| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is hflK [H]
Identifier: 77456753
GI number: 77456753
Start: 607720
End: 608889
Strand: Direct
Name: hflK [H]
Synonym: Pfl01_0525
Alternate gene names: 77456753
Gene position: 607720-608889 (Clockwise)
Preceding gene: 77456752
Following gene: 77456754
Centisome position: 9.44
GC content: 61.54
Gene sequence:
>1170_bases ATGGCTTGGAATGAGCCGGGTGGCAACTCGAACAATCAGGATCCTTGGGGTGGCAAGCGTCGCAACAACGGCGACCGCAA GGGACCGCCGGATCTCGACGAGGCCTTCCGAAAGCTGCAGGAAAGCCTGAACGGGTTGTTCGGTGGTGGAAAAAAACGCG GTGATGACGGTGGTGGCTCGGGCAAGAGCGGCGGCTTCGGCGGCCTGCTCGGCATCGGCCTTGTCGTGCTGGCGGCCGTC TGGCTGTACAGCGCGGTGTATGTCGTGGACGAGCAGGAGCAAGCCGTGGTGCTGCGCTTCGGCAAGTACTACGAGACTGT CGGTCCCGGCCTGAACATCTACTTCCCGCCGATCGACAAGAAGTACATGGAGAACGTCACGCGTGAGCGTGCCTACACCA AGCAGGGCCAGATGCTGACCGAAGACGAGAACATCGTCGAAGTGCCGCTGACCGTGCAGTACAAGATCAGCAACCTGCAG GACTTCGTGCTGAACGTCGACCAGCCGGAAATCAGCCTGCAACATGCGACCGACAGTGCGCTGCGCCATGTGGTGGGCTC CACCGCGATGGACCAGGTGCTGACCGAAGGTCGTGAGCTGATGGCCAGCGAGATCAAGGAGCGCCTGCAGCGCTTCCTCG ATACCTATCGCACCGGTATCACGGTCACCCAGGTCAACGTACAGAGCGCAGCGGCACCGCGTGAAGTGCAGGAAGCCTTC GATGACGTGATCCGCGCCCGTGAAGACGAGCAGCGTTCGCGCAACCAGGCTGAAACCTACGCCAACGGCGTGGTGCCGGA AGCCCGTGGTCAGGCCCAGCGTATCCTCGAAGATGCCAACGGTTACCGTGACGAAACGGTCTCGCGCGCCAAGGGTGAGG CGGATCGCTTCACCAAACTGGTTGCCGAGTATCGCAAGGCGCCCGAGGTCACTCGTCAGCGTCTGTACCTGGACACCATG CAGGAAGTCTTCAGCAGCACCAGCAAGGTACTCGTGACCGGCAACAAGAACGGCCAGAGCAACCTGCTTTACCTGCCGCT GGACAAGATGATTCAGAACAGTTCGGGCAGCAATGCACCGGTCACCGGTTCGGCTGCCGCCAGCAACAACACGGACGCTA CGCCGCATGTCACTGACCTGCCACAGTCGCGTACAAGGGAGACCCGCTGA
Upstream 100 bases:
>100_bases ATAAAAGCCTGACAAAGCGGTTGTGCCGCAACGGCAGGCATTCTGTAGCATTGGTCGGCGCGCCGTGGGTGCGTCTTTGC TTTATCAGATGGAGAGCGCT
Downstream 100 bases:
>100_bases TGAGCAATAAATCGCTGATCGCCCTGATCGTTGGCGTTGTTGTGGTACTGGTTGGCTGGAACTGCTTCTACATCGTCGCT CAGACCGAGCGCGCGGTGTT
Product: HflK
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MAWNEPGGNSNNQDPWGGKRRNNGDRKGPPDLDEAFRKLQESLNGLFGGGKKRGDDGGGSGKSGGFGGLLGIGLVVLAAV WLYSAVYVVDEQEQAVVLRFGKYYETVGPGLNIYFPPIDKKYMENVTRERAYTKQGQMLTEDENIVEVPLTVQYKISNLQ DFVLNVDQPEISLQHATDSALRHVVGSTAMDQVLTEGRELMASEIKERLQRFLDTYRTGITVTQVNVQSAAAPREVQEAF DDVIRAREDEQRSRNQAETYANGVVPEARGQAQRILEDANGYRDETVSRAKGEADRFTKLVAEYRKAPEVTRQRLYLDTM QEVFSSTSKVLVTGNKNGQSNLLYLPLDKMIQNSSGSNAPVTGSAAASNNTDATPHVTDLPQSRTRETR
Sequences:
>Translated_389_residues MAWNEPGGNSNNQDPWGGKRRNNGDRKGPPDLDEAFRKLQESLNGLFGGGKKRGDDGGGSGKSGGFGGLLGIGLVVLAAV WLYSAVYVVDEQEQAVVLRFGKYYETVGPGLNIYFPPIDKKYMENVTRERAYTKQGQMLTEDENIVEVPLTVQYKISNLQ DFVLNVDQPEISLQHATDSALRHVVGSTAMDQVLTEGRELMASEIKERLQRFLDTYRTGITVTQVNVQSAAAPREVQEAF DDVIRAREDEQRSRNQAETYANGVVPEARGQAQRILEDANGYRDETVSRAKGEADRFTKLVAEYRKAPEVTRQRLYLDTM QEVFSSTSKVLVTGNKNGQSNLLYLPLDKMIQNSSGSNAPVTGSAAASNNTDATPHVTDLPQSRTRETR >Mature_388_residues AWNEPGGNSNNQDPWGGKRRNNGDRKGPPDLDEAFRKLQESLNGLFGGGKKRGDDGGGSGKSGGFGGLLGIGLVVLAAVW LYSAVYVVDEQEQAVVLRFGKYYETVGPGLNIYFPPIDKKYMENVTRERAYTKQGQMLTEDENIVEVPLTVQYKISNLQD FVLNVDQPEISLQHATDSALRHVVGSTAMDQVLTEGRELMASEIKERLQRFLDTYRTGITVTQVNVQSAAAPREVQEAFD DVIRAREDEQRSRNQAETYANGVVPEARGQAQRILEDANGYRDETVSRAKGEADRFTKLVAEYRKAPEVTRQRLYLDTMQ EVFSSTSKVLVTGNKNGQSNLLYLPLDKMIQNSSGSNAPVTGSAAASNNTDATPHVTDLPQSRTRETR
Specific function: HflC and HflK could encode or regulate a protease [H]
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family. HflK subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790616, Length=381, Percent_Identity=44.6194225721785, Blast_Score=269, Evalue=2e-73, Organism=Escherichia coli, GI1786697, Length=286, Percent_Identity=25.5244755244755, Blast_Score=62, Evalue=6e-11, Organism=Caenorhabditis elegans, GI32564147, Length=243, Percent_Identity=26.7489711934156, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI281365664, Length=198, Percent_Identity=27.2727272727273, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI281361633, Length=174, Percent_Identity=24.1379310344828, Blast_Score=66, Evalue=5e-11, Organism=Drosophila melanogaster, GI62484448, Length=198, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI281361631, Length=174, Percent_Identity=24.1379310344828, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI24657857, Length=214, Percent_Identity=25.2336448598131, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 - InterPro: IPR010201 - InterPro: IPR020980 - InterPro: IPR001972 [H]
Pfam domain/function: PF01145 Band_7; PF12221 HflK_N [H]
EC number: NA
Molecular weight: Translated: 43000; Mature: 42869
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWNEPGGNSNNQDPWGGKRRNNGDRKGPPDLDEAFRKLQESLNGLFGGGKKRGDDGGGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GKSGGFGGLLGIGLVVLAAVWLYSAVYVVDEQEQAVVLRFGKYYETVGPGLNIYFPPIDK CCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCH KYMENVTRERAYTKQGQMLTEDENIVEVPLTVQYKISNLQDFVLNVDQPEISLQHATDSA HHHHHHHHHHHHHHCCCEEECCCCEEEECEEEEEECCCHHHHHHCCCCCCCHHHHHHHHH LRHVVGSTAMDQVLTEGRELMASEIKERLQRFLDTYRTGITVTQVNVQSAAAPREVQEAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHCCHHHHHHHH DDVIRAREDEQRSRNQAETYANGVVPEARGQAQRILEDANGYRDETVSRAKGEADRFTKL HHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHH VAEYRKAPEVTRQRLYLDTMQEVFSSTSKVLVTGNKNGQSNLLYLPLDKMIQNSSGSNAP HHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEHHHHHCCCCCCCCC VTGSAAASNNTDATPHVTDLPQSRTRETR CCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AWNEPGGNSNNQDPWGGKRRNNGDRKGPPDLDEAFRKLQESLNGLFGGGKKRGDDGGGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GKSGGFGGLLGIGLVVLAAVWLYSAVYVVDEQEQAVVLRFGKYYETVGPGLNIYFPPIDK CCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCH KYMENVTRERAYTKQGQMLTEDENIVEVPLTVQYKISNLQDFVLNVDQPEISLQHATDSA HHHHHHHHHHHHHHCCCEEECCCCEEEECEEEEEECCCHHHHHHCCCCCCCHHHHHHHHH LRHVVGSTAMDQVLTEGRELMASEIKERLQRFLDTYRTGITVTQVNVQSAAAPREVQEAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHCCHHHHHHHH DDVIRAREDEQRSRNQAETYANGVVPEARGQAQRILEDANGYRDETVSRAKGEADRFTKL HHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHH VAEYRKAPEVTRQRLYLDTMQEVFSSTSKVLVTGNKNGQSNLLYLPLDKMIQNSSGSNAP HHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEHHHHHCCCCCCCCC VTGSAAASNNTDATPHVTDLPQSRTRETR CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]