTAQ CCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEHHH AAQLAEAVKGIDAVQGKLLTRLAESHKPLVATLLAEDAQLTSTPEAYLKLHLLSHRLVKP HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHCCCCCCCCCHHHHHHHHHHHHHCCC HGVSLAGIFPLLPNVAWTSQGAIDLSELAELQLEARLRGELLEVFSVDKFPKMTDYVVPA CCCCCEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCC GVRIADAARLRLGAYVGEGTTVMHEGFINFNAGTEGPGMIEGRVSAGVFVGKGSDLGGGC CCEEHHHHHEEEEEEECCCEEEEEECEEEECCCCCCCCEEEEEEECEEEEECCCCCCCCC STMGTLSGGGNIVIKVGEGCLIGANAGIGIPLGDRNTVESGLYVTAGTKVALLDENNNLV CCCEEECCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCEE KVVKARELAGQTDLLFRRNSETGAVECKTHKSAIELNEALHAHN EEEEHHHHCCCCEEEEEECCCCCEEEEECCHHHHHHHHHHHCCC >Mature Secondary Structure SNSLFSIAFGVGTQNRQGAWLEVFYAQPLLNPSAELVAAVAPILGYTEGNQAITFTTAQ CCCEEEEEEECCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEHHH AAQLAEAVKGIDAVQGKLLTRLAESHKPLVATLLAEDAQLTSTPEAYLKLHLLSHRLVKP HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHCCCCCCCCCHHHHHHHHHHHHHCCC HGVSLAGIFPLLPNVAWTSQGAIDLSELAELQLEARLRGELLEVFSVDKFPKMTDYVVPA CCCCCEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCC GVRIADAARLRLGAYVGEGTTVMHEGFINFNAGTEGPGMIEGRVSAGVFVGKGSDLGGGC CCEEHHHHHEEEEEEECCCEEEEEECEEEECCCCCCCCEEEEEEECEEEEECCCCCCCCC STMGTLSGGGNIVIKVGEGCLIGANAGIGIPLGDRNTVESGLYVTAGTKVALLDENNNLV CCCEEECCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCEE KVVKARELAGQTDLLFRRNSETGAVECKTHKSAIELNEALHAHN EEEEHHHHCCCCEEEEEECCCCCEEEEECCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: succinyl-CoA; (R)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate; H2O
Specific reaction: succinyl-CoA + (R)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate + H2O = CoA + (R)-2-(succinylamino)-6-oxoheptanedioate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA