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The map label for this gene is ydfF [H]

Identifier: 77456897

GI number: 77456897

Start: 782968

End: 783702

Strand: Direct

Name: ydfF [H]

Synonym: Pfl01_0669

Alternate gene names: 77456897

Gene position: 782968-783702 (Clockwise)

Preceding gene: 77456896

Following gene: 77456898

Centisome position: 12.16

GC content: 65.99

Gene sequence:

>735_bases
ATGGAACATGCACCTTGCATCAGCCAGATCGCCACGTTGCTGGCCGATCCCAAACGCAGCGCAATGATGTGGGCGCTCAT
GGATGGCTCGGCGCGGCAGACCGAGGAACTGGCGTTGCTGGCGGGGCTTTCTCCGTCGTCAGCCAGTGCGCATCTGGGGC
GCTTGTCCGCTGGCGGTCTGTTGAAGGTCGAGGCGCGCGGCCGCAAACGCTTCTTCCGCCTGGCGGCGCCCGAAATCGGT
GCGGCCATCGAAGCCCTGGCCAGCGCCACTCTGGCCAGCGCTCCGCGAGAAATCCCTGCCGTGTTCAAGCGTGCCTCGCC
GGCCGTCAGACCCCAGGCCGCCCCCTCGTCACTGCTGCGCGCCCGGTTTTGCGACGACCATCTGGGGGGAACGCTGGCCG
CCGACCTGTACCAGCGACTGCTCGACGCCGGCTGGATCGAGCAGCTTGAAAACCGGGTGGTCGTGACGCACAAAGGCTCG
ACACAATTGGCTGGGCGCGGTGTGTACATCCAGGCGCTGGCCCATCGCAACGTCCAGGTGGCGTGTGCCTGCCCGGACTG
GAGCGAGCGTCGCCCGCACATGGGCGGATCACTGGGGGCGGCATTGCTGCAGTTGTTCATGCAGTCGGGGTGGCTGGTGC
TGCCCAACGATTCCCGTGCCCTGCAATTGACGGCGGCGGGCCAGCGGGAAATTCATCGATTTGCCTGTGAAACCGAGCTG
GAAATGGCGTTGTAG

Upstream 100 bases:

>100_bases
CGCTTCGGCTCAAGGTCTTTTGCGCGCCTTGGCCGACGACTGATTACTGGTCAAGATGTCTATGAGCTGTAGACGATACG
ATTCAACAGGGAGTGAATAG

Downstream 100 bases:

>100_bases
AGCGTTCTCTTCCACTGATGTGCTACTGGCGTCGCCAACGGCTGCGAACACGTCGCATCTGGCACAGGCGCGCAACCGCT
ATCGCGCACACTCGATCCGG

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MEHAPCISQIATLLADPKRSAMMWALMDGSARQTEELALLAGLSPSSASAHLGRLSAGGLLKVEARGRKRFFRLAAPEIG
AAIEALASATLASAPREIPAVFKRASPAVRPQAAPSSLLRARFCDDHLGGTLAADLYQRLLDAGWIEQLENRVVVTHKGS
TQLAGRGVYIQALAHRNVQVACACPDWSERRPHMGGSLGAALLQLFMQSGWLVLPNDSRALQLTAAGQREIHRFACETEL
EMAL

Sequences:

>Translated_244_residues
MEHAPCISQIATLLADPKRSAMMWALMDGSARQTEELALLAGLSPSSASAHLGRLSAGGLLKVEARGRKRFFRLAAPEIG
AAIEALASATLASAPREIPAVFKRASPAVRPQAAPSSLLRARFCDDHLGGTLAADLYQRLLDAGWIEQLENRVVVTHKGS
TQLAGRGVYIQALAHRNVQVACACPDWSERRPHMGGSLGAALLQLFMQSGWLVLPNDSRALQLTAAGQREIHRFACETEL
EMAL
>Mature_244_residues
MEHAPCISQIATLLADPKRSAMMWALMDGSARQTEELALLAGLSPSSASAHLGRLSAGGLLKVEARGRKRFFRLAAPEIG
AAIEALASATLASAPREIPAVFKRASPAVRPQAAPSSLLRARFCDDHLGGTLAADLYQRLLDAGWIEQLENRVVVTHKGS
TQLAGRGVYIQALAHRNVQVACACPDWSERRPHMGGSLGAALLQLFMQSGWLVLPNDSRALQLTAAGQREIHRFACETEL
EMAL

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 26194; Mature: 26194

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHAPCISQIATLLADPKRSAMMWALMDGSARQTEELALLAGLSPSSASAHLGRLSAGGL
CCCCHHHHHHHHHHCCCCHHHEEEEEECCCCCHHHHHHHEECCCCCCCHHHHCCCCCCCE
LKVEARGRKRFFRLAAPEIGAAIEALASATLASAPREIPAVFKRASPAVRPQAAPSSLLR
EEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHH
ARFCDDHLGGTLAADLYQRLLDAGWIEQLENRVVVTHKGSTQLAGRGVYIQALAHRNVQV
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEECCCEEE
ACACPDWSERRPHMGGSLGAALLQLFMQSGWLVLPNDSRALQLTAAGQREIHRFACETEL
EEECCCHHHCCCCCCCHHHHHHHHHHHHCCCEEEECCCCEEEEEECCHHHHHHHHHHCHH
EMAL
HHCC
>Mature Secondary Structure
MEHAPCISQIATLLADPKRSAMMWALMDGSARQTEELALLAGLSPSSASAHLGRLSAGGL
CCCCHHHHHHHHHHCCCCHHHEEEEEECCCCCHHHHHHHEECCCCCCCHHHHCCCCCCCE
LKVEARGRKRFFRLAAPEIGAAIEALASATLASAPREIPAVFKRASPAVRPQAAPSSLLR
EEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHH
ARFCDDHLGGTLAADLYQRLLDAGWIEQLENRVVVTHKGSTQLAGRGVYIQALAHRNVQV
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEECCCEEE
ACACPDWSERRPHMGGSLGAALLQLFMQSGWLVLPNDSRALQLTAAGQREIHRFACETEL
EEECCCHHHCCCCCCCHHHHHHHHHHHHCCCEEEECCCCEEEEEECCHHHHHHHHHHCHH
EMAL
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]