| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456732
Identifier: 77456732
GI number: 77456732
Start: 584335
End: 585048
Strand: Direct
Name: 77456732
Synonym: Pfl01_0504
Alternate gene names: NA
Gene position: 584335-585048 (Clockwise)
Preceding gene: 77456731
Following gene: 77456734
Centisome position: 9.08
GC content: 63.31
Gene sequence:
>714_bases ATGATGACTTCTCTGCGCCCCCTTATTTTCCTGCTCGCCGGCGTTCTTGGCCTGGCGGGTTGCAGTGTTCACCAGCCGGT GTCGCTGTATCAGCTGGACAGCGGAAGTCCGGCTCAGCCTGCGCAAAGCGCGGGCATGGCAGTTTTGCTGGGCCCTGTAA TCGTTGCCGATTACCTGCAACGTGAAACCCTGTTGCAGCGTCAGCCGGACGGCAGCCTGCAGGCCTCGGTCGATGGCCGC TGGGCCGGCAGCCTGTCTTCGGACATCGATCAGTTGCTTCTGCGTCAGGTTGCCGGGCATCTGGACAGTCAACGCGTAGT GCTGGCGCCAGCGACCCTGGGCTTCACCCCGGATGTGCAGGTGCTGTTGACCATCACTCGTCTGGATTCCGGTGCCAAGC AACCGGCGATTCTGGACGCGCAGTGGCGCCTGATCGACCGTCGTGGTCAGGTGCGGGACAACCGCATCGTGCATCTGCAG GAACAGCATGCCGGCACCACCGCCGCGCAGGTGCAGGCGCAGGGCGTGTTGTTGCAGCGTCTGGCCGAGCAGCTGTCGGT GGCGCTCAAGCCGTTGGCCAATCAGCCACCGGTTGCCGAAGCACCGCGCAAACCGGCACCGAAGCCGGCAGCACCGGCGG CGGAAGCCGAGAAACAGCCGAAGATCCCGATGGCTTCACCTATTCGTACGGATATGGAAGTGTTTCGCTTCTAA
Upstream 100 bases:
>100_bases CGGATGATATGGCCTTTCCAAGCGCCGGCGTGGCCGAGCGTTCTTCATATTTGTTGAGTATTTTCACTGTGGTCAGCCTT GTGGCGGCCACCTGGACGGG
Downstream 100 bases:
>100_bases GGCTGGATCGAGTCAGAACAGAGCCCGCCTTGTGCGGGCTTTGTTGTTTCTGAGGTCGGAAGATCAAAAGCTACCCTCAC CCCAGCCCTCTCCCGGAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MMTSLRPLIFLLAGVLGLAGCSVHQPVSLYQLDSGSPAQPAQSAGMAVLLGPVIVADYLQRETLLQRQPDGSLQASVDGR WAGSLSSDIDQLLLRQVAGHLDSQRVVLAPATLGFTPDVQVLLTITRLDSGAKQPAILDAQWRLIDRRGQVRDNRIVHLQ EQHAGTTAAQVQAQGVLLQRLAEQLSVALKPLANQPPVAEAPRKPAPKPAAPAAEAEKQPKIPMASPIRTDMEVFRF
Sequences:
>Translated_237_residues MMTSLRPLIFLLAGVLGLAGCSVHQPVSLYQLDSGSPAQPAQSAGMAVLLGPVIVADYLQRETLLQRQPDGSLQASVDGR WAGSLSSDIDQLLLRQVAGHLDSQRVVLAPATLGFTPDVQVLLTITRLDSGAKQPAILDAQWRLIDRRGQVRDNRIVHLQ EQHAGTTAAQVQAQGVLLQRLAEQLSVALKPLANQPPVAEAPRKPAPKPAAPAAEAEKQPKIPMASPIRTDMEVFRF >Mature_237_residues MMTSLRPLIFLLAGVLGLAGCSVHQPVSLYQLDSGSPAQPAQSAGMAVLLGPVIVADYLQRETLLQRQPDGSLQASVDGR WAGSLSSDIDQLLLRQVAGHLDSQRVVLAPATLGFTPDVQVLLTITRLDSGAKQPAILDAQWRLIDRRGQVRDNRIVHLQ EQHAGTTAAQVQAQGVLLQRLAEQLSVALKPLANQPPVAEAPRKPAPKPAAPAAEAEKQPKIPMASPIRTDMEVFRF
Specific function: Unknown
COG id: COG3009
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25439; Mature: 25439
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTSLRPLIFLLAGVLGLAGCSVHQPVSLYQLDSGSPAQPAQSAGMAVLLGPVIVADYLQ CCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHH RETLLQRQPDGSLQASVDGRWAGSLSSDIDQLLLRQVAGHLDSQRVVLAPATLGFTPDVQ HHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHH VLLTITRLDSGAKQPAILDAQWRLIDRRGQVRDNRIVHLQEQHAGTTAAQVQAQGVLLQR HEEEEEHHCCCCCCCEEECHHHHHHHCCCCCCCCEEEEEEHHCCCCHHHHHHHHHHHHHH LAEQLSVALKPLANQPPVAEAPRKPAPKPAAPAAEAEKQPKIPMASPIRTDMEVFRF HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHCC >Mature Secondary Structure MMTSLRPLIFLLAGVLGLAGCSVHQPVSLYQLDSGSPAQPAQSAGMAVLLGPVIVADYLQ CCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHHH RETLLQRQPDGSLQASVDGRWAGSLSSDIDQLLLRQVAGHLDSQRVVLAPATLGFTPDVQ HHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHH VLLTITRLDSGAKQPAILDAQWRLIDRRGQVRDNRIVHLQEQHAGTTAAQVQAQGVLLQR HEEEEEHHCCCCCCCEEECHHHHHHHCCCCCCCCEEEEEEHHCCCCHHHHHHHHHHHHHH LAEQLSVALKPLANQPPVAEAPRKPAPKPAAPAAEAEKQPKIPMASPIRTDMEVFRF HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA