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The map label for this gene is occM [H]

Identifier: 77456537

GI number: 77456537

Start: 355559

End: 356248

Strand: Reverse

Name: occM [H]

Synonym: Pfl01_0309

Alternate gene names: 77456537

Gene position: 356248-355559 (Counterclockwise)

Preceding gene: 77456538

Following gene: 77456536

Centisome position: 5.53

GC content: 63.19

Gene sequence:

>690_bases
ATGAATTGGGAAGTCATCATCAAGTGGCTGCCGAAACTGGCCCAGGGCGCAACGCTGACCCTGGAACTGGTGGCCATCGC
CGTGATCGCCGGTTTGCTGCTGGCAATTCCGCTGGGCATCGCCCGCTCTTCGAAGCTGTGGTACGTGCGCGCTTTGCCCT
ACGCCTATATCTTCTTTTTCCGTGGCACGCCGTTGCTGGTTCAACTGTTCCTGGTCTACTACGGCCTGGCGCAGTTCGAT
GCGGTGCGTAACAGTTCGATGTGGCCGTACCTGCGCGATCCGTTCTGGTGCGCCACCGCGACCATGACCCTGCACACCGC
GGCGTACATCGCCGAGATCCTGCGCGGGGCGATCCAGGCGATTCCGCCGGGCGAGATCGAAGCGGCGCGGGCGCTGGGCA
TGTCCCGACCGAAAGCGCTGTTCTACATCATCCTGCCGCGTGCCGCGCGTATCGGCCTGCCGGCCTACAGCAACGAAGTG
ATCCTGATGCTCAAGGCCAGTGCCCTGGCCAGCACCGTGACCCTGCTGGAACTGACCGGCATGGCGCGCACGATCATTGC
CCGCACTTACCTGCCGGTGGAGATCTTCTTCGCCGCCGGCGTGTTCTATCTGGTGATGGCTTACGTGCTGGTTCGCGGCT
TCAAACTGCTGGAACGCTGGCTGCGCGTCGATGCGTGCCAGGGACGCTGA

Upstream 100 bases:

>100_bases
TGGTGGCGGCGCTCATGTACCTGGGCCTGACCGTGCTGGCGATGATCGGCATGCACCTGCTGGAAAAACGCGCCGCACGC
GGCTTCGCGAGGAGCGCTCA

Downstream 100 bases:

>100_bases
TACTTCTGACGTGCTAACGGGCGAGGCCCTACTCGCCCGTTTCACGGCACTGGATACATTTCTCACAGCGCATCAGGCGC
TGTGGAAACCCCGCCCGTTC

Product: amino acid ABC transporter permease

Products: ADP; phosphate; L-histidine [Cytoplasm]; ADP; L-ornithine [Cytoplasm]; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MNWEVIIKWLPKLAQGATLTLELVAIAVIAGLLLAIPLGIARSSKLWYVRALPYAYIFFFRGTPLLVQLFLVYYGLAQFD
AVRNSSMWPYLRDPFWCATATMTLHTAAYIAEILRGAIQAIPPGEIEAARALGMSRPKALFYIILPRAARIGLPAYSNEV
ILMLKASALASTVTLLELTGMARTIIARTYLPVEIFFAAGVFYLVMAYVLVRGFKLLERWLRVDACQGR

Sequences:

>Translated_229_residues
MNWEVIIKWLPKLAQGATLTLELVAIAVIAGLLLAIPLGIARSSKLWYVRALPYAYIFFFRGTPLLVQLFLVYYGLAQFD
AVRNSSMWPYLRDPFWCATATMTLHTAAYIAEILRGAIQAIPPGEIEAARALGMSRPKALFYIILPRAARIGLPAYSNEV
ILMLKASALASTVTLLELTGMARTIIARTYLPVEIFFAAGVFYLVMAYVLVRGFKLLERWLRVDACQGR
>Mature_229_residues
MNWEVIIKWLPKLAQGATLTLELVAIAVIAGLLLAIPLGIARSSKLWYVRALPYAYIFFFRGTPLLVQLFLVYYGLAQFD
AVRNSSMWPYLRDPFWCATATMTLHTAAYIAEILRGAIQAIPPGEIEAARALGMSRPKALFYIILPRAARIGLPAYSNEV
ILMLKASALASTVTLLELTGMARTIIARTYLPVEIFFAAGVFYLVMAYVLVRGFKLLERWLRVDACQGR

Specific function: Component of the octopine active transport system probably consisting of four subunits:Q, M, P and T [H]

COG id: COG4160

COG function: function code E; ABC-type arginine/histidine transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788645, Length=209, Percent_Identity=44.9760765550239, Blast_Score=155, Evalue=3e-39,
Organism=Escherichia coli, GI1787086, Length=219, Percent_Identity=40.1826484018265, Blast_Score=148, Evalue=3e-37,
Organism=Escherichia coli, GI1788226, Length=207, Percent_Identity=41.5458937198068, Blast_Score=134, Evalue=4e-33,
Organism=Escherichia coli, GI1787030, Length=223, Percent_Identity=34.9775784753363, Blast_Score=122, Evalue=1e-29,
Organism=Escherichia coli, GI1787087, Length=219, Percent_Identity=30.1369863013699, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1786874, Length=223, Percent_Identity=30.0448430493274, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1786873, Length=207, Percent_Identity=30.9178743961353, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI87082239, Length=207, Percent_Identity=29.4685990338164, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1788646, Length=212, Percent_Identity=33.4905660377358, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI48994930, Length=110, Percent_Identity=32.7272727272727, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 25564; Mature: 25564

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWEVIIKWLPKLAQGATLTLELVAIAVIAGLLLAIPLGIARSSKLWYVRALPYAYIFFF
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHH
RGTPLLVQLFLVYYGLAQFDAVRNSSMWPYLRDPFWCATATMTLHTAAYIAEILRGAIQA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
IPPGEIEAARALGMSRPKALFYIILPRAARIGLPAYSNEVILMLKASALASTVTLLELTG
CCCCCHHHHHHHCCCCCCEEEEEEECCHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHH
MARTIIARTYLPVEIFFAAGVFYLVMAYVLVRGFKLLERWLRVDACQGR
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNWEVIIKWLPKLAQGATLTLELVAIAVIAGLLLAIPLGIARSSKLWYVRALPYAYIFFF
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHH
RGTPLLVQLFLVYYGLAQFDAVRNSSMWPYLRDPFWCATATMTLHTAAYIAEILRGAIQA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
IPPGEIEAARALGMSRPKALFYIILPRAARIGLPAYSNEVILMLKASALASTVTLLELTG
CCCCCHHHHHHHCCCCCCEEEEEEECCHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHH
MARTIIARTYLPVEIFFAAGVFYLVMAYVLVRGFKLLERWLRVDACQGR
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-histidine [Periplasm]; H2O; ATP; L-ornithine [Periplasm]; L-arginine [Periplasm]; L-lysine [Periplasm] [C]

Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [P

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1655707; 1732218 [H]