| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is livJ [C]
Identifier: 77456780
GI number: 77456780
Start: 645744
End: 646877
Strand: Direct
Name: livJ [C]
Synonym: Pfl01_0552
Alternate gene names: 77456780
Gene position: 645744-646877 (Clockwise)
Preceding gene: 77456779
Following gene: 77456781
Centisome position: 10.03
GC content: 60.85
Gene sequence:
>1134_bases ATGTCCCAGACGTTTTACAAGAAAGGCTTTCTGGCCCTCGCAGTGGCTACTGCGCTGGGTGTTTCTGCGTTTGCACAAGC TGATGTGAAAATCGGTGTGGCGGGTCCGATGACGGGCGCCAACGCGGCATTTGGCGAGCAATACATGAAAGGGGCACAAG CGGCGGCCGACGCGGTCAACGCGGCGGGCGGCGTCAACGGGGAGAAGATCGTCCTGGTCAAGGGCGATGACGCTTGCGAG CCGAAACAGGCGGTGACGGTCGCCAAGGACCTCACCAACCAGAAAGTCGCCGGTGTGGTCGGTCACTTCTGCTCGTCCTC CACCATTCCTGCGTCCGAAATCTACGACGAAGCCGGGATCATTGCCATCACCCCGGGTTCCACCAACCCGCAAGTGACCG AGCGCGGTCTGAGCGCCATGTTCCGTATGTGCGGCCGTGACGACCAGCAAGGCATCGTCGCCGGCGATTACATCGTCGAC GTGCTCAAGGGCAAGAAAGTCGTCGTGCTGCACGACAAGGACACCTATGGTCAGGGCCTGGCCGATGCGACCAAGGCACA ACTGGAAAAACGCGGCGTGAAGCCGGTGCTGTACGAAGGCCTGACCCGTGGCGAGAAAGACTTCAGCACAATCGTCACCA AGATCCGTGGCGCCGGCGCCGATGTCGTCTACTTCGGTGGCCTGCACCCGGAAGCCGGCCCGCTGGTTCGCCAACTGCGT GAACAAGGCCTGAAAGACGTCAAGTTCATGTCCGATGACGGCATCGTGACCGATGAACTGGTGACCACCGCCGGTGGCCC GCAATTCGTCGACGGCGTGCTGATGACGTTTGGTGCCGACCCGCGCCTGCTGCCAGACAGCAAGACCGTGGTAGATGCAT TCCGCAAGGCTGGCACCGAGCCTGAAGGCTACACCCTGTACGCCTATGCATCGGTTCAGGCCCTGGCCGCCGCCTTCAAC GGCGCCAAGTCGAACAAGGGCGAGGAGGCCGCTGCCTGGCTGAAGAAGAACCCGGTCAAGACCGTCATGGGCGAGAAGAC CTGGGATTCCAAAGGCGACCTGAAGGTCTCCGACTACGTGGTCTACCAATGGGACAAGGACGGCAAATATCACCAGCTGG AAAAACAGAAATAA
Upstream 100 bases:
>100_bases GCGACTTTTTGAAGAATAAAAAACCGATGGCACGGCCCTTGCTCTGAGCATTCAAGTGAAGTCGCAGTGCCAACTAAAAA AAACCTTGGAGCACCACCTC
Downstream 100 bases:
>100_bases CGGCACCTGATCAACCGGACGCCACATTCCCTGTGGGAGCGGGCTTGCCCGCGATGACGGCCTGACAGTCGACAACTTTG TTGAATGTTCTACCGCTATC
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm]; ADP; L-valine [Cytoplasm]; L-iso-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MSQTFYKKGFLALAVATALGVSAFAQADVKIGVAGPMTGANAAFGEQYMKGAQAAADAVNAAGGVNGEKIVLVKGDDACE PKQAVTVAKDLTNQKVAGVVGHFCSSSTIPASEIYDEAGIIAITPGSTNPQVTERGLSAMFRMCGRDDQQGIVAGDYIVD VLKGKKVVVLHDKDTYGQGLADATKAQLEKRGVKPVLYEGLTRGEKDFSTIVTKIRGAGADVVYFGGLHPEAGPLVRQLR EQGLKDVKFMSDDGIVTDELVTTAGGPQFVDGVLMTFGADPRLLPDSKTVVDAFRKAGTEPEGYTLYAYASVQALAAAFN GAKSNKGEEAAAWLKKNPVKTVMGEKTWDSKGDLKVSDYVVYQWDKDGKYHQLEKQK
Sequences:
>Translated_377_residues MSQTFYKKGFLALAVATALGVSAFAQADVKIGVAGPMTGANAAFGEQYMKGAQAAADAVNAAGGVNGEKIVLVKGDDACE PKQAVTVAKDLTNQKVAGVVGHFCSSSTIPASEIYDEAGIIAITPGSTNPQVTERGLSAMFRMCGRDDQQGIVAGDYIVD VLKGKKVVVLHDKDTYGQGLADATKAQLEKRGVKPVLYEGLTRGEKDFSTIVTKIRGAGADVVYFGGLHPEAGPLVRQLR EQGLKDVKFMSDDGIVTDELVTTAGGPQFVDGVLMTFGADPRLLPDSKTVVDAFRKAGTEPEGYTLYAYASVQALAAAFN GAKSNKGEEAAAWLKKNPVKTVMGEKTWDSKGDLKVSDYVVYQWDKDGKYHQLEKQK >Mature_376_residues SQTFYKKGFLALAVATALGVSAFAQADVKIGVAGPMTGANAAFGEQYMKGAQAAADAVNAAGGVNGEKIVLVKGDDACEP KQAVTVAKDLTNQKVAGVVGHFCSSSTIPASEIYDEAGIIAITPGSTNPQVTERGLSAMFRMCGRDDQQGIVAGDYIVDV LKGKKVVVLHDKDTYGQGLADATKAQLEKRGVKPVLYEGLTRGEKDFSTIVTKIRGAGADVVYFGGLHPEAGPLVRQLRE QGLKDVKFMSDDGIVTDELVTTAGGPQFVDGVLMTFGADPRLLPDSKTVVDAFRKAGTEPEGYTLYAYASVQALAAAFNG AKSNKGEEAAAWLKKNPVKTVMGEKTWDSKGDLKVSDYVVYQWDKDGKYHQLEKQK
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI48994941, Length=362, Percent_Identity=41.9889502762431, Blast_Score=284, Evalue=8e-78, Organism=Escherichia coli, GI1789867, Length=362, Percent_Identity=40.0552486187845, Blast_Score=270, Evalue=1e-73,
Paralogues:
None
Copy number: 10140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 8822 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal med
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 39946; Mature: 39815
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQTFYKKGFLALAVATALGVSAFAQADVKIGVAGPMTGANAAFGEQYMKGAQAAADAVN CCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH AAGGVNGEKIVLVKGDDACEPKQAVTVAKDLTNQKVAGVVGHFCSSSTIPASEIYDEAGI HCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHCCCCE IAITPGSTNPQVTERGLSAMFRMCGRDDQQGIVAGDYIVDVLKGKKVVVLHDKDTYGQGL EEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHCCCEEEEEECCCCCCCCH ADATKAQLEKRGVKPVLYEGLTRGEKDFSTIVTKIRGAGADVVYFGGLHPEAGPLVRQLR HHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHH EQGLKDVKFMSDDGIVTDELVTTAGGPQFVDGVLMTFGADPRLLPDSKTVVDAFRKAGTE HCCCHHEEEECCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCC PEGYTLYAYASVQALAAAFNGAKSNKGEEAAAWLKKNPVKTVMGEKTWDSKGDLKVSDYV CCCEEEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHCCCCCCCCCCEEEEEEE VYQWDKDGKYHQLEKQK EEEECCCCCCCCCCCCC >Mature Secondary Structure SQTFYKKGFLALAVATALGVSAFAQADVKIGVAGPMTGANAAFGEQYMKGAQAAADAVN CCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH AAGGVNGEKIVLVKGDDACEPKQAVTVAKDLTNQKVAGVVGHFCSSSTIPASEIYDEAGI HCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHCCCCE IAITPGSTNPQVTERGLSAMFRMCGRDDQQGIVAGDYIVDVLKGKKVVVLHDKDTYGQGL EEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHCCCEEEEEECCCCCCCCH ADATKAQLEKRGVKPVLYEGLTRGEKDFSTIVTKIRGAGADVVYFGGLHPEAGPLVRQLR HHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHH EQGLKDVKFMSDDGIVTDELVTTAGGPQFVDGVLMTFGADPRLLPDSKTVVDAFRKAGTE HCCCHHEEEECCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCC PEGYTLYAYASVQALAAAFNGAKSNKGEEAAAWLKKNPVKTVMGEKTWDSKGDLKVSDYV CCCEEEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHCCCCCCCCCCEEEEEEE VYQWDKDGKYHQLEKQK EEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O; ATP; L-valine [Periplasm]; L-iso-leucine [Periplasm] [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA