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The map label for this gene is psd

Identifier: 77456737

GI number: 77456737

Start: 590767

End: 591627

Strand: Reverse

Name: psd

Synonym: Pfl01_0509

Alternate gene names: 77456737

Gene position: 591627-590767 (Counterclockwise)

Preceding gene: 77456738

Following gene: 77456735

Centisome position: 9.19

GC content: 62.02

Gene sequence:

>861_bases
ATGAAAGAGCGTTTGTTTATCATCAGCCAGTACCTGCTGCCGCATCACTTGCTGTCGCGCCTTGCCGGCTGCATTGCCGA
GTGCCGCGTGCGCTGGTTCAAGAATGCCTTCACCACCTGGTTCGCCAAGCGTTATCAAGTGGACATGTCGCAGGCACTGG
TTGAAGACGTGACCGCTTACGAGCACTTCAACGCCTTCTTCACCCGCGCCTTGAAAGACGGCGCTCGCCCACTGGATCAG
ACCCCGGGCGCGATCCTCAGCCCGGCCGACGGTGCGATCAGCCAGCTCGGCCCGATCGAACACGGTCGTATCTTCCAGGC
CAAGGGCCACAGCTTCAGCGTGCTGGAACTGCTGGGCGGCGACGCGGCCAATGCGGCACCGTTCATGGGCGGTGAATTCG
CGACTGTTTACCTGTCGCCGAAGGACTACCACCGCGTGCACATGCCGCTGGCCGGCACCCTGCGAGAAATGGTCTACATC
CCGGGCCGGATCTTCTCGGTCAACCAGACCACCGCAGAAAACGTTCCGGAACTGTTCGCCCGCAACGAGCGTGTAGCGTG
CATCTTCGACACCGAGCGCGGGCCAATGGCCGTGGTGCTGGTGGGCGCGATGATCGTGGCCTCGATCGAAACCGTGTGGG
CCGGTCTGGTCACGCCACCGAAGCGCGAACTGAAAACCTTCCGTTACGACGAAGCCGCCCGTGCGCCGATTCATCTGGAG
AAAGGTGCGGAACTGGGGCGCTTCAAGCTGGGTTCGACCGCGATCGTGCTGTTCGGGCCGGATCAGGTGAAATGGGTTGA
AGAATTGAAAGCCGGCTCGCCGGTACAGATGGGTCAGGCCCTGGCACAGTCGAACGCCTGA

Upstream 100 bases:

>100_bases
CCTCGGTTATCCGCGGGTCAAGGGCTACGCCGGTTCCTGGGGCGAATGGGGCAACCACCCCGACACCCCCGTCGAGCTTT
AAGGATTTTTAAGGACAGTC

Downstream 100 bases:

>100_bases
ACCTGTTGATCCGCCCTTTCGCACGTCTGCGAAGGGGCGGACACGACCTGAGTGGCGCCGTTACTCTATCTGCCCACGGA
AGCCGATCGGCCCTTCGTTG

Product: phosphatidylserine decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MKERLFIISQYLLPHHLLSRLAGCIAECRVRWFKNAFTTWFAKRYQVDMSQALVEDVTAYEHFNAFFTRALKDGARPLDQ
TPGAILSPADGAISQLGPIEHGRIFQAKGHSFSVLELLGGDAANAAPFMGGEFATVYLSPKDYHRVHMPLAGTLREMVYI
PGRIFSVNQTTAENVPELFARNERVACIFDTERGPMAVVLVGAMIVASIETVWAGLVTPPKRELKTFRYDEAARAPIHLE
KGAELGRFKLGSTAIVLFGPDQVKWVEELKAGSPVQMGQALAQSNA

Sequences:

>Translated_286_residues
MKERLFIISQYLLPHHLLSRLAGCIAECRVRWFKNAFTTWFAKRYQVDMSQALVEDVTAYEHFNAFFTRALKDGARPLDQ
TPGAILSPADGAISQLGPIEHGRIFQAKGHSFSVLELLGGDAANAAPFMGGEFATVYLSPKDYHRVHMPLAGTLREMVYI
PGRIFSVNQTTAENVPELFARNERVACIFDTERGPMAVVLVGAMIVASIETVWAGLVTPPKRELKTFRYDEAARAPIHLE
KGAELGRFKLGSTAIVLFGPDQVKWVEELKAGSPVQMGQALAQSNA
>Mature_286_residues
MKERLFIISQYLLPHHLLSRLAGCIAECRVRWFKNAFTTWFAKRYQVDMSQALVEDVTAYEHFNAFFTRALKDGARPLDQ
TPGAILSPADGAISQLGPIEHGRIFQAKGHSFSVLELLGGDAANAAPFMGGEFATVYLSPKDYHRVHMPLAGTLREMVYI
PGRIFSVNQTTAENVPELFARNERVACIFDTERGPMAVVLVGAMIVASIETVWAGLVTPPKRELKTFRYDEAARAPIHLE
KGAELGRFKLGSTAIVLFGPDQVKWVEELKAGSPVQMGQALAQSNA

Specific function: Unknown

COG id: COG0688

COG function: function code I; Phosphatidylserine decarboxylase

Gene ontology:

Cell location: Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphatidylserine decarboxylase family. Type 1 subfamily

Homologues:

Organism=Homo sapiens, GI13489112, Length=297, Percent_Identity=30.976430976431, Blast_Score=121, Evalue=6e-28,
Organism=Escherichia coli, GI1790604, Length=278, Percent_Identity=54.3165467625899, Blast_Score=294, Evalue=4e-81,
Organism=Caenorhabditis elegans, GI71980843, Length=282, Percent_Identity=30.8510638297872, Blast_Score=126, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI71980840, Length=283, Percent_Identity=30.7420494699647, Blast_Score=125, Evalue=2e-29,
Organism=Saccharomyces cerevisiae, GI6321609, Length=224, Percent_Identity=29.9107142857143, Blast_Score=94, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6324160, Length=161, Percent_Identity=32.9192546583851, Blast_Score=80, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24649526, Length=307, Percent_Identity=30.2931596091205, Blast_Score=122, Evalue=3e-28,
Organism=Drosophila melanogaster, GI24649528, Length=307, Percent_Identity=30.2931596091205, Blast_Score=122, Evalue=3e-28,
Organism=Drosophila melanogaster, GI24649524, Length=307, Percent_Identity=30.2931596091205, Blast_Score=122, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSD_PSEPF (Q3KJ03)

Other databases:

- EMBL:   CP000094
- RefSeq:   YP_346242.1
- STRING:   Q3KJ03
- GeneID:   3713150
- GenomeReviews:   CP000094_GR
- KEGG:   pfo:Pfl01_0509
- eggNOG:   COG0688
- HOGENOM:   HBG302256
- OMA:   YFDQDLH
- ProtClustDB:   PRK00044
- BioCyc:   PFLU205922:PFL_0509-MONOMER
- HAMAP:   MF_00662
- InterPro:   IPR003817
- InterPro:   IPR005221
- PANTHER:   PTHR10067
- TIGRFAMs:   TIGR00163

Pfam domain/function: PF02666 PS_Dcarbxylase

EC number: =4.1.1.65

Molecular weight: Translated: 31591; Mature: 31591

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKERLFIISQYLLPHHLLSRLAGCIAECRVRWFKNAFTTWFAKRYQVDMSQALVEDVTAY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EHFNAFFTRALKDGARPLDQTPGAILSPADGAISQLGPIEHGRIFQAKGHSFSVLELLGG
HHHHHHHHHHHHHCCCCCCCCCCCEECCCCCHHHHCCCCCCCEEEEECCCCEEHHHHHCC
DAANAAPFMGGEFATVYLSPKDYHRVHMPLAGTLREMVYIPGRIFSVNQTTAENVPELFA
CCCCCCCCCCCCEEEEEECCCCCCEEECCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHH
RNERVACIFDTERGPMAVVLVGAMIVASIETVWAGLVTPPKRELKTFRYDEAARAPIHLE
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEEC
KGAELGRFKLGSTAIVLFGPDQVKWVEELKAGSPVQMGQALAQSNA
CCCCCCCEEECCEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKERLFIISQYLLPHHLLSRLAGCIAECRVRWFKNAFTTWFAKRYQVDMSQALVEDVTAY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EHFNAFFTRALKDGARPLDQTPGAILSPADGAISQLGPIEHGRIFQAKGHSFSVLELLGG
HHHHHHHHHHHHHCCCCCCCCCCCEECCCCCHHHHCCCCCCCEEEEECCCCEEHHHHHCC
DAANAAPFMGGEFATVYLSPKDYHRVHMPLAGTLREMVYIPGRIFSVNQTTAENVPELFA
CCCCCCCCCCCCEEEEEECCCCCCEEECCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHH
RNERVACIFDTERGPMAVVLVGAMIVASIETVWAGLVTPPKRELKTFRYDEAARAPIHLE
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEEC
KGAELGRFKLGSTAIVLFGPDQVKWVEELKAGSPVQMGQALAQSNA
CCCCCCCEEECCEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA