| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yeiU [H]
Identifier: 77456494
GI number: 77456494
Start: 312596
End: 313396
Strand: Reverse
Name: yeiU [H]
Synonym: Pfl01_0266
Alternate gene names: 77456494
Gene position: 313396-312596 (Counterclockwise)
Preceding gene: 77456497
Following gene: 77456492
Centisome position: 4.87
GC content: 58.43
Gene sequence:
>801_bases ATGAACAATCCGGGTTTGTTCCAATCAAGGTGGAACCTCGGCCGGCTGGTTCTGTGCAACGTTGTGCCATTGGCACTGCT GGCTTTCTGGTTATGGCCTACAGGTCAGATGCTGTGTGTGATTTTCGACGAGTGGCTGTTCCGCTCACTCAATGCACCGC TGGCCAGCAACCCCATATGGCTCCACATCTGGGCAATTGCAAGTCTGCGACCGTTCGACATTGTCGTCGGTGTGATTCTG CTGATGCTGCTGATCAAGGGCGACTGGGTGTTCAGGGCAATTGATGTACGCCGCGCATTTTTCGGTTTTTTTTCGATCCT GCTGCTGATGGTGGTGATCCGCGCGCTGTTTTCCAAGTTCTCCGATCACATGGGCTGGCAGCACAGCAGCCCGTCGATGG TGCTCGAAGGCGCGGTGCATATCAGCGATTACTTCCCGCATCTGGAGAAGACCTGGGAGCTGAAGGACCGCTCGAGCCAG AGCTTCCCCGGTGACCACGCATCGGTGCTGCTGATCTGGGCTCTTTTCATGGGCGTGTTCAGCCGTACGGCTGGTCAGTT CCTGGTGATCTGGGGTCTGGCGCTGCTGTTCATGTTGCCTCGCCTGGTCGCCGGTGCACATTGGGGCCAGGACGATTACA TCGGCGGCATGCTGCTGGCGGTGTGGGCACTGGGCTGGGGTTACTACACGCCGTTTGCTTATCACGCGGCGAACTTCTGG CTGAAGGTCACGGCGCCGGTGTTCCGGCTGCTGGGCAAACTGCCGATGGTTTCGCGGATGAGCGTGGTGTCCGCGCAGTA A
Upstream 100 bases:
>100_bases CTGGGTATCTGAATGTGATGACAAAATGGTTACAAAGAATGAAAATCCCGCGCTTCTGGCATCCTTTTTGATGCCGATGT TCAGCCACGGGAGGCATTTT
Downstream 100 bases:
>100_bases TCAACGGTTACTGAAAAAACGCAGCCGCCGGCGGGTCTTGAGCCCAGGCCGTCAGGCTGCGTTTTTTTATTCGCCGCTAC TGTTCCCACGAAACTTAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MNNPGLFQSRWNLGRLVLCNVVPLALLAFWLWPTGQMLCVIFDEWLFRSLNAPLASNPIWLHIWAIASLRPFDIVVGVIL LMLLIKGDWVFRAIDVRRAFFGFFSILLLMVVIRALFSKFSDHMGWQHSSPSMVLEGAVHISDYFPHLEKTWELKDRSSQ SFPGDHASVLLIWALFMGVFSRTAGQFLVIWGLALLFMLPRLVAGAHWGQDDYIGGMLLAVWALGWGYYTPFAYHAANFW LKVTAPVFRLLGKLPMVSRMSVVSAQ
Sequences:
>Translated_266_residues MNNPGLFQSRWNLGRLVLCNVVPLALLAFWLWPTGQMLCVIFDEWLFRSLNAPLASNPIWLHIWAIASLRPFDIVVGVIL LMLLIKGDWVFRAIDVRRAFFGFFSILLLMVVIRALFSKFSDHMGWQHSSPSMVLEGAVHISDYFPHLEKTWELKDRSSQ SFPGDHASVLLIWALFMGVFSRTAGQFLVIWGLALLFMLPRLVAGAHWGQDDYIGGMLLAVWALGWGYYTPFAYHAANFW LKVTAPVFRLLGKLPMVSRMSVVSAQ >Mature_266_residues MNNPGLFQSRWNLGRLVLCNVVPLALLAFWLWPTGQMLCVIFDEWLFRSLNAPLASNPIWLHIWAIASLRPFDIVVGVIL LMLLIKGDWVFRAIDVRRAFFGFFSILLLMVVIRALFSKFSDHMGWQHSSPSMVLEGAVHISDYFPHLEKTWELKDRSSQ SFPGDHASVLLIWALFMGVFSRTAGQFLVIWGLALLFMLPRLVAGAHWGQDDYIGGMLLAVWALGWGYYTPFAYHAANFW LKVTAPVFRLLGKLPMVSRMSVVSAQ
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BcrC/YbjG family [H]
Homologues:
Organism=Escherichia coli, GI87082062, Length=236, Percent_Identity=28.8135593220339, Blast_Score=76, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016118 - InterPro: IPR000326 [H]
Pfam domain/function: PF01569 PAP2 [H]
EC number: NA
Molecular weight: Translated: 30272; Mature: 30272
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNPGLFQSRWNLGRLVLCNVVPLALLAFWLWPTGQMLCVIFDEWLFRSLNAPLASNPIW CCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEE LHIWAIASLRPFDIVVGVILLMLLIKGDWVFRAIDVRRAFFGFFSILLLMVVIRALFSKF EEEEEHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDHMGWQHSSPSMVLEGAVHISDYFPHLEKTWELKDRSSQSFPGDHASVLLIWALFMGVF HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH SRTAGQFLVIWGLALLFMLPRLVAGAHWGQDDYIGGMLLAVWALGWGYYTPFAYHAANFW HHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHH LKVTAPVFRLLGKLPMVSRMSVVSAQ EEHHHHHHHHHCCCCHHHHHHHHCCC >Mature Secondary Structure MNNPGLFQSRWNLGRLVLCNVVPLALLAFWLWPTGQMLCVIFDEWLFRSLNAPLASNPIW CCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEE LHIWAIASLRPFDIVVGVILLMLLIKGDWVFRAIDVRRAFFGFFSILLLMVVIRALFSKF EEEEEHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDHMGWQHSSPSMVLEGAVHISDYFPHLEKTWELKDRSSQSFPGDHASVLLIWALFMGVF HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH SRTAGQFLVIWGLALLFMLPRLVAGAHWGQDDYIGGMLLAVWALGWGYYTPFAYHAANFW HHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHH LKVTAPVFRLLGKLPMVSRMSVVSAQ EEHHHHHHHHHCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]