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The map label for this gene is secB

Identifier: 77456564

GI number: 77456564

Start: 380911

End: 381396

Strand: Direct

Name: secB

Synonym: Pfl01_0336

Alternate gene names: 77456564

Gene position: 380911-381396 (Clockwise)

Preceding gene: 77456563

Following gene: 77456566

Centisome position: 5.92

GC content: 59.67

Gene sequence:

>486_bases
ATGACTGACCAACAGAACACTGCAGCCAGCGAAGAAGAAACCGCACCGCAATTCTCCTTGCAGCGCATCTACGTACGCGA
CCTGTCCTTCGAAGCCCCGAAAAGCCCGGCAATCTTCCGCCAGCAGTGGGATCCGGCGGTCGCTCTGGATCTGAACACCC
GCCAGAAAGCCCTGGAAGGTGATTTCTACGAAGTCGTGCTGACCCTGTCCGTCACCGTGAAAAACGGTGAAGAAGTGGCC
TTCATCGCTGAAGTGCAACAGGCCGGTATCTTCCTGATCAAGAACCTGGACGCGGCTTCCATGAGCCACACCCTGGGTGC
GTTCTGCCCGAACATCCTGTTCCCGTACGCTCGCGAAACCCTGGACAGCCTGGTGACCCGCGGTTCGTTCCCGGCCCTGA
TGCTGGCCCCGGTGAACTTCGACGCCCTGTACGCGCAAGAGCTGCAGCGCATGCAGGAATCCGGCGAGACCCCAACCGTT
CAGTAA

Upstream 100 bases:

>100_bases
CCTGGAGCGTGCCGGCAAGCTCGACGCGCTGCTCAAGGCCTGAACTGCTGCACCTGCAAACCAAGAACCCTAAAAGACCC
AAGATCAGAAAGGATCTGAG

Downstream 100 bases:

>100_bases
GCGGTCGATGCAACAACGAAAAAAGCGCCGTTACCGGCGCTTTTTTCTTGGGCGATCGAATGGCGTTACTTGAAGTCGTT
CTGCCGCCACGCTTCGTACA

Product: preprotein translocase subunit SecB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MTDQQNTAASEEETAPQFSLQRIYVRDLSFEAPKSPAIFRQQWDPAVALDLNTRQKALEGDFYEVVLTLSVTVKNGEEVA
FIAEVQQAGIFLIKNLDAASMSHTLGAFCPNILFPYARETLDSLVTRGSFPALMLAPVNFDALYAQELQRMQESGETPTV
Q

Sequences:

>Translated_161_residues
MTDQQNTAASEEETAPQFSLQRIYVRDLSFEAPKSPAIFRQQWDPAVALDLNTRQKALEGDFYEVVLTLSVTVKNGEEVA
FIAEVQQAGIFLIKNLDAASMSHTLGAFCPNILFPYARETLDSLVTRGSFPALMLAPVNFDALYAQELQRMQESGETPTV
Q
>Mature_160_residues
TDQQNTAASEEETAPQFSLQRIYVRDLSFEAPKSPAIFRQQWDPAVALDLNTRQKALEGDFYEVVLTLSVTVKNGEEVAF
IAEVQQAGIFLIKNLDAASMSHTLGAFCPNILFPYARETLDSLVTRGSFPALMLAPVNFDALYAQELQRMQESGETPTVQ

Specific function: One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its r

COG id: COG1952

COG function: function code U; Preprotein translocase subunit SecB

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secB family

Homologues:

Organism=Escherichia coli, GI1790038, Length=156, Percent_Identity=53.2051282051282, Blast_Score=175, Evalue=1e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SECB_PSEPF (Q3KJH6)

Other databases:

- EMBL:   CP000094
- RefSeq:   YP_346069.1
- ProteinModelPortal:   Q3KJH6
- SMR:   Q3KJH6
- STRING:   Q3KJH6
- GeneID:   3713364
- GenomeReviews:   CP000094_GR
- KEGG:   pfo:Pfl01_0336
- eggNOG:   COG1952
- HOGENOM:   HBG294212
- OMA:   GFPPLMI
- ProtClustDB:   PRK05751
- BioCyc:   PFLU205922:PFL_0336-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00821
- InterPro:   IPR003708
- Gene3D:   G3DSA:3.10.420.10
- PRINTS:   PR01594
- TIGRFAMs:   TIGR00809

Pfam domain/function: PF02556 SecB; SSF54611 SecB

EC number: NA

Molecular weight: Translated: 17892; Mature: 17761

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDQQNTAASEEETAPQFSLQRIYVRDLSFEAPKSPAIFRQQWDPAVALDLNTRQKALEG
CCCCCCCCCCCHHCCCHHHHHHHHEECCCCCCCCCCCHHHHCCCCEEEEECCCHHHHHCC
DFYEVVLTLSVTVKNGEEVAFIAEVQQAGIFLIKNLDAASMSHTLGAFCPNILFPYARET
CCEEEEEEEEEEECCCCEEEEEEHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
LDSLVTRGSFPALMLAPVNFDALYAQELQRMQESGETPTVQ
HHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TDQQNTAASEEETAPQFSLQRIYVRDLSFEAPKSPAIFRQQWDPAVALDLNTRQKALEG
CCCCCCCCCCHHCCCHHHHHHHHEECCCCCCCCCCCHHHHCCCCEEEEECCCHHHHHCC
DFYEVVLTLSVTVKNGEEVAFIAEVQQAGIFLIKNLDAASMSHTLGAFCPNILFPYARET
CCEEEEEEEEEEECCCCEEEEEEHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
LDSLVTRGSFPALMLAPVNFDALYAQELQRMQESGETPTVQ
HHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA