| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77456457
Identifier: 77456457
GI number: 77456457
Start: 268890
End: 270050
Strand: Reverse
Name: 77456457
Synonym: Pfl01_0229
Alternate gene names: NA
Gene position: 270050-268890 (Counterclockwise)
Preceding gene: 77456461
Following gene: 77456445
Centisome position: 4.19
GC content: 64.69
Gene sequence:
>1161_bases ATGCTCAAGACCCTCGCGGTGGCCAATTACCGCTCGATCAATAAATTGGTGATTCCGCTGGGCCGTCTGAACCTGATCAC TGGCCCCAACGGCAGCGGCAAGTCCAACCTGTACCGGGCGCTGCGGCTGCTGGCGGAAACCGCTCAGGGCGGCGTGGTCA ATGCGCTGGCCCGTGAGGGCGGGCTAGACTCGACGTTCTGGGCCGGGCCGGAAACCATCAGCCGGCGCATGCGCAACGGT GAAGTGCCGATCCAGTCCACCGTGCGCCAGGGCGTCAAACGCCTGCGTCTGGGCTTTGCCGGGGAGGATTTCAGTTATTC GATCGCCCTGGGATTGCCTGAGCCGAGCCTCTCGTACTTTTCCCTCGACCCGGAAATCAAAAAGGAATGCATCTGGGCCG GGCCGCTTTATCGTCCGGCCAGCCTGCTGGTGGATCGCGACGGGCCGATGATCCGTACCCGCGACGGTCGCAGTTGGGAC GTGCTGGCCCAGCACACGCCGAACTTCGACAGCCTGTTCGATCAGGTCGGCAGCCTGCGCACCTCGCCGGAAGTGTTCCA GATGCGTGAGTTCATCCGCCGCTGGCGCTTCTACGACCACTTTCGCAGCGACGCCGACGCCCCGGTGCGCCAGCCGCAAC TGGGCACGCGCACGCCGGTGCTGCATCACGACGGGCGCGATCTGGCGGCGGCGTTGCAGACCATCCGCGAGATCGGCGAT CCCGAGGCGCTGCAGGCGGCGATCAGTGATGCGTTTCCCGGTGCACGCCTGAACATTGCGCCGCTGGCGGGCGGACGCTT CGCCATCGAGTTCTTTCAGGAAGGGTTGTTGCGGCCGTTGTCGGCGGCGGAACTGTCGGATGGCACGTTGCGCTATCTGC TGCTGGTCGCCGCGCTCCTGACGCCACGCCCGCCATCGCTGATGGTGCTGAACGAGCCGGAAACCAGCCTGCATCCGGAC CTGCTGCCGGCGCTGGCACGCTTGATCATCCGGGTGTCGGAGCAGTGTCAGGTGTGGGTGGTGTCCCATGCCCGACGATT GATTTCGGCGTTGCAGGAGGACCCGGAATGCAATTGCATCGTGCTGGAAAAAACCCTCGGCCAGACCGGAATAGTCGGGC AGAGGGTTCTGGATGAGCCGGCGTGGAATTGGCCTGATTAG
Upstream 100 bases:
>100_bases GTGAGCTTAGAACAGGGTTCAACCTTCGTCCGGGCGATATATGCATTTCTGTGCGGCGAGTATCCTTATCCGGATTTCGG GGCACCCAGGAAGGATTTTC
Downstream 100 bases:
>100_bases CCCTGCCACTTCCCGCCTTCGACAATCACGCTCTCTGGCTTGGTGTCATCGCTCAGCTCTTTGCGCACGTATTGGTCATA CAGCTTGAGCAGGTATTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: SMC Domain-Containing Protein; ATPase-Like Protein; RecF Protein; ATPase RecF-Like Protein; RecF/RecN/SMC N Terminal Domain; Recf Like Family Protein; SMC Domain Protein; RecF/RecN/SMC Domain-Containing Protein; ATPase RecF-Like; DNA Replication And Repair Protein RecF
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MLKTLAVANYRSINKLVIPLGRLNLITGPNGSGKSNLYRALRLLAETAQGGVVNALAREGGLDSTFWAGPETISRRMRNG EVPIQSTVRQGVKRLRLGFAGEDFSYSIALGLPEPSLSYFSLDPEIKKECIWAGPLYRPASLLVDRDGPMIRTRDGRSWD VLAQHTPNFDSLFDQVGSLRTSPEVFQMREFIRRWRFYDHFRSDADAPVRQPQLGTRTPVLHHDGRDLAAALQTIREIGD PEALQAAISDAFPGARLNIAPLAGGRFAIEFFQEGLLRPLSAAELSDGTLRYLLLVAALLTPRPPSLMVLNEPETSLHPD LLPALARLIIRVSEQCQVWVVSHARRLISALQEDPECNCIVLEKTLGQTGIVGQRVLDEPAWNWPD
Sequences:
>Translated_386_residues MLKTLAVANYRSINKLVIPLGRLNLITGPNGSGKSNLYRALRLLAETAQGGVVNALAREGGLDSTFWAGPETISRRMRNG EVPIQSTVRQGVKRLRLGFAGEDFSYSIALGLPEPSLSYFSLDPEIKKECIWAGPLYRPASLLVDRDGPMIRTRDGRSWD VLAQHTPNFDSLFDQVGSLRTSPEVFQMREFIRRWRFYDHFRSDADAPVRQPQLGTRTPVLHHDGRDLAAALQTIREIGD PEALQAAISDAFPGARLNIAPLAGGRFAIEFFQEGLLRPLSAAELSDGTLRYLLLVAALLTPRPPSLMVLNEPETSLHPD LLPALARLIIRVSEQCQVWVVSHARRLISALQEDPECNCIVLEKTLGQTGIVGQRVLDEPAWNWPD >Mature_386_residues MLKTLAVANYRSINKLVIPLGRLNLITGPNGSGKSNLYRALRLLAETAQGGVVNALAREGGLDSTFWAGPETISRRMRNG EVPIQSTVRQGVKRLRLGFAGEDFSYSIALGLPEPSLSYFSLDPEIKKECIWAGPLYRPASLLVDRDGPMIRTRDGRSWD VLAQHTPNFDSLFDQVGSLRTSPEVFQMREFIRRWRFYDHFRSDADAPVRQPQLGTRTPVLHHDGRDLAAALQTIREIGD PEALQAAISDAFPGARLNIAPLAGGRFAIEFFQEGLLRPLSAAELSDGTLRYLLLVAALLTPRPPSLMVLNEPETSLHPD LLPALARLIIRVSEQCQVWVVSHARRLISALQEDPECNCIVLEKTLGQTGIVGQRVLDEPAWNWPD
Specific function: Unknown
COG id: COG4637
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42812; Mature: 42812
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKTLAVANYRSINKLVIPLGRLNLITGPNGSGKSNLYRALRLLAETAQGGVVNALAREG CCCCEEHHCHHCCCCEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCC GLDSTFWAGPETISRRMRNGEVPIQSTVRQGVKRLRLGFAGEDFSYSIALGLPEPSLSYF CCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEE SLDPEIKKECIWAGPLYRPASLLVDRDGPMIRTRDGRSWDVLAQHTPNFDSLFDQVGSLR ECCHHHHHHHCCCCCCCCCHHEEEECCCCEEEECCCCCEEHHCCCCCCHHHHHHHHHCCC TSPEVFQMREFIRRWRFYDHFRSDADAPVRQPQLGTRTPVLHHDGRDLAAALQTIREIGD CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCC PEALQAAISDAFPGARLNIAPLAGGRFAIEFFQEGLLRPLSAAELSDGTLRYLLLVAALL HHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHH TPRPPSLMVLNEPETSLHPDLLPALARLIIRVSEQCQVWVVSHARRLISALQEDPECNCI CCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCEE VLEKTLGQTGIVGQRVLDEPAWNWPD EEECCCCCCCCCHHHHHCCCCCCCCC >Mature Secondary Structure MLKTLAVANYRSINKLVIPLGRLNLITGPNGSGKSNLYRALRLLAETAQGGVVNALAREG CCCCEEHHCHHCCCCEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCC GLDSTFWAGPETISRRMRNGEVPIQSTVRQGVKRLRLGFAGEDFSYSIALGLPEPSLSYF CCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEE SLDPEIKKECIWAGPLYRPASLLVDRDGPMIRTRDGRSWDVLAQHTPNFDSLFDQVGSLR ECCHHHHHHHCCCCCCCCCHHEEEECCCCEEEECCCCCEEHHCCCCCCHHHHHHHHHCCC TSPEVFQMREFIRRWRFYDHFRSDADAPVRQPQLGTRTPVLHHDGRDLAAALQTIREIGD CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCC PEALQAAISDAFPGARLNIAPLAGGRFAIEFFQEGLLRPLSAAELSDGTLRYLLLVAALL HHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHH TPRPPSLMVLNEPETSLHPDLLPALARLIIRVSEQCQVWVVSHARRLISALQEDPECNCI CCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCEE VLEKTLGQTGIVGQRVLDEPAWNWPD EEECCCCCCCCCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA