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The map label for this gene is rsgA [H]

Identifier: 77456742

GI number: 77456742

Start: 596185

End: 597216

Strand: Reverse

Name: rsgA [H]

Synonym: Pfl01_0514

Alternate gene names: 77456742

Gene position: 597216-596185 (Counterclockwise)

Preceding gene: 77456745

Following gene: 77456739

Centisome position: 9.28

GC content: 66.18

Gene sequence:

>1032_bases
ATGGCCAAACGCCAACTCAATCGTCGTCAAAACTGGCGCATCGAAAAGATTCAGGGCGAGCGCGCCGCCCGCGCCGCCAA
ACGCGAGTCCTCGGCCGTCGAGGCCCTCGAAGGCGGCGATCTGGGCCCGGAACAGCACGGTCTGGTGATCGCCCACTTCG
GTGTGCAGGTCGAGGTCGAGGCCGTTGACGGCGAACTGGCCGGCCAGGTCTTCCGCTGCCACCTGCGCGCCAACCTGCCA
GCGCTGGTGACCGGCGACCAGGTGGTCTGGCGCGCCGGCAACCAGGGCATCGGCGTGATCGTCGCGCAACTGCCGCGCAC
CACCGAGCTGTGCCGCCCGGACAGCCGTGGCCAGCTCAAACCGGTGGCCGCCAACGTCGACATGATCGTCATCGTCTTCG
CCCCGCTGCCCGAGCCCCATGCGAACCTGATCGATCGTTATCTGGTCGCCGCCGAGCACGCCGGCATCCGCCCGTTGCTC
CTGCTGAACAAATTCGACCTGATCGACGAACAGAACGCCCCGGCGCTGAATGCCCTGCTGGCGGTCTATCGCACGCTGGG
TTATCCGGTACTGGAAGTCTCGGCGCACCACGGCAACGGCATGGAGCAATTGCAGAAGCAGCTCGACGGGCGCATCAGCG
TGTTCGTCGGCCAGTCCGGTGTCGGCAAGTCATCCTTGGTCAACAGCCTGCTGCCGGAAGTCGAAACCCGCGTCGGCCCG
CTGTCCGAGTTGTCGGGCCAAGGCACGCACACCACAACCACCGCACGCCTGTTCCACTTCCCCGGCGGCGGCGAGCTGAT
CGACTCCCCGGGCATCCGTGAATTCGGCCTCGGCCACGTCAGCCGCGCCGACGTCGAAGCCGGCTTCATCGAGTTCAACG
ATCTGCTCGGCACCTGCCGCTTCCGCGACTGCAAGCACGACCGCGAACCGGGATGCGCACTGCTCAAAGCCCTGGAAGAC
GGCCGCGTGCAGCAGCAGCGAATGAACAGCTACCGCTCGATCATCGCCAGCCTGCCGGAAAACGGTTACTAG

Upstream 100 bases:

>100_bases
CTCCTGAGCAATGCTGCGCAGTTTAGCCTAGGCAGCCTGCCGGGCGTGCTAAACTCGCGGCCGTTTTACCTAATCGCTGT
ATTCTTCAGACGGAACACCC

Downstream 100 bases:

>100_bases
GCTTTCAAGTAACCAGACACAAAAAAGCCGACATCGCTGTCGGCTTTTTTGTGGGTCACTGTTTCGGCGCGGGAGCCGGT
GCAGCAGGCACCGGGGCTGG

Product: ribosome-associated GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MAKRQLNRRQNWRIEKIQGERAARAAKRESSAVEALEGGDLGPEQHGLVIAHFGVQVEVEAVDGELAGQVFRCHLRANLP
ALVTGDQVVWRAGNQGIGVIVAQLPRTTELCRPDSRGQLKPVAANVDMIVIVFAPLPEPHANLIDRYLVAAEHAGIRPLL
LLNKFDLIDEQNAPALNALLAVYRTLGYPVLEVSAHHGNGMEQLQKQLDGRISVFVGQSGVGKSSLVNSLLPEVETRVGP
LSELSGQGTHTTTTARLFHFPGGGELIDSPGIREFGLGHVSRADVEAGFIEFNDLLGTCRFRDCKHDREPGCALLKALED
GRVQQQRMNSYRSIIASLPENGY

Sequences:

>Translated_343_residues
MAKRQLNRRQNWRIEKIQGERAARAAKRESSAVEALEGGDLGPEQHGLVIAHFGVQVEVEAVDGELAGQVFRCHLRANLP
ALVTGDQVVWRAGNQGIGVIVAQLPRTTELCRPDSRGQLKPVAANVDMIVIVFAPLPEPHANLIDRYLVAAEHAGIRPLL
LLNKFDLIDEQNAPALNALLAVYRTLGYPVLEVSAHHGNGMEQLQKQLDGRISVFVGQSGVGKSSLVNSLLPEVETRVGP
LSELSGQGTHTTTTARLFHFPGGGELIDSPGIREFGLGHVSRADVEAGFIEFNDLLGTCRFRDCKHDREPGCALLKALED
GRVQQQRMNSYRSIIASLPENGY
>Mature_342_residues
AKRQLNRRQNWRIEKIQGERAARAAKRESSAVEALEGGDLGPEQHGLVIAHFGVQVEVEAVDGELAGQVFRCHLRANLPA
LVTGDQVVWRAGNQGIGVIVAQLPRTTELCRPDSRGQLKPVAANVDMIVIVFAPLPEPHANLIDRYLVAAEHAGIRPLLL
LNKFDLIDEQNAPALNALLAVYRTLGYPVLEVSAHHGNGMEQLQKQLDGRISVFVGQSGVGKSSLVNSLLPEVETRVGPL
SELSGQGTHTTTTARLFHFPGGGELIDSPGIREFGLGHVSRADVEAGFIEFNDLLGTCRFRDCKHDREPGCALLKALEDG
RVQQQRMNSYRSIIASLPENGY

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=347, Percent_Identity=44.956772334294, Blast_Score=305, Evalue=2e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR016027
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 37371; Mature: 37240

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRQLNRRQNWRIEKIQGERAARAAKRESSAVEALEGGDLGPEQHGLVIAHFGVQVEVE
CCCHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECEEEEEE
AVDGELAGQVFRCHLRANLPALVTGDQVVWRAGNQGIGVIVAQLPRTTELCRPDSRGQLK
ECCCHHHHHHEEEEECCCCCEEEECCEEEEECCCCCEEEEEECCCCCHHHCCCCCCCCEE
PVAANVDMIVIVFAPLPEPHANLIDRYLVAAEHAGIRPLLLLNKFDLIDEQNAPALNALL
EEECCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCHHHHHHH
AVYRTLGYPVLEVSAHHGNGMEQLQKQLDGRISVFVGQSGVGKSSLVNSLLPEVETRVGP
HHHHHHCCCEEEEECCCCCCHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCC
LSELSGQGTHTTTTARLFHFPGGGELIDSPGIREFGLGHVSRADVEAGFIEFNDLLGTCR
HHHHCCCCCCEEEEEEEEECCCCCCEECCCCCHHHCCCCCCCCCCCCCEEEHHHHHHHHH
FRDCKHDREPGCALLKALEDGRVQQQRMNSYRSIIASLPENGY
CCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AKRQLNRRQNWRIEKIQGERAARAAKRESSAVEALEGGDLGPEQHGLVIAHFGVQVEVE
CCHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECEEEEEE
AVDGELAGQVFRCHLRANLPALVTGDQVVWRAGNQGIGVIVAQLPRTTELCRPDSRGQLK
ECCCHHHHHHEEEEECCCCCEEEECCEEEEECCCCCEEEEEECCCCCHHHCCCCCCCCEE
PVAANVDMIVIVFAPLPEPHANLIDRYLVAAEHAGIRPLLLLNKFDLIDEQNAPALNALL
EEECCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCHHHHHHH
AVYRTLGYPVLEVSAHHGNGMEQLQKQLDGRISVFVGQSGVGKSSLVNSLLPEVETRVGP
HHHHHHCCCEEEEECCCCCCHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCC
LSELSGQGTHTTTTARLFHFPGGGELIDSPGIREFGLGHVSRADVEAGFIEFNDLLGTCR
HHHHCCCCCCEEEEEEEEECCCCCCEECCCCCHHHCCCCCCCCCCCCCEEEHHHHHHHHH
FRDCKHDREPGCALLKALEDGRVQQQRMNSYRSIIASLPENGY
CCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA