| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is fhuA [H]
Identifier: 77456822
GI number: 77456822
Start: 685671
End: 687797
Strand: Reverse
Name: fhuA [H]
Synonym: Pfl01_0594
Alternate gene names: 77456822
Gene position: 687797-685671 (Counterclockwise)
Preceding gene: 77456823
Following gene: 77456821
Centisome position: 10.68
GC content: 62.58
Gene sequence:
>2127_bases ATGAACAAGTACCTCTTGTCCAGCCTCTGTCTGTTCGCCCTGAACCACAGCGCCCACGCCGACAACGCCCCGCTGACGCT GCCCACCGGCACCATCACCGCCCTGGCCAATGACGACCAGACCGTCAGCCTGAGCACGCCAACCAGCGCCGGCTCGCGTC TGAACCTCAGCGCCATGGAAACCCCGGCCAGTGTCGAAAGCCTGAGCGGCGAACAAGTCCGCGCCCGTGGCGATCGCAGC GTGCAGGACGCGGTGTCGCGCAGCACCGGCATCAGCCGCACCGGCACGCCGGGCGATGGCGGCACCTCGTTGCAGGCCCG GGGTTTTACCGGGCAGAGCTCGGTGATGCAGTTGTATGACGGCAACCGCCTGTACACCGGCATGGGCACCGTGACGTTCC CGGTCGACACCTGGTCGGTAGAACGCGTCGATGTCCTGCGCGGCCCGGCCTCGGTGCTGTACGGCGAAGGCGCGACCGGC GCGGTGGTCAACGTGATCCCGAAAAAGCCGTTCGAAGGCGAAATCGAAAACCACGTGCGCGTCGGTTACGGCTCGTTCGA CCGCCAGCAGCAGGCGTTCGACAGCGGCGGCTCGCTGACCGACACCCTGAGCTATCGCCTCAACCTCAATCGCCTGCGCA GCAACGGCTGGGTCGATCGCGGTGATTCGTCCAGCGACTTCATCAGCGCCGCCCTGCGCTGGCAGGCCACCGACGATCTG AGTTTCACCCTCGCTCACGATTACGGCGATCAGCGCCCGCAGAACTACTTCGGTACGCCACTGATCAACGGCCAGTTGAA GGACAGCCTGCGCAACAAGAACTACAACGTGCGCGACGACAAACAGCACTACAACGATCAATGGACGCGCCTGACCAGCG ACTGGCAGATCAACGATGCAGTCAGCGCCAACAACGAGCTGTACTACCTCAAGGCCCAGCGCCGCTGGCAGAACGCCGAG AACTACAACTTCGACGTTGACAGTCAGCAGCTCAGCCGCAGCGGCTACTTCGGTATCGGCCACCAACAGGAACAGGTCGG CGACCGCCAGACCTTCACCTTCAAGCACTCGCTGTTCGGCCTCGACAGCCAGACCGTGACCGGCGTTGATTACAACCGCA TTCGCTTCCAGCTCGACAGCAACTCGCCGTTCAACGACGTATTGCCGAACGGCCAGCCGCTGGATCGCTATCACCCGCAG ACCGGCTATTTCGAGAGCGCCGATCCGTATCGCGATCAGTTCGACAGCACCACCAAACAGATGTCGGTGTTCGCCGAAAA CCGCACGCAACTGAGCGAACGCTGGTCGCTGGTGACCGGTGTGCGCCGCGACTACGTACACGTGGATCGCAACAACCTGG TCGACGGCAGCCAGAGCGACAAGACCCTGACCGGCAACAACTGGAAGGCCGGTCTGGTGTTCGCGCTGACCCAGGACACC TCGTTCTACGGCCAGGTCGCCACCAGCACCGATGGCATCGGCGGTTTGATTTCCCTGAGCCCGAGCCAGCAGCAATATGA CCTGTCGACCGCGCGGCAAACCGAGATCGGCCTGAAGCAGTTGTTCTGGGATCAGCGTGGTGAGTTCACCCTGGCGGCGT ATCGCATCGTGAAGAAGAAGCTGCTGACTGACGACCCGGGCAACCCGACGCTCAAGCAGCAGGTCGGCCAGCAATCGTCG AACGGTGTGGAGGCCAGCCTCGACCTGCAACTGCAGAACGCCTGGCAACTGCAAGCCAACGCTGCAATCGTGAAGGCCAA GTACGACGATTTCGAAGAAGTGGTCGGTGGCGTGCCCGTGTCGCGCAACGGCAATCGCCCGGTGGACGTGCCACGCCGCA CTGCCAATCTGTGGCTGAGCAAGGCGCTGACCGATGACCTGAAAGCCGGTGCCGGCGTGCGTTATGTCGATGCGCGCTAC GCCGACATGGCCAACTGCAACGAGCTGCCGAGCTACACCGTGGTCGATGCAACGCTGTCGTGGAAAGCCCTGCGCAACAC CACGCTGGGCTTGCAGGTGAACAATCTGTTTGACCGGACGTACGCGCAAAGCCAATACAATGAGGGCCAGCAGTGGATTC TGGGTGAGCCTCGTTCGTTCTTTGTCACCGCTGACTACACCTTCTAG
Upstream 100 bases:
>100_bases TTTAGTGTTACTGTATAACGCAAATTTGCTGCTCTGCCCGCAGCCATGCACTGTCATGAGGCTGCGGGCTTTTCTTTTGA AGAAGTGATTCACCGTCCCG
Downstream 100 bases:
>100_bases AACAGGAACGAAATGAGCTCACTGTCCCTCACCGATCTCGCCTGGACACCTCTGGGCCACGGCCATTGCCATCACCAGTT CCAGCTGCGTGACGCCTCGT
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: Ferric hydroxamate receptor; Ferric hydroxamate uptake [H]
Number of amino acids: Translated: 708; Mature: 708
Protein sequence:
>708_residues MNKYLLSSLCLFALNHSAHADNAPLTLPTGTITALANDDQTVSLSTPTSAGSRLNLSAMETPASVESLSGEQVRARGDRS VQDAVSRSTGISRTGTPGDGGTSLQARGFTGQSSVMQLYDGNRLYTGMGTVTFPVDTWSVERVDVLRGPASVLYGEGATG AVVNVIPKKPFEGEIENHVRVGYGSFDRQQQAFDSGGSLTDTLSYRLNLNRLRSNGWVDRGDSSSDFISAALRWQATDDL SFTLAHDYGDQRPQNYFGTPLINGQLKDSLRNKNYNVRDDKQHYNDQWTRLTSDWQINDAVSANNELYYLKAQRRWQNAE NYNFDVDSQQLSRSGYFGIGHQQEQVGDRQTFTFKHSLFGLDSQTVTGVDYNRIRFQLDSNSPFNDVLPNGQPLDRYHPQ TGYFESADPYRDQFDSTTKQMSVFAENRTQLSERWSLVTGVRRDYVHVDRNNLVDGSQSDKTLTGNNWKAGLVFALTQDT SFYGQVATSTDGIGGLISLSPSQQQYDLSTARQTEIGLKQLFWDQRGEFTLAAYRIVKKKLLTDDPGNPTLKQQVGQQSS NGVEASLDLQLQNAWQLQANAAIVKAKYDDFEEVVGGVPVSRNGNRPVDVPRRTANLWLSKALTDDLKAGAGVRYVDARY ADMANCNELPSYTVVDATLSWKALRNTTLGLQVNNLFDRTYAQSQYNEGQQWILGEPRSFFVTADYTF
Sequences:
>Translated_708_residues MNKYLLSSLCLFALNHSAHADNAPLTLPTGTITALANDDQTVSLSTPTSAGSRLNLSAMETPASVESLSGEQVRARGDRS VQDAVSRSTGISRTGTPGDGGTSLQARGFTGQSSVMQLYDGNRLYTGMGTVTFPVDTWSVERVDVLRGPASVLYGEGATG AVVNVIPKKPFEGEIENHVRVGYGSFDRQQQAFDSGGSLTDTLSYRLNLNRLRSNGWVDRGDSSSDFISAALRWQATDDL SFTLAHDYGDQRPQNYFGTPLINGQLKDSLRNKNYNVRDDKQHYNDQWTRLTSDWQINDAVSANNELYYLKAQRRWQNAE NYNFDVDSQQLSRSGYFGIGHQQEQVGDRQTFTFKHSLFGLDSQTVTGVDYNRIRFQLDSNSPFNDVLPNGQPLDRYHPQ TGYFESADPYRDQFDSTTKQMSVFAENRTQLSERWSLVTGVRRDYVHVDRNNLVDGSQSDKTLTGNNWKAGLVFALTQDT SFYGQVATSTDGIGGLISLSPSQQQYDLSTARQTEIGLKQLFWDQRGEFTLAAYRIVKKKLLTDDPGNPTLKQQVGQQSS NGVEASLDLQLQNAWQLQANAAIVKAKYDDFEEVVGGVPVSRNGNRPVDVPRRTANLWLSKALTDDLKAGAGVRYVDARY ADMANCNELPSYTVVDATLSWKALRNTTLGLQVNNLFDRTYAQSQYNEGQQWILGEPRSFFVTADYTF >Mature_708_residues MNKYLLSSLCLFALNHSAHADNAPLTLPTGTITALANDDQTVSLSTPTSAGSRLNLSAMETPASVESLSGEQVRARGDRS VQDAVSRSTGISRTGTPGDGGTSLQARGFTGQSSVMQLYDGNRLYTGMGTVTFPVDTWSVERVDVLRGPASVLYGEGATG AVVNVIPKKPFEGEIENHVRVGYGSFDRQQQAFDSGGSLTDTLSYRLNLNRLRSNGWVDRGDSSSDFISAALRWQATDDL SFTLAHDYGDQRPQNYFGTPLINGQLKDSLRNKNYNVRDDKQHYNDQWTRLTSDWQINDAVSANNELYYLKAQRRWQNAE NYNFDVDSQQLSRSGYFGIGHQQEQVGDRQTFTFKHSLFGLDSQTVTGVDYNRIRFQLDSNSPFNDVLPNGQPLDRYHPQ TGYFESADPYRDQFDSTTKQMSVFAENRTQLSERWSLVTGVRRDYVHVDRNNLVDGSQSDKTLTGNNWKAGLVFALTQDT SFYGQVATSTDGIGGLISLSPSQQQYDLSTARQTEIGLKQLFWDQRGEFTLAAYRIVKKKLLTDDPGNPTLKQQVGQQSS NGVEASLDLQLQNAWQLQANAAIVKAKYDDFEEVVGGVPVSRNGNRPVDVPRRTANLWLSKALTDDLKAGAGVRYVDARY ADMANCNELPSYTVVDATLSWKALRNTTLGLQVNNLFDRTYAQSQYNEGQQWILGEPRSFFVTADYTF
Specific function: This receptor binds the ferrichrome-iron ligand. It interacts with the tonB protein, which is responsible for energy coupling of the ferrichrome-promoted iron transport system. Acts as a receptor for bacteriophage T5 as well as T1, phi80 and colicin M. Bi
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=712, Percent_Identity=24.7191011235955, Blast_Score=152, Evalue=8e-38, Organism=Escherichia coli, GI1787344, Length=773, Percent_Identity=24.1914618369987, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI1787024, Length=397, Percent_Identity=26.448362720403, Blast_Score=95, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 78783; Mature: 78783
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKYLLSSLCLFALNHSAHADNAPLTLPTGTITALANDDQTVSLSTPTSAGSRLNLSAME CCHHHHHHHHHHHHCCCCCCCCCCEEECCCEEEEEECCCCEEEEECCCCCCCEEEEHHCC TPASVESLSGEQVRARGDRSVQDAVSRSTGISRTGTPGDGGTSLQARGFTGQSSVMQLYD CCCHHHHCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHEEEC GNRLYTGMGTVTFPVDTWSVERVDVLRGPASVLYGEGATGAVVNVIPKKPFEGEIENHVR CCEEEECCCEEEEEECCCCCCHHHHHCCCCCEEECCCCCCCEEEECCCCCCCCCCCCCEE VGYGSFDRQQQAFDSGGSLTDTLSYRLNLNRLRSNGWVDRGDSSSDFISAALRWQATDDL ECCCCCHHHHHHHHCCCCEEEEEEEEEEHHHHHCCCCCCCCCCCHHHHHHHEEEECCCCC SFTLAHDYGDQRPQNYFGTPLINGQLKDSLRNKNYNVRDDKQHYNDQWTRLTSDWQINDA EEEEEECCCCCCCCCCCCCCEECCHHHHHHHCCCCCCCCCHHHHCCHHHEECCCCEECCC VSANNELYYLKAQRRWQNAENYNFDVDSQQLSRSGYFGIGHQQEQVGDRQTFTFKHSLFG CCCCCEEEEEEEHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHCCCCEEEEEEHHHCC LDSQTVTGVDYNRIRFQLDSNSPFNDVLPNGQPLDRYHPQTGYFESADPYRDQFDSTTKQ CCCCEEECCCEEEEEEEECCCCCHHHCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHH MSVFAENRTQLSERWSLVTGVRRDYVHVDRNNLVDGSQSDKTLTGNNWKAGLVFALTQDT HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEECCCCCCEEEEEEECCC SFYGQVATSTDGIGGLISLSPSQQQYDLSTARQTEIGLKQLFWDQRGEFTLAAYRIVKKK CEEEEEECCCCCCCEEEEECCCCCHHCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHH LLTDDPGNPTLKQQVGQQSSNGVEASLDLQLQNAWQLQANAAIVKAKYDDFEEVVGGVPV HHCCCCCCCHHHHHHCCCCCCCCEEEEEEEECCCEEEECCEEEEEECCCCHHHHHCCCCC SRNGNRPVDVPRRTANLWLSKALTDDLKAGAGVRYVDARYADMANCNELPSYTVVDATLS CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHCCCCCCCCCCEEEEEEEEE WKALRNTTLGLQVNNLFDRTYAQSQYNEGQQWILGEPRSFFVTADYTF HHHHHCCEEEEEEHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEECCC >Mature Secondary Structure MNKYLLSSLCLFALNHSAHADNAPLTLPTGTITALANDDQTVSLSTPTSAGSRLNLSAME CCHHHHHHHHHHHHCCCCCCCCCCEEECCCEEEEEECCCCEEEEECCCCCCCEEEEHHCC TPASVESLSGEQVRARGDRSVQDAVSRSTGISRTGTPGDGGTSLQARGFTGQSSVMQLYD CCCHHHHCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHEEEC GNRLYTGMGTVTFPVDTWSVERVDVLRGPASVLYGEGATGAVVNVIPKKPFEGEIENHVR CCEEEECCCEEEEEECCCCCCHHHHHCCCCCEEECCCCCCCEEEECCCCCCCCCCCCCEE VGYGSFDRQQQAFDSGGSLTDTLSYRLNLNRLRSNGWVDRGDSSSDFISAALRWQATDDL ECCCCCHHHHHHHHCCCCEEEEEEEEEEHHHHHCCCCCCCCCCCHHHHHHHEEEECCCCC SFTLAHDYGDQRPQNYFGTPLINGQLKDSLRNKNYNVRDDKQHYNDQWTRLTSDWQINDA EEEEEECCCCCCCCCCCCCCEECCHHHHHHHCCCCCCCCCHHHHCCHHHEECCCCEECCC VSANNELYYLKAQRRWQNAENYNFDVDSQQLSRSGYFGIGHQQEQVGDRQTFTFKHSLFG CCCCCEEEEEEEHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHCCCCEEEEEEHHHCC LDSQTVTGVDYNRIRFQLDSNSPFNDVLPNGQPLDRYHPQTGYFESADPYRDQFDSTTKQ CCCCEEECCCEEEEEEEECCCCCHHHCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHH MSVFAENRTQLSERWSLVTGVRRDYVHVDRNNLVDGSQSDKTLTGNNWKAGLVFALTQDT HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEECCCCCCEEEEEEECCC SFYGQVATSTDGIGGLISLSPSQQQYDLSTARQTEIGLKQLFWDQRGEFTLAAYRIVKKK CEEEEEECCCCCCCEEEEECCCCCHHCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHH LLTDDPGNPTLKQQVGQQSSNGVEASLDLQLQNAWQLQANAAIVKAKYDDFEEVVGGVPV HHCCCCCCCHHHHHHCCCCCCCCEEEEEEEECCCEEEECCEEEEEECCCCHHHHHCCCCC SRNGNRPVDVPRRTANLWLSKALTDDLKAGAGVRYVDARYADMANCNELPSYTVVDATLS CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHCCCCCCCCCCEEEEEEEEE WKALRNTTLGLQVNNLFDRTYAQSQYNEGQQWILGEPRSFFVTADYTF HHHHHCCEEEEEEHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3079747; 8202364; 9278503; 2823072; 7515827; 8617231; 9856937; 9865695; 10850805 [H]