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The map label for this gene is yagE [C]

Identifier: 77457054

GI number: 77457054

Start: 974346

End: 975257

Strand: Direct

Name: yagE [C]

Synonym: Pfl01_0827

Alternate gene names: 77457054

Gene position: 974346-975257 (Clockwise)

Preceding gene: 77457050

Following gene: 77457055

Centisome position: 15.13

GC content: 62.39

Gene sequence:

>912_bases
ATGAATCCACAAGAACTGAAGTCCATCCTCTCCGCCGGCCTGCTGTCGTTCCCGGTGACCGATTTCAATGCCCAGGGCGA
TTTCAACCGCGCTGGCTACATCAAACGCCTGGAATGGCTGGCCCCGTACGGTGCTTCAGCCCTGTTCGCCGCCGGTGGCA
CCGGTGAATTCTTCTCCCTGGCTGCCAGCGAATACTCGGAAATCATCAAGACTGCCGTCGACACTTGCGCCAGCAGCGTG
CCGATCCTCGCCGGTGTCGGCGGTTCGACCCGTCAGGCCATCGAATACGCTCAGGAAGCCGAGCGTCTGGGCGCCAAAGG
CCTGTTGTTGCTGCCGCACTATCTGACCGAAGCCAGCCAGGACGGCGTTGCCGCCCACGTTGAAGCGGTGTGCAAATCGG
TCAACATCGGCGTGGTGGTCTACAACCGCAACGTCTGCCGCCTGACTGCGCCGCTGCTGGAGCGTCTGGCCGAGCGCTGC
CCGAACCTGATCGGTTACAAGGACGGTCTGGGCGATATCGAACTGATGGTGTCGATCCGTCGTCGCCTCGGCGATCGCTT
CAGCTACCTCGGTGGTCTGCCGACCGCCGAAGTCTACGCCGCTGCCTACAAGGCCCTGGGCGTGCCGGTCTACTCGTCGG
CGGTGTTCAACTTCATCCCGAAAACCGCGATGGACTTCTACCACGCCATTGCCCGCGAAGATCACGCCACCGTCGGCAAG
ATCATCGACGACTTCTTCCTGCCGTACCTCGACATCCGCAACCGCAAGGCCGGTTACGCCGTGAGCATCGTCAAGGCTGG
CGCCAAGATCGCCGGTTATGACGCCGGCCCGGTGCGTGCGCCGCTGACCGACTTGACCGGCGAAGAGTACGAAATGCTCG
CTGCGCTGATCGACAAGCAAGGTGCGCAGTAA

Upstream 100 bases:

>100_bases
GCAGTTGACGGTTATATTTTAAGTTGTACGATGACCTACAACTTCGGCGAAGGCTGAACGGTCCACTCACAAAAAACGTT
GCTACCAGGGTGTTCGAATA

Downstream 100 bases:

>100_bases
CACACCTCTATAAACAAGGCCGCTGAGCAATCAGCGGCTTTTTGCGTCAGGAGAATGATTCGTGACCAAGCGCTATGACA
ACTACATCAACGGTGAATGG

Product: 5-dehydro-4-deoxyglucarate dehydratase

Products: NA

Alternate protein names: 5-keto-4-deoxy-glucarate dehydratase; KDGDH [H]

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MNPQELKSILSAGLLSFPVTDFNAQGDFNRAGYIKRLEWLAPYGASALFAAGGTGEFFSLAASEYSEIIKTAVDTCASSV
PILAGVGGSTRQAIEYAQEAERLGAKGLLLLPHYLTEASQDGVAAHVEAVCKSVNIGVVVYNRNVCRLTAPLLERLAERC
PNLIGYKDGLGDIELMVSIRRRLGDRFSYLGGLPTAEVYAAAYKALGVPVYSSAVFNFIPKTAMDFYHAIAREDHATVGK
IIDDFFLPYLDIRNRKAGYAVSIVKAGAKIAGYDAGPVRAPLTDLTGEEYEMLAALIDKQGAQ

Sequences:

>Translated_303_residues
MNPQELKSILSAGLLSFPVTDFNAQGDFNRAGYIKRLEWLAPYGASALFAAGGTGEFFSLAASEYSEIIKTAVDTCASSV
PILAGVGGSTRQAIEYAQEAERLGAKGLLLLPHYLTEASQDGVAAHVEAVCKSVNIGVVVYNRNVCRLTAPLLERLAERC
PNLIGYKDGLGDIELMVSIRRRLGDRFSYLGGLPTAEVYAAAYKALGVPVYSSAVFNFIPKTAMDFYHAIAREDHATVGK
IIDDFFLPYLDIRNRKAGYAVSIVKAGAKIAGYDAGPVRAPLTDLTGEEYEMLAALIDKQGAQ
>Mature_303_residues
MNPQELKSILSAGLLSFPVTDFNAQGDFNRAGYIKRLEWLAPYGASALFAAGGTGEFFSLAASEYSEIIKTAVDTCASSV
PILAGVGGSTRQAIEYAQEAERLGAKGLLLLPHYLTEASQDGVAAHVEAVCKSVNIGVVVYNRNVCRLTAPLLERLAERC
PNLIGYKDGLGDIELMVSIRRRLGDRFSYLGGLPTAEVYAAAYKALGVPVYSSAVFNFIPKTAMDFYHAIAREDHATVGK
IIDDFFLPYLDIRNRKAGYAVSIVKAGAKIAGYDAGPVRAPLTDLTGEEYEMLAALIDKQGAQ

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Escherichia coli, GI1786463, Length=227, Percent_Identity=28.6343612334802, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1788823, Length=289, Percent_Identity=26.2975778546713, Blast_Score=85, Evalue=7e-18,
Organism=Escherichia coli, GI87082415, Length=237, Percent_Identity=24.8945147679325, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR017655
- InterPro:   IPR002220 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.41 [H]

Molecular weight: Translated: 32557; Mature: 32557

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPQELKSILSAGLLSFPVTDFNAQGDFNRAGYIKRLEWLAPYGASALFAAGGTGEFFSL
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCHHHHH
AASEYSEIIKTAVDTCASSVPILAGVGGSTRQAIEYAQEAERLGAKGLLLLPHYLTEASQ
HHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCC
DGVAAHVEAVCKSVNIGVVVYNRNVCRLTAPLLERLAERCPNLIGYKDGLGDIELMVSIR
CCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHH
RRLGDRFSYLGGLPTAEVYAAAYKALGVPVYSSAVFNFIPKTAMDFYHAIAREDHATVGK
HHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
IIDDFFLPYLDIRNRKAGYAVSIVKAGAKIAGYDAGPVRAPLTDLTGEEYEMLAALIDKQ
HHHHHHHHHHHHCCCCCCCEEHHHHCCCCEECCCCCCCCCCHHHCCCHHHHHHHHHHHHC
GAQ
CCC
>Mature Secondary Structure
MNPQELKSILSAGLLSFPVTDFNAQGDFNRAGYIKRLEWLAPYGASALFAAGGTGEFFSL
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCHHHHH
AASEYSEIIKTAVDTCASSVPILAGVGGSTRQAIEYAQEAERLGAKGLLLLPHYLTEASQ
HHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCC
DGVAAHVEAVCKSVNIGVVVYNRNVCRLTAPLLERLAERCPNLIGYKDGLGDIELMVSIR
CCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHH
RRLGDRFSYLGGLPTAEVYAAAYKALGVPVYSSAVFNFIPKTAMDFYHAIAREDHATVGK
HHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
IIDDFFLPYLDIRNRKAGYAVSIVKAGAKIAGYDAGPVRAPLTDLTGEEYEMLAALIDKQ
HHHHHHHHHHHHCCCCCCCEEHHHHCCCCEECCCCCCCCCCHHHCCCHHHHHHHHHHHHC
GAQ
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA