| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456536
Identifier: 77456536
GI number: 77456536
Start: 354343
End: 355548
Strand: Reverse
Name: 77456536
Synonym: Pfl01_0308
Alternate gene names: NA
Gene position: 355548-354343 (Counterclockwise)
Preceding gene: 77456537
Following gene: 77456535
Centisome position: 5.52
GC content: 60.86
Gene sequence:
>1206_bases GTGCTAACGGGCGAGGCCCTACTCGCCCGTTTCACGGCACTGGATACATTTCTCACAGCGCATCAGGCGCTGTGGAAACC CCGCCCGTTCACTCATCTGCACCTGCCCTGGGAAGCGTCTTACCCGGAACTGGCCTCGTGGCTACGCGGGCGGTCGCTGG AAGATGCAGAAAACGCCCACAACCAACCCGCCGAACTCTTGAATGCGCCGGAGCCGTTTGGTTCGTTGGCGGCGTTGTCG CTTGAACTGAGTGCGGTGGGTGAACTGCCTACACATTCGCTGGAAGCCGCCGGGCATCGTCTGAATGTCGATGTGCCCGG GCGCAAATGGCAGCAGATCGAAGCCTTCGCCAGCCGCTTGTCGTTTGCCGCGCAACCGAGACACTGGCTGGATTGGTGTT CGGGCAAAGGTCATTTGGGTCGGCGTCTGCTCGGTGCCGATCAGCAACTCACCTGTCTGGAATACGACCCGGCGCTGGTT TCCAGCGGTCAGGCACTGAGTCAGCGTCATCACTTGCATGCGCTGCATGTCGAGCAGGATGTGCTCGCAGCGGACACGGC TTTATTGCTGAACACCGAACACACCCCTGTCGCCCTGCACGCTTGCGGTGATTTGCATGTGCGGCTGATGCAACTGGCCT CCGCCGCTGGCTGCCGACAACTGGCAATTGCACCGTGCTGTTACAACCGGATCAGTCGCACCGAATATCAGGCGTTGTCC TCCGCAGGTTCACGCTCCGTCCTACAGCTCTCGCTGGAAGATCTGTCCCTGCCGATGAGCGAAACGGTCACCGCCGGTGC CCGCGTCCGACGTCAGCGTGACACCTCCATGGCCCGCCGACTGGCTTTCGATCTGTTGCAACGGCAAGTGCGTGGCGTCG ACGAATACTTGCCGGTACCGTCCCTGCCGAGCGTCTGGCTGGACAAACCGTTCGCCGATTACTGCCACGATCTGGCAGCG TTGAAAGAGTTATCCACAGTTGGCGCGCCAGATTGGGTAGCACTGGAAGCCGCCGGTTGGCAGCGATTGGCCGAAGTTCG CAACCTGGAATTGCTGCGCGGACTGTTCCGACGGCCGCTGGAGCTTTGGCTGAATCTTGACCGAGCTCTTTTCCTCACCG AACAGGGATACATCGTACGTCTAGGCACCTTCTGCGAGGCACCGCTCACACCGCGCAATTTCCTGCTGCTGGCCGAACGC GCTTAA
Upstream 100 bases:
>100_bases GTGTTCTATCTGGTGATGGCTTACGTGCTGGTTCGCGGCTTCAAACTGCTGGAACGCTGGCTGCGCGTCGATGCGTGCCA GGGACGCTGATACTTCTGAC
Downstream 100 bases:
>100_bases TCTTTCGCAGCCTGTGGATAACTCTGTTGATGGATTTATCGTGGATCCAATATCCACGGCTATTTCAGGCCACTAACAGC GCTGGTCATTTTTTGTTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MLTGEALLARFTALDTFLTAHQALWKPRPFTHLHLPWEASYPELASWLRGRSLEDAENAHNQPAELLNAPEPFGSLAALS LELSAVGELPTHSLEAAGHRLNVDVPGRKWQQIEAFASRLSFAAQPRHWLDWCSGKGHLGRRLLGADQQLTCLEYDPALV SSGQALSQRHHLHALHVEQDVLAADTALLLNTEHTPVALHACGDLHVRLMQLASAAGCRQLAIAPCCYNRISRTEYQALS SAGSRSVLQLSLEDLSLPMSETVTAGARVRRQRDTSMARRLAFDLLQRQVRGVDEYLPVPSLPSVWLDKPFADYCHDLAA LKELSTVGAPDWVALEAAGWQRLAEVRNLELLRGLFRRPLELWLNLDRALFLTEQGYIVRLGTFCEAPLTPRNFLLLAER A
Sequences:
>Translated_401_residues MLTGEALLARFTALDTFLTAHQALWKPRPFTHLHLPWEASYPELASWLRGRSLEDAENAHNQPAELLNAPEPFGSLAALS LELSAVGELPTHSLEAAGHRLNVDVPGRKWQQIEAFASRLSFAAQPRHWLDWCSGKGHLGRRLLGADQQLTCLEYDPALV SSGQALSQRHHLHALHVEQDVLAADTALLLNTEHTPVALHACGDLHVRLMQLASAAGCRQLAIAPCCYNRISRTEYQALS SAGSRSVLQLSLEDLSLPMSETVTAGARVRRQRDTSMARRLAFDLLQRQVRGVDEYLPVPSLPSVWLDKPFADYCHDLAA LKELSTVGAPDWVALEAAGWQRLAEVRNLELLRGLFRRPLELWLNLDRALFLTEQGYIVRLGTFCEAPLTPRNFLLLAER A >Mature_401_residues MLTGEALLARFTALDTFLTAHQALWKPRPFTHLHLPWEASYPELASWLRGRSLEDAENAHNQPAELLNAPEPFGSLAALS LELSAVGELPTHSLEAAGHRLNVDVPGRKWQQIEAFASRLSFAAQPRHWLDWCSGKGHLGRRLLGADQQLTCLEYDPALV SSGQALSQRHHLHALHVEQDVLAADTALLLNTEHTPVALHACGDLHVRLMQLASAAGCRQLAIAPCCYNRISRTEYQALS SAGSRSVLQLSLEDLSLPMSETVTAGARVRRQRDTSMARRLAFDLLQRQVRGVDEYLPVPSLPSVWLDKPFADYCHDLAA LKELSTVGAPDWVALEAAGWQRLAEVRNLELLRGLFRRPLELWLNLDRALFLTEQGYIVRLGTFCEAPLTPRNFLLLAER A
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44616; Mature: 44616
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTGEALLARFTALDTFLTAHQALWKPRPFTHLHLPWEASYPELASWLRGRSLEDAENAH CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHCCCCCCHHHHCC NQPAELLNAPEPFGSLAALSLELSAVGELPTHSLEAAGHRLNVDVPGRKWQQIEAFASRL CCCHHHCCCCCCCCCHHHHEEEHHHHCCCCCHHHHHCCCEEEECCCCHHHHHHHHHHHHH SFAAQPRHWLDWCSGKGHLGRRLLGADQQLTCLEYDPALVSSGQALSQRHHLHALHVEQD HHHCCCCHHHHHCCCCCCHHHHHHCCCCCEEEEECCCHHHCCCHHHHHHHHHEEEEHHHH VLAADTALLLNTEHTPVALHACGDLHVRLMQLASAAGCRQLAIAPCCYNRISRTEYQALS HHHHCCEEEEECCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH SAGSRSVLQLSLEDLSLPMSETVTAGARVRRQRDTSMARRLAFDLLQRQVRGVDEYLPVP CCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCC SLPSVWLDKPFADYCHDLAALKELSTVGAPDWVALEAAGWQRLAEVRNLELLRGLFRRPL CCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH ELWLNLDRALFLTEQGYIVRLGTFCEAPLTPRNFLLLAERA HHHHCCCCEEEEECCCCEEEECCCCCCCCCCCCEEEEEECC >Mature Secondary Structure MLTGEALLARFTALDTFLTAHQALWKPRPFTHLHLPWEASYPELASWLRGRSLEDAENAH CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHCCCCCCHHHHCC NQPAELLNAPEPFGSLAALSLELSAVGELPTHSLEAAGHRLNVDVPGRKWQQIEAFASRL CCCHHHCCCCCCCCCHHHHEEEHHHHCCCCCHHHHHCCCEEEECCCCHHHHHHHHHHHHH SFAAQPRHWLDWCSGKGHLGRRLLGADQQLTCLEYDPALVSSGQALSQRHHLHALHVEQD HHHCCCCHHHHHCCCCCCHHHHHHCCCCCEEEEECCCHHHCCCHHHHHHHHHEEEEHHHH VLAADTALLLNTEHTPVALHACGDLHVRLMQLASAAGCRQLAIAPCCYNRISRTEYQALS HHHHCCEEEEECCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH SAGSRSVLQLSLEDLSLPMSETVTAGARVRRQRDTSMARRLAFDLLQRQVRGVDEYLPVP CCCCCCEEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCC SLPSVWLDKPFADYCHDLAALKELSTVGAPDWVALEAAGWQRLAEVRNLELLRGLFRRPL CCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH ELWLNLDRALFLTEQGYIVRLGTFCEAPLTPRNFLLLAERA HHHHCCCCEEEEECCCCEEEECCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA