| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456581
Identifier: 77456581
GI number: 77456581
Start: 403026
End: 403628
Strand: Direct
Name: 77456581
Synonym: Pfl01_0353
Alternate gene names: NA
Gene position: 403026-403628 (Clockwise)
Preceding gene: 77456580
Following gene: 77456583
Centisome position: 6.26
GC content: 58.04
Gene sequence:
>603_bases ATGACCGCGCCCTGGCAGCCGTTGCTCGATTGGTGGTTCGGTCATGCCGAATCGGCTACTGAAGTGACGGCGCAACAGGG CGGGTTGTGGTTCGGCAAGAAAGACAGCCAGGATCTCGAAGCGCGTGAGCGTTTCGGGGTCTTTGTCGATCAGGCCCTTG CTGGCGAATTGAGCGAATGGACGCAACGTCCCGAAGGTTGGCTGGCGCTGGTGCTGCTGCTCGACCAACTCCCGCGAATG ATCTTTCGCGATACGTCCAAGGCTTTCTCGGGTGATCTACGGGCCCAAAAACTGGTGGCTCAGGGGATTGCCGCAGATTT CGATCGGCAGTTGAAACCGATCCAGCGACTCTTCATCTACCTCGTCTTCGAACACTGCGAAAACCTCGCGGTGCAGAATG AGGCTGTTTCGCGATTTATCGAACTGGTGGCTGAACAGCCGGAAGCGGAGCGTGGGGTGTTTGCCGACAACCTGGACTAT GCCGAGCGGCATCAGCGGGTGATTGCGCGGTTTGGACGGTTTCCGCATCGCAATGCGGTGTTGGGGCGGGAGTCTACGGT TGAGGAATTGGAGTTTTTGAAAGAGCCGGGTTCGCGGTTTTAG
Upstream 100 bases:
>100_bases TCTCGATATCAAGCCTGAAGGCCTGCACCAGCGCGTAGCGGTGTTCCTCGGCTCGAAAGAAGAAGTCGCCCGCGCCACGG CGTACCACAAGGAATAAACC
Downstream 100 bases:
>100_bases GGCGATTTTCGGCAACCTCAAAAAGCGGCCCTCACCCTAACCCTCTCCCAGAGGGAGAGGGGACTGACCGAGGTGTTTGG TCGTGATACATCGACCTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MTAPWQPLLDWWFGHAESATEVTAQQGGLWFGKKDSQDLEARERFGVFVDQALAGELSEWTQRPEGWLALVLLLDQLPRM IFRDTSKAFSGDLRAQKLVAQGIAADFDRQLKPIQRLFIYLVFEHCENLAVQNEAVSRFIELVAEQPEAERGVFADNLDY AERHQRVIARFGRFPHRNAVLGRESTVEELEFLKEPGSRF
Sequences:
>Translated_200_residues MTAPWQPLLDWWFGHAESATEVTAQQGGLWFGKKDSQDLEARERFGVFVDQALAGELSEWTQRPEGWLALVLLLDQLPRM IFRDTSKAFSGDLRAQKLVAQGIAADFDRQLKPIQRLFIYLVFEHCENLAVQNEAVSRFIELVAEQPEAERGVFADNLDY AERHQRVIARFGRFPHRNAVLGRESTVEELEFLKEPGSRF >Mature_199_residues TAPWQPLLDWWFGHAESATEVTAQQGGLWFGKKDSQDLEARERFGVFVDQALAGELSEWTQRPEGWLALVLLLDQLPRMI FRDTSKAFSGDLRAQKLVAQGIAADFDRQLKPIQRLFIYLVFEHCENLAVQNEAVSRFIELVAEQPEAERGVFADNLDYA ERHQRVIARFGRFPHRNAVLGRESTVEELEFLKEPGSRF
Specific function: Unknown
COG id: COG3803
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22991; Mature: 22860
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPWQPLLDWWFGHAESATEVTAQQGGLWFGKKDSQDLEARERFGVFVDQALAGELSEW CCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TQRPEGWLALVLLLDQLPRMIFRDTSKAFSGDLRAQKLVAQGIAADFDRQLKPIQRLFIY HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVFEHCENLAVQNEAVSRFIELVAEQPEAERGVFADNLDYAERHQRVIARFGRFPHRNAV HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC LGRESTVEELEFLKEPGSRF CCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure TAPWQPLLDWWFGHAESATEVTAQQGGLWFGKKDSQDLEARERFGVFVDQALAGELSEW CCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TQRPEGWLALVLLLDQLPRMIFRDTSKAFSGDLRAQKLVAQGIAADFDRQLKPIQRLFIY HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVFEHCENLAVQNEAVSRFIELVAEQPEAERGVFADNLDYAERHQRVIARFGRFPHRNAV HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC LGRESTVEELEFLKEPGSRF CCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA