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The map label for this gene is yibP [H]

Identifier: 77456560

GI number: 77456560

Start: 377064

End: 378368

Strand: Reverse

Name: yibP [H]

Synonym: Pfl01_0332

Alternate gene names: 77456560

Gene position: 378368-377064 (Counterclockwise)

Preceding gene: 77456561

Following gene: 77456559

Centisome position: 5.88

GC content: 60.84

Gene sequence:

>1305_bases
ATGCTTCGCGTCCTGATCGCCCTCGCTCTGACATGCCTGCTCCAACCGGCCTTCGCGGATGAGCGCGCGCAAACCCAACA
GCAACTGGACGCCACGCGCCAGGACATCGCCGAGCTGAAAAAACTGCTGGGCAAGCTCCAGGAAGAAAAATCCGGCGTGC
AAAAGGAGCTCAAGGGCACCGAAACCGAGATGGGCAAGCTCGAGAAACAGGTCGAAGCCCTGCAGAAAGAGCTGAAGAAG
AGCGAATCCGAGCTGCAGCGGCTCGATGCGGAGAAAAAAAAACTCCAGAGCGCGCGCACTGAACAGCAGCGACTGATCGC
CATCCAGGCCCGCGCCGCCTACCAGAACGGTCGCCAGGAATACCTCAAGCTGCTGCTCAACCAGCAGAATCCCGAGAAAT
TCGCCCGCACCCTCACCTATTACGACTACCTGAGCCAGGCTCGCCTGGAACAGCTGAAAAGCTTCAACGAAACCCTGCGC
CAACTGGCCAATGTCGAAAAGGACATCGGCTTGCAGCAGGCGCAATTGCTGGTGCAGCAAAGCGATCTCGACACTCAGCG
CGAAGCGCTCGACAAGGTCCGCAAGGAGCGCCAGCAGGCCCTTGCCAAACTCAATGACGACGTGAAAGCCCGGGACCAGA
AACTGGCCGCCCGCGAGCAGGACCAGGCAGACCTGTCTAAAGTCCTTAAAACCATTGAAGAAACCCTGGCCCGCCAGGCC
CGTGAGGCAGAAGAAGCGCGACAGAAAGCGCTCATCGCCCAGCAGGAAGCCGAAAAAAAGCGTTTGCGTGAGGCCCAGGC
CCGTGCCGATGCGGACTCGGACACCAGCGACGCCCCGCGAAAACAAGCCAGACCCACACCTGGCGCGCTGGTTTCCAGCA
GCGGCGAGACGTTCGGCGGCCCTTTTGCTGCCACCCGGGGAAAACTTCCATGGCCGGTTGATGGTCGACTGCTGGCACGC
TTTGGCGAAACCCGTGGCGACGATGCCCGCACCAAGTGGGATGGCGTGATGATCAGCGCCTCCGCCGGCAGCCAGGTGCA
CGCCGTACATGGCGGGCGCGTGGTGTTTGCCGACTGGTTGCGCGGTGCCGGGCTATTGGTGATCCTCGATCACGGCAACG
GTTTTCTGAGTCTTTACGGTCACAACCAGACGCTGCTCAAGTCGGCGGGTGACGTGGTAAAAGCCGGTGAGTCCATCTCC
ACTGTGGGTAACAGTGGCGGCCAGGACACACCAGCGCTGTATTTCGCAATTCGTCAGCAGGGTCACCCGAGTGATCCGGC
GCAATGGTGCCGTGCGCAAGGATAA

Upstream 100 bases:

>100_bases
TTTATGACGAACGCCTCAAAGCAGTTGGCTTTGAGGCGTTTTTTTTGCTGCGTCGGGCGGGCATACTAGGCCGTCCCTTA
CCCTGGTGCCGCCCGCCTCT

Downstream 100 bases:

>100_bases
GCACGCCATCTAATTCAGGAGTTCGTTCGACATGCTGCATTTGTCCCGCCTTACCTCGCTGGCCCTGACGATCGCCCTGG
TGATCGGCGCGCCTCTGGCG

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MLRVLIALALTCLLQPAFADERAQTQQQLDATRQDIAELKKLLGKLQEEKSGVQKELKGTETEMGKLEKQVEALQKELKK
SESELQRLDAEKKKLQSARTEQQRLIAIQARAAYQNGRQEYLKLLLNQQNPEKFARTLTYYDYLSQARLEQLKSFNETLR
QLANVEKDIGLQQAQLLVQQSDLDTQREALDKVRKERQQALAKLNDDVKARDQKLAAREQDQADLSKVLKTIEETLARQA
REAEEARQKALIAQQEAEKKRLREAQARADADSDTSDAPRKQARPTPGALVSSSGETFGGPFAATRGKLPWPVDGRLLAR
FGETRGDDARTKWDGVMISASAGSQVHAVHGGRVVFADWLRGAGLLVILDHGNGFLSLYGHNQTLLKSAGDVVKAGESIS
TVGNSGGQDTPALYFAIRQQGHPSDPAQWCRAQG

Sequences:

>Translated_434_residues
MLRVLIALALTCLLQPAFADERAQTQQQLDATRQDIAELKKLLGKLQEEKSGVQKELKGTETEMGKLEKQVEALQKELKK
SESELQRLDAEKKKLQSARTEQQRLIAIQARAAYQNGRQEYLKLLLNQQNPEKFARTLTYYDYLSQARLEQLKSFNETLR
QLANVEKDIGLQQAQLLVQQSDLDTQREALDKVRKERQQALAKLNDDVKARDQKLAAREQDQADLSKVLKTIEETLARQA
REAEEARQKALIAQQEAEKKRLREAQARADADSDTSDAPRKQARPTPGALVSSSGETFGGPFAATRGKLPWPVDGRLLAR
FGETRGDDARTKWDGVMISASAGSQVHAVHGGRVVFADWLRGAGLLVILDHGNGFLSLYGHNQTLLKSAGDVVKAGESIS
TVGNSGGQDTPALYFAIRQQGHPSDPAQWCRAQG
>Mature_434_residues
MLRVLIALALTCLLQPAFADERAQTQQQLDATRQDIAELKKLLGKLQEEKSGVQKELKGTETEMGKLEKQVEALQKELKK
SESELQRLDAEKKKLQSARTEQQRLIAIQARAAYQNGRQEYLKLLLNQQNPEKFARTLTYYDYLSQARLEQLKSFNETLR
QLANVEKDIGLQQAQLLVQQSDLDTQREALDKVRKERQQALAKLNDDVKARDQKLAAREQDQADLSKVLKTIEETLARQA
REAEEARQKALIAQQEAEKKRLREAQARADADSDTSDAPRKQARPTPGALVSSSGETFGGPFAATRGKLPWPVDGRLLAR
FGETRGDDARTKWDGVMISASAGSQVHAVHGGRVVFADWLRGAGLLVILDHGNGFLSLYGHNQTLLKSAGDVVKAGESIS
TVGNSGGQDTPALYFAIRQQGHPSDPAQWCRAQG

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=434, Percent_Identity=31.3364055299539, Blast_Score=187, Evalue=1e-48,
Organism=Escherichia coli, GI1789099, Length=120, Percent_Identity=37.5, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI87082174, Length=230, Percent_Identity=27.8260869565217, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 48198; Mature: 48198

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRVLIALALTCLLQPAFADERAQTQQQLDATRQDIAELKKLLGKLQEEKSGVQKELKGT
CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ETEMGKLEKQVEALQKELKKSESELQRLDAEKKKLQSARTEQQRLIAIQARAAYQNGRQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
YLKLLLNQQNPEKFARTLTYYDYLSQARLEQLKSFNETLRQLANVEKDIGLQQAQLLVQQ
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SDLDTQREALDKVRKERQQALAKLNDDVKARDQKLAAREQDQADLSKVLKTIEETLARQA
HCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
REAEEARQKALIAQQEAEKKRLREAQARADADSDTSDAPRKQARPTPGALVSSSGETFGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCC
PFAATRGKLPWPVDGRLLARFGETRGDDARTKWDGVMISASAGSQVHAVHGGRVVFADWL
CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEEECCCEEEEHHHH
RGAGLLVILDHGNGFLSLYGHNQTLLKSAGDVVKAGESISTVGNSGGQDTPALYFAIRQQ
HCCCEEEEEECCCCEEEEECCCHHHHHHCCHHHHCCCHHHHHCCCCCCCCHHHHHHHHHC
GHPSDPAQWCRAQG
CCCCCHHHHHHCCC
>Mature Secondary Structure
MLRVLIALALTCLLQPAFADERAQTQQQLDATRQDIAELKKLLGKLQEEKSGVQKELKGT
CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ETEMGKLEKQVEALQKELKKSESELQRLDAEKKKLQSARTEQQRLIAIQARAAYQNGRQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
YLKLLLNQQNPEKFARTLTYYDYLSQARLEQLKSFNETLRQLANVEKDIGLQQAQLLVQQ
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SDLDTQREALDKVRKERQQALAKLNDDVKARDQKLAAREQDQADLSKVLKTIEETLARQA
HCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
REAEEARQKALIAQQEAEKKRLREAQARADADSDTSDAPRKQARPTPGALVSSSGETFGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCC
PFAATRGKLPWPVDGRLLARFGETRGDDARTKWDGVMISASAGSQVHAVHGGRVVFADWL
CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEEECCCEEEEHHHH
RGAGLLVILDHGNGFLSLYGHNQTLLKSAGDVVKAGESISTVGNSGGQDTPALYFAIRQQ
HCCCEEEEEECCCCEEEEECCCHHHHHHCCHHHHCCCHHHHHCCCCCCCCHHHHHHHHHC
GHPSDPAQWCRAQG
CCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]