| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456656
Identifier: 77456656
GI number: 77456656
Start: 486307
End: 487539
Strand: Reverse
Name: 77456656
Synonym: Pfl01_0428
Alternate gene names: NA
Gene position: 487539-486307 (Counterclockwise)
Preceding gene: 77456657
Following gene: 77456655
Centisome position: 7.57
GC content: 63.5
Gene sequence:
>1233_bases ATGGAATCCCGTCAGGTCGTGATCATCGGCGCCGGCCCCTCCGGCGCCATCGCCGCCGCATTGCTCAAGCGCAAGGGACA CGACGTGCTGGTGATCGAGCGTCAGCATTTCCCGAGGTTCTCCATCGGTGAAAGCCTGCTCTGTCATTGCCTGGATTTCG TCGAGGAAGCCGGCATGCTCGAGGCGGTGAATGCCGCCGGGTTCCAGCGCAAGAACGGTGCGGCGTTCGCCTGGGGCGAG CGCTACAGCGCCTTCGATTTTGGTGACACCTTCACCGCCGGCAAGCCGACGACCCTGCAGGTGCAACGCGCCGACTTCGA CAAATTGCTGGCCGATCAGGCCACGTTGCAGGGCGCGGAAATCCGCTATGGCGACGCGATTGTCAGCGTCGATTTCGAAC GTCCGCGACCGCAGTTGAATGTGCGCCGCGAAGACGCCAGCGAGTACCGCGTTGAAGCCGACTTTGTCCTCGATGCCAGC GGCTACGGCCGCGTGCTGTCGCGCCTGCTCGACCTCGAAGCGCCGTCGAATTTCCCGGTTCGCCAGGCGGTCTTCACTCA CGTTGAAGACCACATTGATTACCCCGGCTTCGACCGTGAAAAAATCCTCATCACCACCCATCCGCAGCACCGCGACATCT GGTTCTGGTCGATCCCGTTCAGCAACGGTCGCTGCTCCGTCGGCGTGGTGGCTGCCGCTGAACATTTCGCAGGTCGCGAT ACCGACCTCGACGCCTGCCTGCGCGGGTTCATCGCCGAAACCCCGAGCCTGGCCAAAGTGCTGAACAACGCCGTATGGGA TACCCCGGCGCGCACTCTCGGCGGGTATGCGGCCAACGTCAAAACCCTGCACGGCCCGGGCTTCGCGCTGCTGGGCAACG CGGCGGAGTTTCTCGACCCGGTGTTCTCCTCGGGCGTGACCATTGCCATGCGTTCGGCGAGCATGGCCGCCGCTGTGCTG CACCGGCAGTTGCAGGGCGAAACCGTGGACTGGCAACGGGAGTTCGCCGAGCCGCTGAAACGTGGGGTCGACACCTTCCG CTGCTACGTCGAAGGCTGGTACGCCGGCACCTTTCAGGACGTGATTTTCCACGAGCAAGGCTCGCCGGAAATCCGCCGCA TGATCTGCTCGATCCTCGCCGGTTACGCATGGGACGAACGCAACCCGTTCGTCAGTGAAGCGCGCCGTCGGCTGAAGATG ATCTCCGAACTCTGTGCAAGGGACGACACATGA
Upstream 100 bases:
>100_bases ATGGGGCTGATCGCGACGCTGCTGCCGGCCTTCATCGGCCTGCACCGGGCGTCGCTGAACCCTATTGCCGTACCCAGGAG CTCACGTGCCAATCGTTGAA
Downstream 100 bases:
>100_bases ATTACCTGAGCGACAATTACGTCGAGGAAACCCGCTTCGGCTTCTGGTTCCTGCGCAGCCACACCTGGCAGCACCATGTG CTGCGCGTGGCAATCAACGA
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: Oxidoreductase Protein; FAD Dependent Oxidoreductase; Oxidoreductase; Dehydrogenase; Halogenase; FADH2 Dependent Halogenase; Pyridine Nucleotide-Disulfide Oxidoreductase; Hydroxylase; Geranylgeranyl Reductase; Alkylhalidase PltA; Dehyrogenase; Oxidoreductase Transmembrane Protein; Alkylhalidase CmlS; LOW QUALITY PROTEIN Dehydrogenase; Monooxygenase; Dehydrogenases; Flavoprotein/Dehydrogenase; Dehydrogenase/Oxidoreductase; FixC-Family Flavoprotein Dehydrogenase; FAD Oxidoreductase; Alkylhalidase; LOW QUALITY PROTEIN Oxidoreductase
Number of amino acids: Translated: 410; Mature: 410
Protein sequence:
>410_residues MESRQVVIIGAGPSGAIAAALLKRKGHDVLVIERQHFPRFSIGESLLCHCLDFVEEAGMLEAVNAAGFQRKNGAAFAWGE RYSAFDFGDTFTAGKPTTLQVQRADFDKLLADQATLQGAEIRYGDAIVSVDFERPRPQLNVRREDASEYRVEADFVLDAS GYGRVLSRLLDLEAPSNFPVRQAVFTHVEDHIDYPGFDREKILITTHPQHRDIWFWSIPFSNGRCSVGVVAAAEHFAGRD TDLDACLRGFIAETPSLAKVLNNAVWDTPARTLGGYAANVKTLHGPGFALLGNAAEFLDPVFSSGVTIAMRSASMAAAVL HRQLQGETVDWQREFAEPLKRGVDTFRCYVEGWYAGTFQDVIFHEQGSPEIRRMICSILAGYAWDERNPFVSEARRRLKM ISELCARDDT
Sequences:
>Translated_410_residues MESRQVVIIGAGPSGAIAAALLKRKGHDVLVIERQHFPRFSIGESLLCHCLDFVEEAGMLEAVNAAGFQRKNGAAFAWGE RYSAFDFGDTFTAGKPTTLQVQRADFDKLLADQATLQGAEIRYGDAIVSVDFERPRPQLNVRREDASEYRVEADFVLDAS GYGRVLSRLLDLEAPSNFPVRQAVFTHVEDHIDYPGFDREKILITTHPQHRDIWFWSIPFSNGRCSVGVVAAAEHFAGRD TDLDACLRGFIAETPSLAKVLNNAVWDTPARTLGGYAANVKTLHGPGFALLGNAAEFLDPVFSSGVTIAMRSASMAAAVL HRQLQGETVDWQREFAEPLKRGVDTFRCYVEGWYAGTFQDVIFHEQGSPEIRRMICSILAGYAWDERNPFVSEARRRLKM ISELCARDDT >Mature_410_residues MESRQVVIIGAGPSGAIAAALLKRKGHDVLVIERQHFPRFSIGESLLCHCLDFVEEAGMLEAVNAAGFQRKNGAAFAWGE RYSAFDFGDTFTAGKPTTLQVQRADFDKLLADQATLQGAEIRYGDAIVSVDFERPRPQLNVRREDASEYRVEADFVLDAS GYGRVLSRLLDLEAPSNFPVRQAVFTHVEDHIDYPGFDREKILITTHPQHRDIWFWSIPFSNGRCSVGVVAAAEHFAGRD TDLDACLRGFIAETPSLAKVLNNAVWDTPARTLGGYAANVKTLHGPGFALLGNAAEFLDPVFSSGVTIAMRSASMAAAVL HRQLQGETVDWQREFAEPLKRGVDTFRCYVEGWYAGTFQDVIFHEQGSPEIRRMICSILAGYAWDERNPFVSEARRRLKM ISELCARDDT
Specific function: Unknown
COG id: COG0644
COG function: function code C; Dehydrogenases (flavoproteins)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45552; Mature: 45552
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESRQVVIIGAGPSGAIAAALLKRKGHDVLVIERQHFPRFSIGESLLCHCLDFVEEAGML CCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCHH EAVNAAGFQRKNGAAFAWGERYSAFDFGDTFTAGKPTTLQVQRADFDKLLADQATLQGAE HHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCE IRYGDAIVSVDFERPRPQLNVRREDASEYRVEADFVLDASGYGRVLSRLLDLEAPSNFPV EEECCEEEEEECCCCCCCCCEECCCCCCEEEEEEEEEECCCHHHHHHHHHHCCCCCCCCH RQAVFTHVEDHIDYPGFDREKILITTHPQHRDIWFWSIPFSNGRCSVGVVAAAEHFAGRD HHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCEEEEEEHHHHHCCCC TDLDACLRGFIAETPSLAKVLNNAVWDTPARTLGGYAANVKTLHGPGFALLGNAAEFLDP CCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHCCCCCCCEEECCCCCHHHCCHHHHHHH VFSSGVTIAMRSASMAAAVLHRQLQGETVDWQREFAEPLKRGVDTFRCYVEGWYAGTFQD HHHCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEHHHEEEECCCHHH VIFHEQGSPEIRRMICSILAGYAWDERNPFVSEARRRLKMISELCARDDT HHEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MESRQVVIIGAGPSGAIAAALLKRKGHDVLVIERQHFPRFSIGESLLCHCLDFVEEAGML CCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCHH EAVNAAGFQRKNGAAFAWGERYSAFDFGDTFTAGKPTTLQVQRADFDKLLADQATLQGAE HHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCE IRYGDAIVSVDFERPRPQLNVRREDASEYRVEADFVLDASGYGRVLSRLLDLEAPSNFPV EEECCEEEEEECCCCCCCCCEECCCCCCEEEEEEEEEECCCHHHHHHHHHHCCCCCCCCH RQAVFTHVEDHIDYPGFDREKILITTHPQHRDIWFWSIPFSNGRCSVGVVAAAEHFAGRD HHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCEEEEEEHHHHHCCCC TDLDACLRGFIAETPSLAKVLNNAVWDTPARTLGGYAANVKTLHGPGFALLGNAAEFLDP CCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHCCCCCCCEEECCCCCHHHCCHHHHHHH VFSSGVTIAMRSASMAAAVLHRQLQGETVDWQREFAEPLKRGVDTFRCYVEGWYAGTFQD HHHCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEHHHEEEECCCHHH VIFHEQGSPEIRRMICSILAGYAWDERNPFVSEARRRLKMISELCARDDT HHEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA