| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456657
Identifier: 77456657
GI number: 77456657
Start: 487541
End: 488701
Strand: Reverse
Name: 77456657
Synonym: Pfl01_0429
Alternate gene names: NA
Gene position: 488701-487541 (Counterclockwise)
Preceding gene: 77456658
Following gene: 77456656
Centisome position: 7.59
GC content: 63.57
Gene sequence:
>1161_bases ATGATGGTGGTGATTTTCTGGCTGATGGCCCTGGCGCTGTTCTTCGTGGCTACCGGGGTCGGCCGGCATTTCGGGCTGAT CCCAATCGTCAGTCAATTGCTGCTGGCCAGCTTCGGCCTGCCGCTGCTGATGTACTTCTGGATCGAGCCGGGCTGGCAAC TCAACGGCGCCGAACTGATCGCGCCGGGCTGGCTGAAAAACCTCTACAGCCTGAGTTTCGCCCTGCTGCTGGGGCACATC CTCAGCGACGTGATCGACCTGCGTCTGGACCGGCAGAGCGTGAAGATCGCCCTGCCGAGTTTTGCCGTGCCGTTCACCTG CGGTCTGGCCACGGCGTACTGGCTGTTGCCGGTGCAACCGTGGATCAATTCGCTGGCCATCGGTCTGGTGTTCGCCATCA CCGCGATCCCGGTGTTGTACCTGTACCTGCGCCACATCGACTACCCGCCCGCCGCCACCCGGCGTCTGGTGCAGACCGCG ATCCTGATCGACCTGACCTGCTGGACGCTGTTCGGCCTCGCCCAGGGCAGCCTGCACCTGAGCAGTCTGTTGCTGCCGCT GGGGCTGGCCTGCGTGCCGGTGCTGCTGCGGGTGTTCGGCATACGCCGGCCATTGACCTACAGCCTCGGTTTTTTTGCGC TGTTGGTGCTGGCCGAACACTACAAACTCAACGCGCTGATTTTTGGCATCGGCTATCTGCTGTGCATGGCCGCGCTCAAA GTGCCACTGGTATTGCCGATCCCGGCGCACTGGATGAACCGCTTGCAGACGTGGGTGGCGATTCCGCTGATCCTGACTTT CGGCATCGTCCAGATCGACGTGCACAGCGCCCTCGCCAGCCTCGGCGCCGTGCAATGGGCGGCGCTGCTGCTGTTGCCGG TCGCCAGCAAAATCCTGGGCAACTGGCTCGGCCTCGGCTGGGCCGGCGCGTCGTTCGCAGGCGCCAGCCGCTGGCGCGAA AGCGTGCTGCTGAACATTCGCGGCTTGAGCGAAATCGTCTTTCTCAACCTGCTGTTGCAACAACGACTCATCAGCCCGGC GCTGTACTTTGCGCTGGTGCTGATGGGGCTGATCGCGACGCTGCTGCCGGCCTTCATCGGCCTGCACCGGGCGTCGCTGA ACCCTATTGCCGTACCCAGGAGCTCACGTGCCAATCGTTGA
Upstream 100 bases:
>100_bases ACTTCGGGCTGTCGGTGAGCCTCGGCCTGGCGTTCAGCTTCATGCTCGCGCCGTGGGCCGGACGTCAGCCCCACGCGGTT GCCGTCACGGAGCCTGCAGC
Downstream 100 bases:
>100_bases AATGGAATCCCGTCAGGTCGTGATCATCGGCGCCGGCCCCTCCGGCGCCATCGCCGCCGCATTGCTCAAGCGCAAGGGAC ACGACGTGCTGGTGATCGAG
Product: Sodium/hydrogen exchanger
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MMVVIFWLMALALFFVATGVGRHFGLIPIVSQLLLASFGLPLLMYFWIEPGWQLNGAELIAPGWLKNLYSLSFALLLGHI LSDVIDLRLDRQSVKIALPSFAVPFTCGLATAYWLLPVQPWINSLAIGLVFAITAIPVLYLYLRHIDYPPAATRRLVQTA ILIDLTCWTLFGLAQGSLHLSSLLLPLGLACVPVLLRVFGIRRPLTYSLGFFALLVLAEHYKLNALIFGIGYLLCMAALK VPLVLPIPAHWMNRLQTWVAIPLILTFGIVQIDVHSALASLGAVQWAALLLLPVASKILGNWLGLGWAGASFAGASRWRE SVLLNIRGLSEIVFLNLLLQQRLISPALYFALVLMGLIATLLPAFIGLHRASLNPIAVPRSSRANR
Sequences:
>Translated_386_residues MMVVIFWLMALALFFVATGVGRHFGLIPIVSQLLLASFGLPLLMYFWIEPGWQLNGAELIAPGWLKNLYSLSFALLLGHI LSDVIDLRLDRQSVKIALPSFAVPFTCGLATAYWLLPVQPWINSLAIGLVFAITAIPVLYLYLRHIDYPPAATRRLVQTA ILIDLTCWTLFGLAQGSLHLSSLLLPLGLACVPVLLRVFGIRRPLTYSLGFFALLVLAEHYKLNALIFGIGYLLCMAALK VPLVLPIPAHWMNRLQTWVAIPLILTFGIVQIDVHSALASLGAVQWAALLLLPVASKILGNWLGLGWAGASFAGASRWRE SVLLNIRGLSEIVFLNLLLQQRLISPALYFALVLMGLIATLLPAFIGLHRASLNPIAVPRSSRANR >Mature_386_residues MMVVIFWLMALALFFVATGVGRHFGLIPIVSQLLLASFGLPLLMYFWIEPGWQLNGAELIAPGWLKNLYSLSFALLLGHI LSDVIDLRLDRQSVKIALPSFAVPFTCGLATAYWLLPVQPWINSLAIGLVFAITAIPVLYLYLRHIDYPPAATRRLVQTA ILIDLTCWTLFGLAQGSLHLSSLLLPLGLACVPVLLRVFGIRRPLTYSLGFFALLVLAEHYKLNALIFGIGYLLCMAALK VPLVLPIPAHWMNRLQTWVAIPLILTFGIVQIDVHSALASLGAVQWAALLLLPVASKILGNWLGLGWAGASFAGASRWRE SVLLNIRGLSEIVFLNLLLQQRLISPALYFALVLMGLIATLLPAFIGLHRASLNPIAVPRSSRANR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42405; Mature: 42405
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMVVIFWLMALALFFVATGVGRHFGLIPIVSQLLLASFGLPLLMYFWIEPGWQLNGAELI CHHHHHHHHHHHHHHHHHHHCHHCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCEE APGWLKNLYSLSFALLLGHILSDVIDLRLDRQSVKIALPSFAVPFTCGLATAYWLLPVQP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHEEECCCCCCHHHHHHHHHHHHHCCHH WINSLAIGLVFAITAIPVLYLYLRHIDYPPAATRRLVQTAILIDLTCWTLFGLAQGSLHL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH SSLLLPLGLACVPVLLRVFGIRRPLTYSLGFFALLVLAEHYKLNALIFGIGYLLCMAALK HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VPLVLPIPAHWMNRLQTWVAIPLILTFGIVQIDVHSALASLGAVQWAALLLLPVASKILG CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NWLGLGWAGASFAGASRWRESVLLNIRGLSEIVFLNLLLQQRLISPALYFALVLMGLIAT HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLPAFIGLHRASLNPIAVPRSSRANR HHHHHHHHHHCCCCCEECCCCCCCCC >Mature Secondary Structure MMVVIFWLMALALFFVATGVGRHFGLIPIVSQLLLASFGLPLLMYFWIEPGWQLNGAELI CHHHHHHHHHHHHHHHHHHHCHHCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCEE APGWLKNLYSLSFALLLGHILSDVIDLRLDRQSVKIALPSFAVPFTCGLATAYWLLPVQP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHEEECCCCCCHHHHHHHHHHHHHCCHH WINSLAIGLVFAITAIPVLYLYLRHIDYPPAATRRLVQTAILIDLTCWTLFGLAQGSLHL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH SSLLLPLGLACVPVLLRVFGIRRPLTYSLGFFALLVLAEHYKLNALIFGIGYLLCMAALK HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VPLVLPIPAHWMNRLQTWVAIPLILTFGIVQIDVHSALASLGAVQWAALLLLPVASKILG CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NWLGLGWAGASFAGASRWRESVLLNIRGLSEIVFLNLLLQQRLISPALYFALVLMGLIAT HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLPAFIGLHRASLNPIAVPRSSRANR HHHHHHHHHHCCCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA