| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is hflX [H]
Identifier: 77456752
GI number: 77456752
Start: 606322
End: 607623
Strand: Direct
Name: hflX [H]
Synonym: Pfl01_0524
Alternate gene names: 77456752
Gene position: 606322-607623 (Clockwise)
Preceding gene: 77456751
Following gene: 77456753
Centisome position: 9.42
GC content: 60.06
Gene sequence:
>1302_bases TTGTTCTTTGAGCGCCACGGTGGTGGTGAACGAGTCATCCTCGTTCACTTGGATGGACAGGACCCTGAGGCGCGCGAAGA TCCGCAGGAGTTTCAGGAACTGGCAAATTCGGCTGGCGCCGAGACCGTTGCGTTTTTTAACGTGCCGCGTCATCGGCCAA CCGCCAAATACCTGATTGGCAGCGGCAAGGTCGAGGAACTGCGCGACCTGGTCCACGCCGAAGAAGCCGATCTGGTGATC TTCAATCACACCCTTACACCCAGTCAGGAACGTAACCTCGAACGTGTTTTCGAGTGTCGCGTGATCGACCGTACCGGTCT GATTCTCGATATTTTCGCCCAACGCGCCCGTACCCATGAGGGCAAGCTCCAGGTCGAACTGGCCCAGCTTGACCACATGA GCACCCGGCTGGTTCGCGGCTGGACTCACCTTGAGCGTCAGGGTGGCGGTATCGGCATGCGCGGCCCGGGTGAAACCCAG CTCGAAACCGACCGGCGACTGCTGCGGGTTCGCCTGCGCCAGATCAAGCGGCGGCTGGAAAAAGTGCGCAGCCAGCGCGA ACAGTCGCGTCGCGGCCGCTCGCGTGCGGATATCCCTACCGTTTCTCTGGTGGGATACACCAACGCCGGTAAATCCACGC TGTTCAATAATGTGACGAAGTCCGAGGTGTACGCGGCTGACCAGCTGTTCGCCACGCTCGACCCGACCCTGCGCCGTCTG GATCTGGACGACCTGGGGCCGATTGTCCTGGCCGACACCGTGGGCTTCATCCGCCACTTGCCGCACAAACTGGTCGAGGC ATTTCGGTCTACGCTCGAAGAGTCGAGCAACTCCGACCTGCTGTTGCACGTGATCGATGCGGCCGAACCGGATCGCATGT TGCAGATCGAGCAGGTGATGGTGGTGCTGGGCGAGATCGGTGCCCAGGACTTGCCGATCCTCGAGGTCTATAACAAACTC GATTTGCTTGAAGGCGTTGAGCCACAAATCCAGCGCGATGAAAACGGCAAGCCCCAGCGGGTCTGGCTGTCGGCGCGTGA TGGCACCGGTCTGGAATTGCTCGAGCAGGCGATTGCCGAGTTGTTGGGCAGCGACCTGTTCGTGGGGACCTTGCGCTTGC CTCAACGGTTCGCGCGTCTGCGTGCGCAGTTCTTCGAACTGGGCGCGGTACAGAAAGAAGAACACGATGAAGAAGGGGTC AGCTTGCTGGCCGTTCGATTGCCACGCTCGGAGCTCAATCGACTGGTGAGTCGTGAAGGCGTTGTGCCGACGGAGTTCAT CGAGCAACACACTTTGCAATAA
Upstream 100 bases:
>100_bases TATCTCTACAGTCGTGCCGGTTCGTCCAATTCGTCTGCCAAGCGCAACCGAATCCGAAGCAGGTGACGCTGAGCCAGGTA ACGCCTGATAGGAGTCTCCT
Downstream 100 bases:
>100_bases AAGCCTGACAAAGCGGTTGTGCCGCAACGGCAGGCATTCTGTAGCATTGGTCGGCGCGCCGTGGGTGCGTCTTTGCTTTA TCAGATGGAGAGCGCTATGG
Product: HSR1-like GTP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MFFERHGGGERVILVHLDGQDPEAREDPQEFQELANSAGAETVAFFNVPRHRPTAKYLIGSGKVEELRDLVHAEEADLVI FNHTLTPSQERNLERVFECRVIDRTGLILDIFAQRARTHEGKLQVELAQLDHMSTRLVRGWTHLERQGGGIGMRGPGETQ LETDRRLLRVRLRQIKRRLEKVRSQREQSRRGRSRADIPTVSLVGYTNAGKSTLFNNVTKSEVYAADQLFATLDPTLRRL DLDDLGPIVLADTVGFIRHLPHKLVEAFRSTLEESSNSDLLLHVIDAAEPDRMLQIEQVMVVLGEIGAQDLPILEVYNKL DLLEGVEPQIQRDENGKPQRVWLSARDGTGLELLEQAIAELLGSDLFVGTLRLPQRFARLRAQFFELGAVQKEEHDEEGV SLLAVRLPRSELNRLVSREGVVPTEFIEQHTLQ
Sequences:
>Translated_433_residues MFFERHGGGERVILVHLDGQDPEAREDPQEFQELANSAGAETVAFFNVPRHRPTAKYLIGSGKVEELRDLVHAEEADLVI FNHTLTPSQERNLERVFECRVIDRTGLILDIFAQRARTHEGKLQVELAQLDHMSTRLVRGWTHLERQGGGIGMRGPGETQ LETDRRLLRVRLRQIKRRLEKVRSQREQSRRGRSRADIPTVSLVGYTNAGKSTLFNNVTKSEVYAADQLFATLDPTLRRL DLDDLGPIVLADTVGFIRHLPHKLVEAFRSTLEESSNSDLLLHVIDAAEPDRMLQIEQVMVVLGEIGAQDLPILEVYNKL DLLEGVEPQIQRDENGKPQRVWLSARDGTGLELLEQAIAELLGSDLFVGTLRLPQRFARLRAQFFELGAVQKEEHDEEGV SLLAVRLPRSELNRLVSREGVVPTEFIEQHTLQ >Mature_433_residues MFFERHGGGERVILVHLDGQDPEAREDPQEFQELANSAGAETVAFFNVPRHRPTAKYLIGSGKVEELRDLVHAEEADLVI FNHTLTPSQERNLERVFECRVIDRTGLILDIFAQRARTHEGKLQVELAQLDHMSTRLVRGWTHLERQGGGIGMRGPGETQ LETDRRLLRVRLRQIKRRLEKVRSQREQSRRGRSRADIPTVSLVGYTNAGKSTLFNNVTKSEVYAADQLFATLDPTLRRL DLDDLGPIVLADTVGFIRHLPHKLVEAFRSTLEESSNSDLLLHVIDAAEPDRMLQIEQVMVVLGEIGAQDLPILEVYNKL DLLEGVEPQIQRDENGKPQRVWLSARDGTGLELLEQAIAELLGSDLFVGTLRLPQRFARLRAQFFELGAVQKEEHDEEGV SLLAVRLPRSELNRLVSREGVVPTEFIEQHTLQ
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310133116, Length=226, Percent_Identity=37.6106194690265, Blast_Score=133, Evalue=4e-31, Organism=Homo sapiens, GI310133118, Length=228, Percent_Identity=37.280701754386, Blast_Score=132, Evalue=4e-31, Organism=Homo sapiens, GI310124269, Length=208, Percent_Identity=38.4615384615385, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI310124267, Length=208, Percent_Identity=38.4615384615385, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI310124171, Length=208, Percent_Identity=38.4615384615385, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI310124169, Length=208, Percent_Identity=38.4615384615385, Blast_Score=130, Evalue=2e-30, Organism=Escherichia coli, GI1790615, Length=418, Percent_Identity=59.8086124401914, Blast_Score=494, Evalue=1e-141, Organism=Caenorhabditis elegans, GI17561038, Length=379, Percent_Identity=28.2321899736148, Blast_Score=122, Evalue=3e-28, Organism=Drosophila melanogaster, GI24650079, Length=325, Percent_Identity=33.2307692307692, Blast_Score=129, Evalue=3e-30, Organism=Drosophila melanogaster, GI20129375, Length=137, Percent_Identity=38.6861313868613, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 49086; Mature: 49086
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFERHGGGERVILVHLDGQDPEAREDPQEFQELANSAGAETVAFFNVPRHRPTAKYLIG CCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHEEC SGKVEELRDLVHAEEADLVIFNHTLTPSQERNLERVFECRVIDRTGLILDIFAQRARTHE CCCHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCC GKLQVELAQLDHMSTRLVRGWTHLERQGGGIGMRGPGETQLETDRRLLRVRLRQIKRRLE CCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH KVRSQREQSRRGRSRADIPTVSLVGYTNAGKSTLFNNVTKSEVYAADQLFATLDPTLRRL HHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHCHHHHHC DLDDLGPIVLADTVGFIRHLPHKLVEAFRSTLEESSNSDLLLHVIDAAEPDRMLQIEQVM CHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHH VVLGEIGAQDLPILEVYNKLDLLEGVEPQIQRDENGKPQRVWLSARDGTGLELLEQAIAE HHHHHCCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHH LLGSDLFVGTLRLPQRFARLRAQFFELGAVQKEEHDEEGVSLLAVRLPRSELNRLVSREG HHCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCC VVPTEFIEQHTLQ CCCHHHHHHHCCC >Mature Secondary Structure MFFERHGGGERVILVHLDGQDPEAREDPQEFQELANSAGAETVAFFNVPRHRPTAKYLIG CCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHEEC SGKVEELRDLVHAEEADLVIFNHTLTPSQERNLERVFECRVIDRTGLILDIFAQRARTHE CCCHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCC GKLQVELAQLDHMSTRLVRGWTHLERQGGGIGMRGPGETQLETDRRLLRVRLRQIKRRLE CCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH KVRSQREQSRRGRSRADIPTVSLVGYTNAGKSTLFNNVTKSEVYAADQLFATLDPTLRRL HHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHCHHHHHC DLDDLGPIVLADTVGFIRHLPHKLVEAFRSTLEESSNSDLLLHVIDAAEPDRMLQIEQVM CHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHH VVLGEIGAQDLPILEVYNKLDLLEGVEPQIQRDENGKPQRVWLSARDGTGLELLEQAIAE HHHHHCCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHH LLGSDLFVGTLRLPQRFARLRAQFFELGAVQKEEHDEEGVSLLAVRLPRSELNRLVSREG HHCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCC VVPTEFIEQHTLQ CCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]