| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is fbp [H]
Identifier: 77456580
GI number: 77456580
Start: 402012
End: 403022
Strand: Direct
Name: fbp [H]
Synonym: Pfl01_0352
Alternate gene names: 77456580
Gene position: 402012-403022 (Clockwise)
Preceding gene: 77456579
Following gene: 77456581
Centisome position: 6.24
GC content: 59.94
Gene sequence:
>1011_bases ATGTCCCGCGTTACCCTGAGTCGCTATTTGATTGAGCAGACCCGCAGCAACAACACTCCTGCCGATCTGCGTTTCCTGAT CGAAGTGGTGGCGCGCGCCTGTAAAGAAATCAGCCACGCCGTGTCCAAAGGCGCCCTGGGCGGTGTTCTGGGCAGCATGG GCACGGAAAACGTGCAAGGCGAAGTGCAGAAGAAGCTCGACGTGCTGTCGAACGAAATCCTGCTCGAAGCCAACGAATGG GGCGGTCACCTGGCCGGCATGGCGTCCGAAGAAATGGACAACGCCTACCAGATCCCGGGCAAATACCCGAAAGGCGCCTA CCTGCTGGTATTCGACCCGCTGGACGGTTCGTCGAACATCGACATCAACGCGCCGGTCGGCACCATCTTCTCCGTGCTGC GTTGCCCGAACGAATACCTGAGCCAGAACGAAGCCCTGGATGAAAAGGCCTTCCTGCAGCCGGGCACTCAGCAAGTTGCC GCCGGTTATGCCATCTATGGCCCGCAGACCATGCTGGTGCTGACCCTGGGCCACGGCGTCAAAGGCTTCACCCTGGACCG CGAAATGGGCAGCTTCGTCCTGACCCACGAAGACATCACTATTCCTGAAAGCACCCAGGAATTCGCCATCAACATGTCCA ACCAGCGTCATTGGGAAGCTCCGGTACAGCGCTACGTTTCGGAACTGCTGGCCGGTGAAGAAGGCCCGCTGAAAAAGAAC TACAACATGCGTTGGGTCGCGGCGATGGTTGCCGATGTGCACCGCATCCTGACCCGTGGCGGTCTGTTCATGTACCCGCG CGACAGCCGCGAGCCGTCCAAACCGGGCAAACTGCGCCTGATGTACGAAGCCAACCCGATGTCGTTCCTGGTGGAACAGG CAGGCGGCGCTTCCACCGACGGTCACCAGCGCATTCTCGATATCAAGCCTGAAGGCCTGCACCAGCGCGTAGCGGTGTTC CTCGGCTCGAAAGAAGAAGTCGCCCGCGCCACGGCGTACCACAAGGAATAA
Upstream 100 bases:
>100_bases TTGCACCCGACGCACGTTACCGGGCGTCATTGCTCGCTACGGTTTCAGACTCCCTGTAAACTGCGCGGGTTTTTAGCCCC CCATTCCACCGGAGCCGTCC
Downstream 100 bases:
>100_bases ACCATGACCGCGCCCTGGCAGCCGTTGCTCGATTGGTGGTTCGGTCATGCCGAATCGGCTACTGAAGTGACGGCGCAACA GGGCGGGTTGTGGTTCGGCA
Product: fructose-1,6-bisphosphatase
Products: NA
Alternate protein names: FBPase class 1; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 [H]
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MSRVTLSRYLIEQTRSNNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQGEVQKKLDVLSNEILLEANEW GGHLAGMASEEMDNAYQIPGKYPKGAYLLVFDPLDGSSNIDINAPVGTIFSVLRCPNEYLSQNEALDEKAFLQPGTQQVA AGYAIYGPQTMLVLTLGHGVKGFTLDREMGSFVLTHEDITIPESTQEFAINMSNQRHWEAPVQRYVSELLAGEEGPLKKN YNMRWVAAMVADVHRILTRGGLFMYPRDSREPSKPGKLRLMYEANPMSFLVEQAGGASTDGHQRILDIKPEGLHQRVAVF LGSKEEVARATAYHKE
Sequences:
>Translated_336_residues MSRVTLSRYLIEQTRSNNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQGEVQKKLDVLSNEILLEANEW GGHLAGMASEEMDNAYQIPGKYPKGAYLLVFDPLDGSSNIDINAPVGTIFSVLRCPNEYLSQNEALDEKAFLQPGTQQVA AGYAIYGPQTMLVLTLGHGVKGFTLDREMGSFVLTHEDITIPESTQEFAINMSNQRHWEAPVQRYVSELLAGEEGPLKKN YNMRWVAAMVADVHRILTRGGLFMYPRDSREPSKPGKLRLMYEANPMSFLVEQAGGASTDGHQRILDIKPEGLHQRVAVF LGSKEEVARATAYHKE >Mature_335_residues SRVTLSRYLIEQTRSNNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQGEVQKKLDVLSNEILLEANEWG GHLAGMASEEMDNAYQIPGKYPKGAYLLVFDPLDGSSNIDINAPVGTIFSVLRCPNEYLSQNEALDEKAFLQPGTQQVAA GYAIYGPQTMLVLTLGHGVKGFTLDREMGSFVLTHEDITIPESTQEFAINMSNQRHWEAPVQRYVSELLAGEEGPLKKNY NMRWVAAMVADVHRILTRGGLFMYPRDSREPSKPGKLRLMYEANPMSFLVEQAGGASTDGHQRILDIKPEGLHQRVAVFL GSKEEVARATAYHKE
Specific function: INVOLVED IN SEVERAL METABOLIC PATHWAYS. IN E.COLI AND YEAST IT IS NECESSARY FOR GROWTH ON SUBSTANCES SUCH AS GLYCEROL, SUCCINATE AND ACETATE. [C]
COG id: COG0158
COG function: function code G; Fructose-1,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FBPase class 1 family [H]
Homologues:
Organism=Homo sapiens, GI22907028, Length=324, Percent_Identity=41.9753086419753, Blast_Score=242, Evalue=5e-64, Organism=Homo sapiens, GI189083692, Length=326, Percent_Identity=39.8773006134969, Blast_Score=226, Evalue=2e-59, Organism=Homo sapiens, GI16579888, Length=326, Percent_Identity=39.8773006134969, Blast_Score=226, Evalue=2e-59, Organism=Escherichia coli, GI1790679, Length=333, Percent_Identity=41.7417417417417, Blast_Score=256, Evalue=2e-69, Organism=Caenorhabditis elegans, GI17508131, Length=331, Percent_Identity=41.0876132930514, Blast_Score=244, Evalue=4e-65, Organism=Saccharomyces cerevisiae, GI6323409, Length=329, Percent_Identity=39.8176291793313, Blast_Score=240, Evalue=3e-64, Organism=Drosophila melanogaster, GI45550998, Length=334, Percent_Identity=43.4131736526946, Blast_Score=239, Evalue=2e-63, Organism=Drosophila melanogaster, GI19921562, Length=334, Percent_Identity=43.4131736526946, Blast_Score=239, Evalue=2e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000146 [H]
Pfam domain/function: PF00316 FBPase [H]
EC number: =3.1.3.11 [H]
Molecular weight: Translated: 37097; Mature: 36966
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRVTLSRYLIEQTRSNNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQG CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH EVQKKLDVLSNEILLEANEWGGHLAGMASEEMDNAYQIPGKYPKGAYLLVFDPLDGSSNI HHHHHHHHHCCCEEEEECCCCCHHCCCCHHHCCCEEECCCCCCCCEEEEEEECCCCCCCE DINAPVGTIFSVLRCPNEYLSQNEALDEKAFLQPGTQQVAAGYAIYGPQTMLVLTLGHGV EEECCHHHHHHHHHCCHHHHHCCCCCCHHHHCCCCHHHHHCCEEEECCCEEEEEEECCCC KGFTLDREMGSFVLTHEDITIPESTQEFAINMSNQRHWEAPVQRYVSELLAGEEGPLKKN CCEEECCCCCCEEEEECCCCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCC YNMRWVAAMVADVHRILTRGGLFMYPRDSREPSKPGKLRLMYEANPMSFLVEQAGGASTD CCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCC GHQRILDIKPEGLHQRVAVFLGSKEEVARATAYHKE CCCEEEECCCCCHHHHHHHHCCCHHHHHHHHHCCCC >Mature Secondary Structure SRVTLSRYLIEQTRSNNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQG CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH EVQKKLDVLSNEILLEANEWGGHLAGMASEEMDNAYQIPGKYPKGAYLLVFDPLDGSSNI HHHHHHHHHCCCEEEEECCCCCHHCCCCHHHCCCEEECCCCCCCCEEEEEEECCCCCCCE DINAPVGTIFSVLRCPNEYLSQNEALDEKAFLQPGTQQVAAGYAIYGPQTMLVLTLGHGV EEECCHHHHHHHHHCCHHHHHCCCCCCHHHHCCCCHHHHHCCEEEECCCEEEEEEECCCC KGFTLDREMGSFVLTHEDITIPESTQEFAINMSNQRHWEAPVQRYVSELLAGEEGPLKKN CCEEECCCCCCEEEEECCCCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCC YNMRWVAAMVADVHRILTRGGLFMYPRDSREPSKPGKLRLMYEANPMSFLVEQAGGASTD CCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCC GHQRILDIKPEGLHQRVAVFLGSKEEVARATAYHKE CCCEEEECCCCCHHHHHHHHCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA