| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456823
Identifier: 77456823
GI number: 77456823
Start: 687960
End: 689339
Strand: Reverse
Name: 77456823
Synonym: Pfl01_0595
Alternate gene names: NA
Gene position: 689339-687960 (Counterclockwise)
Preceding gene: 77456824
Following gene: 77456822
Centisome position: 10.71
GC content: 63.12
Gene sequence:
>1380_bases ATGAAACAGCCCAAACCGAATTTCTACAACCTGGCCTGGCGTTGGCATTTCTATGCCGGATTGTTCGTCGCGCCATTCAT GGTGATGCTGGCCCTGACCGGCATCATTTACCTGTTCAAACCGCAGCTCGATTCGCTGATGTACAGCAGCCTGCTGAACG TCCCCGCCGGGCATCACACGGTGCCGGCCGACGACTTGCTGCAAAAGGTCAAAAGCGCTTATCCACAGGGCCAGGTCACC CAGTACCTGCCGCCGGTAAATGCCGAGCGCAGCGCGCAGTTTGTCGTGGCCAATGCCGGCCATGAGCTGAACGTGTTCGT CGATCCGTACCACGGCGACATCCTTGGCGAGCAGGATGCCAAGCAGAACCTGCAAGCCATCGCCCGGGCGATTCACGGCG AGTTGATGATCGGCACCGTCGGTGACCGACTGATCGAAATGGCCGCCGGCTGGGGCGTGGTGCTGGTGGTGTCCGGGGTT TTCCTGTGGTGGCCGCGAGGTCAGGCAGCGGGGATTCTGTGGCCACGCCTGAGCAGTCGCGGCCGCGTGCTGTGGCGTGA CCTGCATGCCGTTACCGGATTCTGGGGCGCCGCGTTGCTGCTGGTGATGCTGCTCAGCGGCATGACCTGGACCGGTTTCT GGGGCAAGCAGTACGCGCAGGTGTGGAACGTGTTCCCGGCGGCGATGTGGGACAACGTGCCGACTTCCGATGTCGAGGCC GGCAGCCTCAATAACGCCGCGCGCCAGACCGTGCCGTGGGCGATGGAAAACACCCCGATGCCGATGTCCGGCGACCACGC CGAACACATGGCCCACGGCGGTATGCAACACGGCCCCGCTGCACCGACCATCCGCCTGCAGGACGTGCAAAACATCGCCG TTGAGCGCAAGGTCGAGCCGGGCTACAGCATCACAATGCCGACCACCGCCACCGGCGTGTTCACCATCGCCGTGTTCGCC GACGACCCACGCAACGACGCCACCCTGCACGTCGATCAGTACACCGGCAAGGTGCTGGCCGATGTGCGCTTCGAGCAGTA CGGCGCGGTTGCCCGGGCTACCGAGATCGGCGTGATGCTCCACGAAGGCAAGATGTTCGGCACTTTCAACCAGATCATCG TGCTGCTGATCTGCCTGATGATTTTGCTCAGCGCCGTCAGCGGCGTGGTGATCTGGTGGAAGCGTCGACCACAGGGCAAG TTCGGCGTGCCGCCGCTGCGCCACGATCTGCCGAAGTGGAAAACCGGGGTGGCGATCATGCTGGTTCTGGCGGTGGTGTT TCCGCTGGTGGGGGCTTCGCTGGTGGTGGTGTGGTTGCTGGATCGGCTGCTGTTGTCGCGTCTGGCCCGGCAAACTGAAT CTGCCTCAACTTCATCGTGA
Upstream 100 bases:
>100_bases AAGGTGGACATGAGTTTCTAACCCTGAAGGGCGCTCGCTCCCTTCAGGGAGCGGGCGGCAACAGAAAACGAGAAGATCCA AGCCAAGCGGAGCACACGTG
Downstream 100 bases:
>100_bases ATCTCGCGAGATGCGCGATCCAGACAGATCTTTAAACTGCCGGGGCTTAATCTCCGGCAATTTTTAGTGTTACTGTATAA CGCAAATTTGCTGCTCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: PepSY-Associated TM Helix Domain Protein; Iron-Regulated Membrane Protein; PepSY-Associated TM Helix Domain-Containing Protein; PepSY-Associated TM Helix Family; Sulfite Reductase; Peptidase; PepSY-Associated TM Helix Family Protein; PepSY-Associated TM Helix; PepSY-Associated Membrane Protein; PepSY-Associated TM Helix Containing Protein; Transmembrane Protein; Flavodoxin/Nitric Oxide Synthase; Pepsy-Associated Tm Helix Domain Protein; Outer Membrane Protein; Sulfite Reductase Flavoprotein Subunit Alpha; Protein Containing PepSY-Associated TM Helix; Transmembrane Transporter; PepSY Amd Peptidase M4 Protein; Conserved Iron-Regulated Membrane Protein; M4 Family Peptidase; Sulfite Reductase Alpha Subunit; Iron-Regulated Transmembrane Protein; Sulfite Reductase Flavoprotein Component
Number of amino acids: Translated: 459; Mature: 459
Protein sequence:
>459_residues MKQPKPNFYNLAWRWHFYAGLFVAPFMVMLALTGIIYLFKPQLDSLMYSSLLNVPAGHHTVPADDLLQKVKSAYPQGQVT QYLPPVNAERSAQFVVANAGHELNVFVDPYHGDILGEQDAKQNLQAIARAIHGELMIGTVGDRLIEMAAGWGVVLVVSGV FLWWPRGQAAGILWPRLSSRGRVLWRDLHAVTGFWGAALLLVMLLSGMTWTGFWGKQYAQVWNVFPAAMWDNVPTSDVEA GSLNNAARQTVPWAMENTPMPMSGDHAEHMAHGGMQHGPAAPTIRLQDVQNIAVERKVEPGYSITMPTTATGVFTIAVFA DDPRNDATLHVDQYTGKVLADVRFEQYGAVARATEIGVMLHEGKMFGTFNQIIVLLICLMILLSAVSGVVIWWKRRPQGK FGVPPLRHDLPKWKTGVAIMLVLAVVFPLVGASLVVVWLLDRLLLSRLARQTESASTSS
Sequences:
>Translated_459_residues MKQPKPNFYNLAWRWHFYAGLFVAPFMVMLALTGIIYLFKPQLDSLMYSSLLNVPAGHHTVPADDLLQKVKSAYPQGQVT QYLPPVNAERSAQFVVANAGHELNVFVDPYHGDILGEQDAKQNLQAIARAIHGELMIGTVGDRLIEMAAGWGVVLVVSGV FLWWPRGQAAGILWPRLSSRGRVLWRDLHAVTGFWGAALLLVMLLSGMTWTGFWGKQYAQVWNVFPAAMWDNVPTSDVEA GSLNNAARQTVPWAMENTPMPMSGDHAEHMAHGGMQHGPAAPTIRLQDVQNIAVERKVEPGYSITMPTTATGVFTIAVFA DDPRNDATLHVDQYTGKVLADVRFEQYGAVARATEIGVMLHEGKMFGTFNQIIVLLICLMILLSAVSGVVIWWKRRPQGK FGVPPLRHDLPKWKTGVAIMLVLAVVFPLVGASLVVVWLLDRLLLSRLARQTESASTSS >Mature_459_residues MKQPKPNFYNLAWRWHFYAGLFVAPFMVMLALTGIIYLFKPQLDSLMYSSLLNVPAGHHTVPADDLLQKVKSAYPQGQVT QYLPPVNAERSAQFVVANAGHELNVFVDPYHGDILGEQDAKQNLQAIARAIHGELMIGTVGDRLIEMAAGWGVVLVVSGV FLWWPRGQAAGILWPRLSSRGRVLWRDLHAVTGFWGAALLLVMLLSGMTWTGFWGKQYAQVWNVFPAAMWDNVPTSDVEA GSLNNAARQTVPWAMENTPMPMSGDHAEHMAHGGMQHGPAAPTIRLQDVQNIAVERKVEPGYSITMPTTATGVFTIAVFA DDPRNDATLHVDQYTGKVLADVRFEQYGAVARATEIGVMLHEGKMFGTFNQIIVLLICLMILLSAVSGVVIWWKRRPQGK FGVPPLRHDLPKWKTGVAIMLVLAVVFPLVGASLVVVWLLDRLLLSRLARQTESASTSS
Specific function: Unknown
COG id: COG3182
COG function: function code S; Uncharacterized iron-regulated membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50666; Mature: 50666
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQPKPNFYNLAWRWHFYAGLFVAPFMVMLALTGIIYLFKPQLDSLMYSSLLNVPAGHHT CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VPADDLLQKVKSAYPQGQVTQYLPPVNAERSAQFVVANAGHELNVFVDPYHGDILGEQDA CCHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCHHH KQNLQAIARAIHGELMIGTVGDRLIEMAAGWGVVLVVSGVFLWWPRGQAAGILWPRLSSR HHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHEECCCCCCCCEECCCCCCC GRVLWRDLHAVTGFWGAALLLVMLLSGMTWTGFWGKQYAQVWNVFPAAMWDNVPTSDVEA CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCCC GSLNNAARQTVPWAMENTPMPMSGDHAEHMAHGGMQHGPAAPTIRLQDVQNIAVERKVEP CCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHCCCC GYSITMPTTATGVFTIAVFADDPRNDATLHVDQYTGKVLADVRFEQYGAVARATEIGVML CCEEECCCCCCCEEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHEEEE HEGKMFGTFNQIIVLLICLMILLSAVSGVVIWWKRRPQGKFGVPPLRHDLPKWKTGVAIM ECCCHHCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHCCCCHHHHHHHH LVLAVVFPLVGASLVVVWLLDRLLLSRLARQTESASTSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKQPKPNFYNLAWRWHFYAGLFVAPFMVMLALTGIIYLFKPQLDSLMYSSLLNVPAGHHT CCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VPADDLLQKVKSAYPQGQVTQYLPPVNAERSAQFVVANAGHELNVFVDPYHGDILGEQDA CCHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCHHH KQNLQAIARAIHGELMIGTVGDRLIEMAAGWGVVLVVSGVFLWWPRGQAAGILWPRLSSR HHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHEECCCCCCCCEECCCCCCC GRVLWRDLHAVTGFWGAALLLVMLLSGMTWTGFWGKQYAQVWNVFPAAMWDNVPTSDVEA CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCCC GSLNNAARQTVPWAMENTPMPMSGDHAEHMAHGGMQHGPAAPTIRLQDVQNIAVERKVEP CCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHCCCC GYSITMPTTATGVFTIAVFADDPRNDATLHVDQYTGKVLADVRFEQYGAVARATEIGVML CCEEECCCCCCCEEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHEEEE HEGKMFGTFNQIIVLLICLMILLSAVSGVVIWWKRRPQGKFGVPPLRHDLPKWKTGVAIM ECCCHHCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHCCCCHHHHHHHH LVLAVVFPLVGASLVVVWLLDRLLLSRLARQTESASTSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA