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The map label for this gene is ctpA [H]

Identifier: 77456559

GI number: 77456559

Start: 375713

End: 377032

Strand: Reverse

Name: ctpA [H]

Synonym: Pfl01_0331

Alternate gene names: 77456559

Gene position: 377032-375713 (Counterclockwise)

Preceding gene: 77456560

Following gene: 77456558

Centisome position: 5.86

GC content: 64.24

Gene sequence:

>1320_bases
ATGCTGCATTTGTCCCGCCTTACCTCGCTGGCCCTGACGATCGCCCTGGTGATCGGCGCGCCTCTGGCGTTTGCCGCTCA
ACCGGCTCCGGCCGTCGCTCCGGCAGGTACTGCCGCGACTTCCAAGGCGCCGTTGCCGCTGGAAGAGCTGCGCACCTTTG
CCGAGGTCATGGACCGGATCAAGGCCGCCTATGTCGAGCCGGTGGACGACAAGACCCTGCTGGAAAACGCGATCAAGGGC
ATGCTCAGCAACCTTGATCCGCACTCCGCCTACCTGGGCCCTGAAGACTTTGCCGAGTTGCAGGAAAGCACCAGCGGTGA
ATTCGGTGGCCTGGGCATCGAAGTCGGCGCCGAGGACGGCTTCATCAAGGTCGTGTCGCCGATCGATGACACTCCGGCGT
CGAAGGCCGGCATCCAGGCCGGCGACTTCATCGTCAAGATCAACGGCGCGCCGACCCGCGGCCAGACCATGACCGAAGCC
GTGGACAAGATGCGCGGCAAGATCGGCCAGAAGATTACCCTGACCCTGGTGCGCGACGGCGGCACGCCGTTCGATGTAAC
CCTGGCTCGCGCCGTGATCCAGGTGAAGAGCGTCAAGGCGCAACTGCTGGAGTCGGGCTACGGCCTGATCCGCATCACTC
AGTTCCAGGTCAAGACCGGCGAAGAGGTCTCCAAGGCCCTGGCCAAGCTGCGCAAGGACAATGGCAAGAAGCTCAACGGC
ATCATCCTCGACCTGCGCAACAACCCGGGTGGCGTGCTGCAGGCGGCGGTGGAAGTGGTCGACCACTTCATCACCAAAGG
CCTGATCGTCTACACCAAGGGCCGGATCGCCAACTCCGAGCTGCGCTTCTCCGCCACCGGCAAGGACGAAAGCGAAGCCG
TGCCGATGGTCGTGCTGATCAACGGTGGCAGTGCCTCGGCCTCGGAAATCGTCGCCGGCGCCCTGCAGGATCAGAAACGC
GCCGTGGTCATGGGCACCACCAGTTTCGGCAAGGGCTCGGTACAGACCGTGCTGCCGCTGAACAACGACCGCGCGCTGAA
GATCACCACGGCGCTGTACTTCACGCCGAACGGCCGCTCGATCCAGGCCCAGGGCATCGTCCCGGACATCGAAGTGCGCC
GCGCCAAGATCACCAACGAGGCGGACAGCGACTACTTCAAGGAAGCCGATCTGCAAGGTCACCTGGGCAACGGCAACGGC
GGCGCGGACAAACCGACCGGCTCTGGCGGCAAAGCCAAGGCGATGCCGCAGGATGACGATTACCAGTTGGCCCAGGCCCT
GAGCCTGCTCAAAGGCCTGAGCATCACGTCCGGCCGTTGA

Upstream 100 bases:

>100_bases
CTGTATTTCGCAATTCGTCAGCAGGGTCACCCGAGTGATCCGGCGCAATGGTGCCGTGCGCAAGGATAAGCACGCCATCT
AATTCAGGAGTTCGTTCGAC

Downstream 100 bases:

>100_bases
GGATGTCCTTGCGTTTGGTCTTTGTCCTGCTGTGCTGTCTGGCGGGTGCTGCTCATGCAGAACCTGCCAGACCCACACCT
CAAAAAGCCTACCTGACACT

Product: peptidase S41A, protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MLHLSRLTSLALTIALVIGAPLAFAAQPAPAVAPAGTAATSKAPLPLEELRTFAEVMDRIKAAYVEPVDDKTLLENAIKG
MLSNLDPHSAYLGPEDFAELQESTSGEFGGLGIEVGAEDGFIKVVSPIDDTPASKAGIQAGDFIVKINGAPTRGQTMTEA
VDKMRGKIGQKITLTLVRDGGTPFDVTLARAVIQVKSVKAQLLESGYGLIRITQFQVKTGEEVSKALAKLRKDNGKKLNG
IILDLRNNPGGVLQAAVEVVDHFITKGLIVYTKGRIANSELRFSATGKDESEAVPMVVLINGGSASASEIVAGALQDQKR
AVVMGTTSFGKGSVQTVLPLNNDRALKITTALYFTPNGRSIQAQGIVPDIEVRRAKITNEADSDYFKEADLQGHLGNGNG
GADKPTGSGGKAKAMPQDDDYQLAQALSLLKGLSITSGR

Sequences:

>Translated_439_residues
MLHLSRLTSLALTIALVIGAPLAFAAQPAPAVAPAGTAATSKAPLPLEELRTFAEVMDRIKAAYVEPVDDKTLLENAIKG
MLSNLDPHSAYLGPEDFAELQESTSGEFGGLGIEVGAEDGFIKVVSPIDDTPASKAGIQAGDFIVKINGAPTRGQTMTEA
VDKMRGKIGQKITLTLVRDGGTPFDVTLARAVIQVKSVKAQLLESGYGLIRITQFQVKTGEEVSKALAKLRKDNGKKLNG
IILDLRNNPGGVLQAAVEVVDHFITKGLIVYTKGRIANSELRFSATGKDESEAVPMVVLINGGSASASEIVAGALQDQKR
AVVMGTTSFGKGSVQTVLPLNNDRALKITTALYFTPNGRSIQAQGIVPDIEVRRAKITNEADSDYFKEADLQGHLGNGNG
GADKPTGSGGKAKAMPQDDDYQLAQALSLLKGLSITSGR
>Mature_439_residues
MLHLSRLTSLALTIALVIGAPLAFAAQPAPAVAPAGTAATSKAPLPLEELRTFAEVMDRIKAAYVEPVDDKTLLENAIKG
MLSNLDPHSAYLGPEDFAELQESTSGEFGGLGIEVGAEDGFIKVVSPIDDTPASKAGIQAGDFIVKINGAPTRGQTMTEA
VDKMRGKIGQKITLTLVRDGGTPFDVTLARAVIQVKSVKAQLLESGYGLIRITQFQVKTGEEVSKALAKLRKDNGKKLNG
IILDLRNNPGGVLQAAVEVVDHFITKGLIVYTKGRIANSELRFSATGKDESEAVPMVVLINGGSASASEIVAGALQDQKR
AVVMGTTSFGKGSVQTVLPLNNDRALKITTALYFTPNGRSIQAQGIVPDIEVRRAKITNEADSDYFKEADLQGHLGNGNG
GADKPTGSGGKAKAMPQDDDYQLAQALSLLKGLSITSGR

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=320, Percent_Identity=33.4375, Blast_Score=115, Evalue=4e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 46144; Mature: 46144

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHLSRLTSLALTIALVIGAPLAFAAQPAPAVAPAGTAATSKAPLPLEELRTFAEVMDRI
CCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
KAAYVEPVDDKTLLENAIKGMLSNLDPHSAYLGPEDFAELQESTSGEFGGLGIEVGAEDG
HHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCC
FIKVVSPIDDTPASKAGIQAGDFIVKINGAPTRGQTMTEAVDKMRGKIGQKITLTLVRDG
EEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECC
GTPFDVTLARAVIQVKSVKAQLLESGYGLIRITQFQVKTGEEVSKALAKLRKDNGKKLNG
CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCCEEEE
IILDLRNNPGGVLQAAVEVVDHFITKGLIVYTKGRIANSELRFSATGKDESEAVPMVVLI
EEEEEECCCCHHHHHHHHHHHHHHHCCEEEEECCCEECCEEEEEECCCCCCCCCCEEEEE
NGGSASASEIVAGALQDQKRAVVMGTTSFGKGSVQTVLPLNNDRALKITTALYFTPNGRS
ECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCE
IQAQGIVPDIEVRRAKITNEADSDYFKEADLQGHLGNGNGGADKPTGSGGKAKAMPQDDD
EEECCCCCCCHHHHEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
YQLAQALSLLKGLSITSGR
HHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLHLSRLTSLALTIALVIGAPLAFAAQPAPAVAPAGTAATSKAPLPLEELRTFAEVMDRI
CCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
KAAYVEPVDDKTLLENAIKGMLSNLDPHSAYLGPEDFAELQESTSGEFGGLGIEVGAEDG
HHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCC
FIKVVSPIDDTPASKAGIQAGDFIVKINGAPTRGQTMTEAVDKMRGKIGQKITLTLVRDG
EEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECC
GTPFDVTLARAVIQVKSVKAQLLESGYGLIRITQFQVKTGEEVSKALAKLRKDNGKKLNG
CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCCEEEE
IILDLRNNPGGVLQAAVEVVDHFITKGLIVYTKGRIANSELRFSATGKDESEAVPMVVLI
EEEEEECCCCHHHHHHHHHHHHHHHCCEEEEECCCEECCEEEEEECCCCCCCCCCEEEEE
NGGSASASEIVAGALQDQKRAVVMGTTSFGKGSVQTVLPLNNDRALKITTALYFTPNGRS
ECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCE
IQAQGIVPDIEVRRAKITNEADSDYFKEADLQGHLGNGNGGADKPTGSGGKAKAMPQDDD
EEECCCCCCCHHHHEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
YQLAQALSLLKGLSITSGR
HHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]