| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456739
Identifier: 77456739
GI number: 77456739
Start: 592501
End: 594039
Strand: Reverse
Name: 77456739
Synonym: Pfl01_0511
Alternate gene names: NA
Gene position: 594039-592501 (Counterclockwise)
Preceding gene: 77456742
Following gene: 77456738
Centisome position: 9.23
GC content: 64.13
Gene sequence:
>1539_bases ATGGCTAATGAAACGAACGTCCCACACGTAAAGCCGACCACACTCGATGGCTGGGTGAAGCTGCTCGACAGCGTTCGTCT GCCAGTGCCGCAAGACGCCCATGACCGGGTCTGCCGGGCGATTCGCGATGACCGCAGCTCGCTGCGCGACATCGCCGACC TGATGCAGGACAGCCCGGCGCTGGCCCTGAGCATCATCCGCGAAGCCAACCGCCACACCCACGGCAACATGACTGCGCCT GCGGAAAACCTCGAAGTGGCGATCAATCGACTCGGCCTTGCCCGTACCGAAGAACTGCTCGCCCGCCTGCCCGCCGAACC TGCCGCGCAAATCCCCCAGGCCCTGCGCCAGTTGCAGATGATCAGCCAGCACGCCACGCAACAGGCCAACGGTTTTTTCG CCAGTCGCCTGGCGCGACTGTGGCAGGACATTCATTGGGGCAGCCTGTTGTTTCTGTCGCCGCTGTGGCCGTTGGCGCTG ACCTTTCCCCAACTGCTTGAAGAGTGGGAAGTGCGGGTTATCCACAAGGGTGAATCGGCGCGAGTCGTGGAAAAGCAGCT GTTCGGCGTGCGCCTGCTGAAGATCGGCGAGGCGCTGGTGCAAGTCTGGCGTCTGCCGGTCTGGGTGCAGCAAGGTTATC GGCTGCTGCTGACCGAACAGCGCGAACTGGTCAAAGTCCTGCGCATTGCCCGCGACGTCGATCATCCGTTGCGCCAGCAG AATCGCCTCGATGACGACCCGACCCTGCGCCGCTGGCTCAACCAGCCGGCCAACACCGTGTTGCTGGCCAACGGACTGGC ACTCTCGGCGCAACAGGCCTGGGACAGTCCGCACAGTGAGCGCTGGCAATTCCTGACCAGCCTCTACCTGCAAATCTCGA TGGACGAGGTGCAACAACAATTGCACCAACAGGCCGCCGTCAGCGCTCGCCATCATTTCATGCCGGACCTTTGGCACCCG GCGCTTTCGCTGCTGTGGCCGTGGGGTACCCGTCGCCTTCCAGCCGGAATGCTGCCGGCTGCCGCGCCGTCCGCTGAAGA CCTGAGCCAGTGGCGCCGGCAATGCGCCGAACTGCTGGCGGTGCCAAGTCGCTTCACCAACGCCATGAGCCTGACCGTCG CCGCCCGCGACGCGCTGGTCGCCAGCGGCATGCGTCGGGTGATGATCCTGATGACCGACCGCGGCCACGCCAATCTGCGC GTCCATCAAACCTCCGGGTTGCCGAAGGACGCCGCTGCGCTGAATTTCGTCGTCAGCCAGAGTTCGGTGCTGCAACGCTT GCTCGCGCAGCAGGCGCAAGTGCGGATCACCCCGGACAACAACGCCCAGTTTTCCGCCCTGCTGCCGCCCTCGCTGCGCG CCCTTTTCCGTGGTGAACACCTGTTCCTGCGTTCACTGGTGAACAACGGCCGGGTGATCATGATCGTGGTCGCCGACCAG GGTGGCGGTCCGTTCGCCGACATCACCGTCCAAGCCTTCGGCAAAACCGCGCAGTGCATCGAGAAAGCCCTGCACAGTTT TAGCCAGCGCGGCCAATGA
Upstream 100 bases:
>100_bases ACTTATCGGCAAAACTGCGCCAGACTATAGCCAGTTCAGGCGAAAAGCCAATTTAGCCCATGCCGGGCGCGTCTACAGTC AGTGAAGATCTCGTCCAGAC
Downstream 100 bases:
>100_bases CAGCTACAATCCCTCCCCTTTGTGCTCTGGAGACCTCACATGTCTGATTTCTCTGGCCTGGCCCTGGTGATCGAGCCGAG CGATCTGCTGCCGCGCCTCG
Product: signal transduction protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase HDOD
Number of amino acids: Translated: 512; Mature: 511
Protein sequence:
>512_residues MANETNVPHVKPTTLDGWVKLLDSVRLPVPQDAHDRVCRAIRDDRSSLRDIADLMQDSPALALSIIREANRHTHGNMTAP AENLEVAINRLGLARTEELLARLPAEPAAQIPQALRQLQMISQHATQQANGFFASRLARLWQDIHWGSLLFLSPLWPLAL TFPQLLEEWEVRVIHKGESARVVEKQLFGVRLLKIGEALVQVWRLPVWVQQGYRLLLTEQRELVKVLRIARDVDHPLRQQ NRLDDDPTLRRWLNQPANTVLLANGLALSAQQAWDSPHSERWQFLTSLYLQISMDEVQQQLHQQAAVSARHHFMPDLWHP ALSLLWPWGTRRLPAGMLPAAAPSAEDLSQWRRQCAELLAVPSRFTNAMSLTVAARDALVASGMRRVMILMTDRGHANLR VHQTSGLPKDAAALNFVVSQSSVLQRLLAQQAQVRITPDNNAQFSALLPPSLRALFRGEHLFLRSLVNNGRVIMIVVADQ GGGPFADITVQAFGKTAQCIEKALHSFSQRGQ
Sequences:
>Translated_512_residues MANETNVPHVKPTTLDGWVKLLDSVRLPVPQDAHDRVCRAIRDDRSSLRDIADLMQDSPALALSIIREANRHTHGNMTAP AENLEVAINRLGLARTEELLARLPAEPAAQIPQALRQLQMISQHATQQANGFFASRLARLWQDIHWGSLLFLSPLWPLAL TFPQLLEEWEVRVIHKGESARVVEKQLFGVRLLKIGEALVQVWRLPVWVQQGYRLLLTEQRELVKVLRIARDVDHPLRQQ NRLDDDPTLRRWLNQPANTVLLANGLALSAQQAWDSPHSERWQFLTSLYLQISMDEVQQQLHQQAAVSARHHFMPDLWHP ALSLLWPWGTRRLPAGMLPAAAPSAEDLSQWRRQCAELLAVPSRFTNAMSLTVAARDALVASGMRRVMILMTDRGHANLR VHQTSGLPKDAAALNFVVSQSSVLQRLLAQQAQVRITPDNNAQFSALLPPSLRALFRGEHLFLRSLVNNGRVIMIVVADQ GGGPFADITVQAFGKTAQCIEKALHSFSQRGQ >Mature_511_residues ANETNVPHVKPTTLDGWVKLLDSVRLPVPQDAHDRVCRAIRDDRSSLRDIADLMQDSPALALSIIREANRHTHGNMTAPA ENLEVAINRLGLARTEELLARLPAEPAAQIPQALRQLQMISQHATQQANGFFASRLARLWQDIHWGSLLFLSPLWPLALT FPQLLEEWEVRVIHKGESARVVEKQLFGVRLLKIGEALVQVWRLPVWVQQGYRLLLTEQRELVKVLRIARDVDHPLRQQN RLDDDPTLRRWLNQPANTVLLANGLALSAQQAWDSPHSERWQFLTSLYLQISMDEVQQQLHQQAAVSARHHFMPDLWHPA LSLLWPWGTRRLPAGMLPAAAPSAEDLSQWRRQCAELLAVPSRFTNAMSLTVAARDALVASGMRRVMILMTDRGHANLRV HQTSGLPKDAAALNFVVSQSSVLQRLLAQQAQVRITPDNNAQFSALLPPSLRALFRGEHLFLRSLVNNGRVIMIVVADQG GGPFADITVQAFGKTAQCIEKALHSFSQRGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57547; Mature: 57416
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANETNVPHVKPTTLDGWVKLLDSVRLPVPQDAHDRVCRAIRDDRSSLRDIADLMQDSPA CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH LALSIIREANRHTHGNMTAPAENLEVAINRLGLARTEELLARLPAEPAAQIPQALRQLQM HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHH ISQHATQQANGFFASRLARLWQDIHWGSLLFLSPLWPLALTFPQLLEEWEVRVIHKGESA HHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHCEEEEECCCCH RVVEKQLFGVRLLKIGEALVQVWRLPVWVQQGYRLLLTEQRELVKVLRIARDVDHPLRQQ HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCEEHHHHHHHHHHHHHHHHCCHHHHHH NRLDDDPTLRRWLNQPANTVLLANGLALSAQQAWDSPHSERWQFLTSLYLQISMDEVQQQ CCCCCCHHHHHHHCCCCCEEEEECCCEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH LHQQAAVSARHHFMPDLWHPALSLLWPWGTRRLPAGMLPAAAPSAEDLSQWRRQCAELLA HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH VPSRFTNAMSLTVAARDALVASGMRRVMILMTDRGHANLRVHQTSGLPKDAAALNFVVSQ HHHHHHHHHHHHHHHHHHHHHHCHHEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHH SSVLQRLLAQQAQVRITPDNNAQFSALLPPSLRALFRGEHLFLRSLVNNGRVIMIVVADQ HHHHHHHHHHCCEEEECCCCCCCEEEECCHHHHHHHCCHHHHHHHHHCCCCEEEEEEECC GGGPFADITVQAFGKTAQCIEKALHSFSQRGQ CCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure ANETNVPHVKPTTLDGWVKLLDSVRLPVPQDAHDRVCRAIRDDRSSLRDIADLMQDSPA CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHH LALSIIREANRHTHGNMTAPAENLEVAINRLGLARTEELLARLPAEPAAQIPQALRQLQM HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHH ISQHATQQANGFFASRLARLWQDIHWGSLLFLSPLWPLALTFPQLLEEWEVRVIHKGESA HHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHCEEEEECCCCH RVVEKQLFGVRLLKIGEALVQVWRLPVWVQQGYRLLLTEQRELVKVLRIARDVDHPLRQQ HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCEEHHHHHHHHHHHHHHHHCCHHHHHH NRLDDDPTLRRWLNQPANTVLLANGLALSAQQAWDSPHSERWQFLTSLYLQISMDEVQQQ CCCCCCHHHHHHHCCCCCEEEEECCCEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH LHQQAAVSARHHFMPDLWHPALSLLWPWGTRRLPAGMLPAAAPSAEDLSQWRRQCAELLA HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH VPSRFTNAMSLTVAARDALVASGMRRVMILMTDRGHANLRVHQTSGLPKDAAALNFVVSQ HHHHHHHHHHHHHHHHHHHHHHCHHEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHH SSVLQRLLAQQAQVRITPDNNAQFSALLPPSLRALFRGEHLFLRSLVNNGRVIMIVVADQ HHHHHHHHHHCCEEEECCCCCCCEEEECCHHHHHHHCCHHHHHHHHHCCCCEEEEEEECC GGGPFADITVQAFGKTAQCIEKALHSFSQRGQ CCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA