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The map label for this gene is yibQ [H]

Identifier: 77456558

GI number: 77456558

Start: 374934

End: 375710

Strand: Reverse

Name: yibQ [H]

Synonym: Pfl01_0330

Alternate gene names: 77456558

Gene position: 375710-374934 (Counterclockwise)

Preceding gene: 77456559

Following gene: 77456557

Centisome position: 5.84

GC content: 61.78

Gene sequence:

>777_bases
ATGTCCTTGCGTTTGGTCTTTGTCCTGCTGTGCTGTCTGGCGGGTGCTGCTCATGCAGAACCTGCCAGACCCACACCTCA
AAAAGCCTACCTGACACTGATCATCGACGACCTGGGGCAGAACCTGCCCCGGGATCGCCGGGTGCTGGCCCTGCCCGGGC
CGGTCACGACCGCGATCATGCCCGACACCCCGCACGCCACCGAGTTTGCCCGCGAGGCCCATCGCGCCGGCAAGGTCGTG
ATCCTGCACATGCCGATGGACCCGGCCACTGGCCCGTTCGCCTGGCATCCCGAACTGCCCATCGAAGAACTCGAGAAACG
GCTGAACGCCGCGTTCAAAATGGTCCCCTACACCGCCGGCATCAACAACCATATGGGCAGTCGCATGACTGCGCAGCCGG
TGGCCATGGCGTGGTTGATGGGCGAGTTGCAGCGCCGCCACAAGTTCTTCGTCGACAGCCGGACCAGCGCCCAGACTGTC
GCCGCGCAACAGGCACAGAAGATCGATCTGGCAAGTGTTTCGCGGGATGTATTTCTCGATGACGAGCGCACCGAAGCGGC
GATCCTGACTCAATTGCAGACGGCAATCAGCCTGGCGCACAAGCAGGGTTCAGCCGTGATGATCGGACACCCTTATCCAC
AGACACTGGCGGTGCTGGAGCGGGAACTGCCAAAGTTGAAAGCCCAAGGCATCGAGTGGATCGACATCAAGCAGATGATC
AGCGTGCGCAGCAATCGCGCCACGGCCGCACACGGCAAAAACGGTGTCTACCGATAA

Upstream 100 bases:

>100_bases
CTGGCGGCAAAGCCAAGGCGATGCCGCAGGATGACGATTACCAGTTGGCCCAGGCCCTGAGCCTGCTCAAAGGCCTGAGC
ATCACGTCCGGCCGTTGAGG

Downstream 100 bases:

>100_bases
ATGCCCTGATACAACCGCTACACATAGTTATTGCCTGACGACTCGCCCGCGTCTGGATAGTCACCCCTGTAATGGTTAGC
GACTCTTGTGGGTCGCCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MSLRLVFVLLCCLAGAAHAEPARPTPQKAYLTLIIDDLGQNLPRDRRVLALPGPVTTAIMPDTPHATEFAREAHRAGKVV
ILHMPMDPATGPFAWHPELPIEELEKRLNAAFKMVPYTAGINNHMGSRMTAQPVAMAWLMGELQRRHKFFVDSRTSAQTV
AAQQAQKIDLASVSRDVFLDDERTEAAILTQLQTAISLAHKQGSAVMIGHPYPQTLAVLERELPKLKAQGIEWIDIKQMI
SVRSNRATAAHGKNGVYR

Sequences:

>Translated_258_residues
MSLRLVFVLLCCLAGAAHAEPARPTPQKAYLTLIIDDLGQNLPRDRRVLALPGPVTTAIMPDTPHATEFAREAHRAGKVV
ILHMPMDPATGPFAWHPELPIEELEKRLNAAFKMVPYTAGINNHMGSRMTAQPVAMAWLMGELQRRHKFFVDSRTSAQTV
AAQQAQKIDLASVSRDVFLDDERTEAAILTQLQTAISLAHKQGSAVMIGHPYPQTLAVLERELPKLKAQGIEWIDIKQMI
SVRSNRATAAHGKNGVYR
>Mature_257_residues
SLRLVFVLLCCLAGAAHAEPARPTPQKAYLTLIIDDLGQNLPRDRRVLALPGPVTTAIMPDTPHATEFAREAHRAGKVVI
LHMPMDPATGPFAWHPELPIEELEKRLNAAFKMVPYTAGINNHMGSRMTAQPVAMAWLMGELQRRHKFFVDSRTSAQTVA
AQQAQKIDLASVSRDVFLDDERTEAAILTQLQTAISLAHKQGSAVMIGHPYPQTLAVLERELPKLKAQGIEWIDIKQMIS
VRSNRATAAHGKNGVYR

Specific function: Unknown

COG id: COG2861

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0755 [H]

Homologues:

Organism=Escherichia coli, GI87082298, Length=195, Percent_Identity=41.025641025641, Blast_Score=160, Evalue=7e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006837
- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF04748 Polysacc_deac_2 [H]

EC number: NA

Molecular weight: Translated: 28504; Mature: 28372

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRLVFVLLCCLAGAAHAEPARPTPQKAYLTLIIDDLGQNLPRDRRVLALPGPVTTAIM
CCHHHHHHHHHHHCCCCCCCCCCCCCCHHEEEEEEHHHCCCCCCCCEEEEECCCCEEEEC
PDTPHATEFAREAHRAGKVVILHMPMDPATGPFAWHPELPIEELEKRLNAAFKMVPYTAG
CCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEECC
INNHMGSRMTAQPVAMAWLMGELQRRHKFFVDSRTSAQTVAAQQAQKIDLASVSRDVFLD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEC
DERTEAAILTQLQTAISLAHKQGSAVMIGHPYPQTLAVLERELPKLKAQGIEWIDIKQMI
CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCEEHHHHHH
SVRSNRATAAHGKNGVYR
HHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SLRLVFVLLCCLAGAAHAEPARPTPQKAYLTLIIDDLGQNLPRDRRVLALPGPVTTAIM
CHHHHHHHHHHHCCCCCCCCCCCCCCHHEEEEEEHHHCCCCCCCCEEEEECCCCEEEEC
PDTPHATEFAREAHRAGKVVILHMPMDPATGPFAWHPELPIEELEKRLNAAFKMVPYTAG
CCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEECC
INNHMGSRMTAQPVAMAWLMGELQRRHKFFVDSRTSAQTVAAQQAQKIDLASVSRDVFLD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEC
DERTEAAILTQLQTAISLAHKQGSAVMIGHPYPQTLAVLERELPKLKAQGIEWIDIKQMI
CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCEEHHHHHH
SVRSNRATAAHGKNGVYR
HHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]