| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456445
Identifier: 77456445
GI number: 77456445
Start: 259803
End: 260363
Strand: Reverse
Name: 77456445
Synonym: Pfl01_0217
Alternate gene names: NA
Gene position: 260363-259803 (Counterclockwise)
Preceding gene: 77456457
Following gene: 77456443
Centisome position: 4.04
GC content: 44.03
Gene sequence:
>561_bases ATGAAACTCAATAATTTCGTTATAGCCCTCGCTCTGCTTTCATCGACCCTGCTGCACGCAGCCGAAGAATCAAAATCTGC CGATTTCAAAACGGATTTCAAGAACGCTTCCCAAGCTCTAACACTTATAGCTAAAATCTACGGACACCCCGATACGAATT TATTACCCGGAGAAAATATCTCTATACCATTCTTACCTGTCGCAGGCGCCATTATTAATGCCTCCGCGAGCGGCAAAATC CAGCACATTTCGATTTCCCGGGTGGGGTGCCCTCAAGAACTGTGCGTTGTCCTGTCTGACTCTAAAAAATCTAATTCATC GTTGAACAAGACTGCGGCTCAACGTCGCATAACCCCTGATTTCGAGATCATCAACAAAGGAACATCAAACATTACGGCTC GTAAAGTAGACGATTTGTCTTGGGTAACCATTCCACCCGGAGGATCAGCGAAAATTGGCAACATCAATGATTCAGGATTT CATATAGATGGGTATATGAAGATAATCCAAATTGACAAGCAAAAGTGCACTCTCGAACACTGCTTTTGGGTTCTAGAGTA G
Upstream 100 bases:
>100_bases ATTATTGAAAATCTTCAAAACCTGTAATTTCTGACAGTATCGCCACTGTCAAAAACATCATCAAATGAGGGCGTATTACC TACTACGTTGAGAAACCCTT
Downstream 100 bases:
>100_bases CCAAATCCATTCAAAGCATACTTCAGCCTTACTTATGCCGACCTTCTATGTTAATACTTCCTCGAAATATGCCCTTTCTT AATACATATCAGATACTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MKLNNFVIALALLSSTLLHAAEESKSADFKTDFKNASQALTLIAKIYGHPDTNLLPGENISIPFLPVAGAIINASASGKI QHISISRVGCPQELCVVLSDSKKSNSSLNKTAAQRRITPDFEIINKGTSNITARKVDDLSWVTIPPGGSAKIGNINDSGF HIDGYMKIIQIDKQKCTLEHCFWVLE
Sequences:
>Translated_186_residues MKLNNFVIALALLSSTLLHAAEESKSADFKTDFKNASQALTLIAKIYGHPDTNLLPGENISIPFLPVAGAIINASASGKI QHISISRVGCPQELCVVLSDSKKSNSSLNKTAAQRRITPDFEIINKGTSNITARKVDDLSWVTIPPGGSAKIGNINDSGF HIDGYMKIIQIDKQKCTLEHCFWVLE >Mature_186_residues MKLNNFVIALALLSSTLLHAAEESKSADFKTDFKNASQALTLIAKIYGHPDTNLLPGENISIPFLPVAGAIINASASGKI QHISISRVGCPQELCVVLSDSKKSNSSLNKTAAQRRITPDFEIINKGTSNITARKVDDLSWVTIPPGGSAKIGNINDSGF HIDGYMKIIQIDKQKCTLEHCFWVLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20148; Mature: 20148
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLNNFVIALALLSSTLLHAAEESKSADFKTDFKNASQALTLIAKIYGHPDTNLLPGENI CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC SIPFLPVAGAIINASASGKIQHISISRVGCPQELCVVLSDSKKSNSSLNKTAAQRRITPD CCCEEECCCEEEECCCCCEEEEEEEECCCCHHHHEEEECCCCCCCCHHHHHHHHHCCCCC FEIINKGTSNITARKVDDLSWVTIPPGGSAKIGNINDSGFHIDGYMKIIQIDKQKCTLEH HHEECCCCCCCEEEEECCCEEEEECCCCCEEECCCCCCCEEECCEEEEEEECCCHHHHHH CFWVLE EEEECC >Mature Secondary Structure MKLNNFVIALALLSSTLLHAAEESKSADFKTDFKNASQALTLIAKIYGHPDTNLLPGENI CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC SIPFLPVAGAIINASASGKIQHISISRVGCPQELCVVLSDSKKSNSSLNKTAAQRRITPD CCCEEECCCEEEECCCCCEEEEEEEECCCCHHHHEEEECCCCCCCCHHHHHHHHHCCCCC FEIINKGTSNITARKVDDLSWVTIPPGGSAKIGNINDSGFHIDGYMKIIQIDKQKCTLEH HHEECCCCCCCEEEEECCCEEEEECCCCCEEECCCCCCCEEECCEEEEEEECCCHHHHHH CFWVLE EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA