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The map label for this gene is ydiU [C]

Identifier: 77456672

GI number: 77456672

Start: 501131

End: 502594

Strand: Reverse

Name: ydiU [C]

Synonym: Pfl01_0444

Alternate gene names: 77456672

Gene position: 502594-501131 (Counterclockwise)

Preceding gene: 77456673

Following gene: 77456671

Centisome position: 7.81

GC content: 62.77

Gene sequence:

>1464_bases
TTGAAAGCCCTCGACGAACTGACCTTCGACAACCGCTTCGCCCGCCTGGGCGATGCGTTCTCGGCCCACGTGCTGCCCGA
ACCGATCGACAATCCGCGACTGGTGGTTGCCAGCCCGGCGGCCCTGGCGCTGCTGGATCTCGACCCGGCAATGGCCGACA
CCCAGGAATTTGCCGAATTGTTCGGCGGCCACAAGCTATGGGCCGACGCCGAGCCGCGGGCGATGGTCTATTCCGGACAT
CAGTTCGGCGGCTACACCCCGCAACTAGGCGATGGGCGCGGATTGTTGCTGGGCGAGGTCTACAACGCCGCCGGCGAGCA
CTGGGACTTGCATCTGAAGGGCGCCGGGCAGACACCGTTCTCGCGCATGGGCGACGGTCGCGCGGTGCTGCGTTCGTCGA
TCCGCGAGTTTCTCGCTTCCGAAGCGCTGCATGCGCTGAACATCCCGTCTTCACGCGCCGCCTGCGTGATCGGCTCCGAC
ACCCCGGTCTGGCGCGAGAAACAGGAACGCGCCGCGATGGTGCTGCGCCTGGCGCCGAGCCACATCCGTTTCGGCCACTT
CGAATACTTCTATTACACCAAGCGCCCCGAACAGCAGAAGCTGCTCGGCGAACACGTGTTGGCGATGCACTACCCCGAGT
GTTTGGAACAGCCGGAACCGTATCTGGCGATGTTCCGCGAAATCGTCGAGCGCAACGCCGAACTGATTGCCAAGTGGCAG
GCGTACGGCTTCTGCCACGGGGTGATGAACACCGACAACATGTCGATCCTCGGCATCACCTTTGACTTCGGCCCGTTCGC
CTTCCTCGACGATTTCGACGCGAACTTCATTTGCAACCACTCCGACGATCAGGGCCGCTACTCCTTCAGCAATCAGGTGC
CGGTCGGCCAGTGGAACCTCAGCACCCTGGCCCAGGCCCTCACGCCGTTAATCAGCGTCGAAGCCCTGCGCGAAACCCTA
GGCCTGTACCTGCCACTGTTCCAGGCGCACTACCTCGACCTGATGCGCCGCCGCCTCGGCTTCACCACCGCCGAGGACGA
CGACCAGATGCTCCTGGAACAACTGCTGCAACTGATGCAGAACAGCGGCGTCGACTACACGCTGTTCTTCCGCCGACTGG
GCGAAGAGTCAGCCGAGCAGGCCGTCGCTCGCCTGCGCGATGACTTCGTCGATATCAAGGGTTTCGATGCCTGGGGCGAG
CGCTATGTCGCCCGTGTCGCACGCGACGGCGCGACCGATCAGGAACAGCGCCGTGCGCGCATGCATGCGGTGAATCCGCT
GTACATCCTGCGCAATTACCTGGCGCAGAAGGCAATCGATGCTGCCGAGCAGGGTGACTATTCAGAAGTGCGCAGATTGC
ATGCGGTGCTGAGCAATCCATTCGAGGAACAGCCCGGAATGGAGAGTTACGCGGAACGTCCGCCGGAGTGGGGCAAGCAT
TTGGAGATCAGTTGTTCGTCGTAA

Upstream 100 bases:

>100_bases
CAGCGATGACCAGAAACCGTTGCAGGAACCGCCGCCGGCCAAACTCGACTAACCCGGCTAATCCCAGCAGAATGCTCGGA
CATTCTGCTGGAGCCGGTCC

Downstream 100 bases:

>100_bases
GCGGGAACGACTGAACCTTGATAATCGATCCGTACGGCTCCAGATCAGTCGTACGATCCCGTTTTATTCACCGAGCCGAT
CATGACCGACCCACTCCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 487; Mature: 487

Protein sequence:

>487_residues
MKALDELTFDNRFARLGDAFSAHVLPEPIDNPRLVVASPAALALLDLDPAMADTQEFAELFGGHKLWADAEPRAMVYSGH
QFGGYTPQLGDGRGLLLGEVYNAAGEHWDLHLKGAGQTPFSRMGDGRAVLRSSIREFLASEALHALNIPSSRAACVIGSD
TPVWREKQERAAMVLRLAPSHIRFGHFEYFYYTKRPEQQKLLGEHVLAMHYPECLEQPEPYLAMFREIVERNAELIAKWQ
AYGFCHGVMNTDNMSILGITFDFGPFAFLDDFDANFICNHSDDQGRYSFSNQVPVGQWNLSTLAQALTPLISVEALRETL
GLYLPLFQAHYLDLMRRRLGFTTAEDDDQMLLEQLLQLMQNSGVDYTLFFRRLGEESAEQAVARLRDDFVDIKGFDAWGE
RYVARVARDGATDQEQRRARMHAVNPLYILRNYLAQKAIDAAEQGDYSEVRRLHAVLSNPFEEQPGMESYAERPPEWGKH
LEISCSS

Sequences:

>Translated_487_residues
MKALDELTFDNRFARLGDAFSAHVLPEPIDNPRLVVASPAALALLDLDPAMADTQEFAELFGGHKLWADAEPRAMVYSGH
QFGGYTPQLGDGRGLLLGEVYNAAGEHWDLHLKGAGQTPFSRMGDGRAVLRSSIREFLASEALHALNIPSSRAACVIGSD
TPVWREKQERAAMVLRLAPSHIRFGHFEYFYYTKRPEQQKLLGEHVLAMHYPECLEQPEPYLAMFREIVERNAELIAKWQ
AYGFCHGVMNTDNMSILGITFDFGPFAFLDDFDANFICNHSDDQGRYSFSNQVPVGQWNLSTLAQALTPLISVEALRETL
GLYLPLFQAHYLDLMRRRLGFTTAEDDDQMLLEQLLQLMQNSGVDYTLFFRRLGEESAEQAVARLRDDFVDIKGFDAWGE
RYVARVARDGATDQEQRRARMHAVNPLYILRNYLAQKAIDAAEQGDYSEVRRLHAVLSNPFEEQPGMESYAERPPEWGKH
LEISCSS
>Mature_487_residues
MKALDELTFDNRFARLGDAFSAHVLPEPIDNPRLVVASPAALALLDLDPAMADTQEFAELFGGHKLWADAEPRAMVYSGH
QFGGYTPQLGDGRGLLLGEVYNAAGEHWDLHLKGAGQTPFSRMGDGRAVLRSSIREFLASEALHALNIPSSRAACVIGSD
TPVWREKQERAAMVLRLAPSHIRFGHFEYFYYTKRPEQQKLLGEHVLAMHYPECLEQPEPYLAMFREIVERNAELIAKWQ
AYGFCHGVMNTDNMSILGITFDFGPFAFLDDFDANFICNHSDDQGRYSFSNQVPVGQWNLSTLAQALTPLISVEALRETL
GLYLPLFQAHYLDLMRRRLGFTTAEDDDQMLLEQLLQLMQNSGVDYTLFFRRLGEESAEQAVARLRDDFVDIKGFDAWGE
RYVARVARDGATDQEQRRARMHAVNPLYILRNYLAQKAIDAAEQGDYSEVRRLHAVLSNPFEEQPGMESYAERPPEWGKH
LEISCSS

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family

Homologues:

Organism=Homo sapiens, GI32880229, Length=381, Percent_Identity=44.6194225721785, Blast_Score=297, Evalue=1e-80,
Organism=Escherichia coli, GI1787999, Length=462, Percent_Identity=49.7835497835498, Blast_Score=464, Evalue=1e-132,
Organism=Saccharomyces cerevisiae, GI6325034, Length=418, Percent_Identity=33.9712918660287, Blast_Score=213, Evalue=8e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y444_PSEPF (Q3KJ68)

Other databases:

- EMBL:   CP000094
- RefSeq:   YP_346177.1
- STRING:   Q3KJ68
- GeneID:   3712452
- GenomeReviews:   CP000094_GR
- KEGG:   pfo:Pfl01_0444
- eggNOG:   COG0397
- HOGENOM:   HBG683993
- OMA:   FGSYNPR
- ProtClustDB:   PRK00029
- BioCyc:   PFLU205922:PFL_0444-MONOMER
- HAMAP:   MF_00692
- InterPro:   IPR003846

Pfam domain/function: PF02696 UPF0061

EC number: NA

Molecular weight: Translated: 55090; Mature: 55090

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALDELTFDNRFARLGDAFSAHVLPEPIDNPRLVVASPAALALLDLDPAMADTQEFAEL
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCHHCCHHHHHHH
FGGHKLWADAEPRAMVYSGHQFGGYTPQLGDGRGLLLGEVYNAAGEHWDLHLKGAGQTPF
HCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCEEEHHHHHHCCCCCEEEEEECCCCCCH
SRMGDGRAVLRSSIREFLASEALHALNIPSSRAACVIGSDTPVWREKQERAAMVLRLAPS
HHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCC
HIRFGHFEYFYYTKRPEQQKLLGEHVLAMHYPECLEQPEPYLAMFREIVERNAELIAKWQ
CCEECCEEEEEEECCCHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHCCHHHHHHHH
AYGFCHGVMNTDNMSILGITFDFGPFAFLDDFDANFICNHSDDQGRYSFSNQVPVGQWNL
HHHEEECCCCCCCEEEEEEEECCCCCHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCH
STLAQALTPLISVEALRETLGLYLPLFQAHYLDLMRRRLGFTTAEDDDQMLLEQLLQLMQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
NSGVDYTLFFRRLGEESAEQAVARLRDDFVDIKGFDAWGERYVARVARDGATDQEQRRAR
CCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
MHAVNPLYILRNYLAQKAIDAAEQGDYSEVRRLHAVLSNPFEEQPGMESYAERPPEWGKH
HHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCE
LEISCSS
EEEEECC
>Mature Secondary Structure
MKALDELTFDNRFARLGDAFSAHVLPEPIDNPRLVVASPAALALLDLDPAMADTQEFAEL
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCHHCCHHHHHHH
FGGHKLWADAEPRAMVYSGHQFGGYTPQLGDGRGLLLGEVYNAAGEHWDLHLKGAGQTPF
HCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCEEEHHHHHHCCCCCEEEEEECCCCCCH
SRMGDGRAVLRSSIREFLASEALHALNIPSSRAACVIGSDTPVWREKQERAAMVLRLAPS
HHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCC
HIRFGHFEYFYYTKRPEQQKLLGEHVLAMHYPECLEQPEPYLAMFREIVERNAELIAKWQ
CCEECCEEEEEEECCCHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHCCHHHHHHHH
AYGFCHGVMNTDNMSILGITFDFGPFAFLDDFDANFICNHSDDQGRYSFSNQVPVGQWNL
HHHEEECCCCCCCEEEEEEEECCCCCHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCH
STLAQALTPLISVEALRETLGLYLPLFQAHYLDLMRRRLGFTTAEDDDQMLLEQLLQLMQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
NSGVDYTLFFRRLGEESAEQAVARLRDDFVDIKGFDAWGERYVARVARDGATDQEQRRAR
CCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
MHAVNPLYILRNYLAQKAIDAAEQGDYSEVRRLHAVLSNPFEEQPGMESYAERPPEWGKH
HHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCE
LEISCSS
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA