| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is tatA
Identifier: 77456610
GI number: 77456610
Start: 437342
End: 437620
Strand: Reverse
Name: tatA
Synonym: Pfl01_0382
Alternate gene names: 77456610
Gene position: 437620-437342 (Counterclockwise)
Preceding gene: 77456611
Following gene: 77456609
Centisome position: 6.8
GC content: 59.14
Gene sequence:
>279_bases ATGGGCATTTTTGACTGGAAACACTGGATCGTCATCCTGGTGGTCGTGGTACTGGTGTTCGGTACCAAGAAACTGAAGAA CCTCGGCACCGACGTTGGCGAGTCGATCAAGGGCTTCCGTAAAGCCATGAACGACGACGAAAAACCGGCCGATCCGACCG TCACGCCTGCGCAACCGGTACCGCCGGTACAGCCGCAAGCCACCGCTCAGGCCAACCCGCCGCACACCATCGACGTGCAG GCGCAGAAAGTCGAAGAGCCGATCCGCAAAGACGTGTGA
Upstream 100 bases:
>100_bases GCGGTGCTGGATGAACTGGATCGCCGTTTCGGCCTGTCCGGACACGTCGAGAAAGCCTCGCGCCCGTCCGCCTGAACAAC TTCAAGAGAGGAACAGCAAC
Downstream 100 bases:
>100_bases GCACTGACTAATGTTTGGTATCAGCTTCTCTGAACTGCTGCTCGTCGGCCTCGTCGCCCTGCTGGTGCTGGGCCCCGAGC GTCTGCCGGGCGCTGCACGC
Product: twin arginine translocase protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MGIFDWKHWIVILVVVVLVFGTKKLKNLGTDVGESIKGFRKAMNDDEKPADPTVTPAQPVPPVQPQATAQANPPHTIDVQ AQKVEEPIRKDV
Sequences:
>Translated_92_residues MGIFDWKHWIVILVVVVLVFGTKKLKNLGTDVGESIKGFRKAMNDDEKPADPTVTPAQPVPPVQPQATAQANPPHTIDVQ AQKVEEPIRKDV >Mature_91_residues GIFDWKHWIVILVVVVLVFGTKKLKNLGTDVGESIKGFRKAMNDDEKPADPTVTPAQPVPPVQPQATAQANPPHTIDVQA QKVEEPIRKDV
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatA/E family
Homologues:
Organism=Escherichia coli, GI87082337, Length=90, Percent_Identity=41.1111111111111, Blast_Score=64, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TATA_PSEPF (Q3KJD0)
Other databases:
- EMBL: CP000094 - RefSeq: YP_346115.1 - STRING: Q3KJD0 - GeneID: 3712645 - GenomeReviews: CP000094_GR - KEGG: pfo:Pfl01_0382 - eggNOG: COG1826 - HOGENOM: HBG751935 - OMA: HWIVLLV - ProtClustDB: PRK00442 - BioCyc: PFLU205922:PFL_0382-MONOMER - HAMAP: MF_00236 - InterPro: IPR003369 - InterPro: IPR006312 - TIGRFAMs: TIGR01411
Pfam domain/function: PF02416 MttA_Hcf106
EC number: NA
Molecular weight: Translated: 10136; Mature: 10005
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xc691cb8)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIFDWKHWIVILVVVVLVFGTKKLKNLGTDVGESIKGFRKAMNDDEKPADPTVTPAQPV CCCCHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC PPVQPQATAQANPPHTIDVQAQKVEEPIRKDV CCCCCCCCCCCCCCCEECCCHHHHHHHHHCCH >Mature Secondary Structure GIFDWKHWIVILVVVVLVFGTKKLKNLGTDVGESIKGFRKAMNDDEKPADPTVTPAQPV CCCHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC PPVQPQATAQANPPHTIDVQAQKVEEPIRKDV CCCCCCCCCCCCCCCEECCCHHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA