| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is tauD [C]
Identifier: 77456441
GI number: 77456441
Start: 253352
End: 254272
Strand: Direct
Name: tauD [C]
Synonym: Pfl01_0213
Alternate gene names: 77456441
Gene position: 253352-254272 (Clockwise)
Preceding gene: 77456439
Following gene: 77456444
Centisome position: 3.94
GC content: 62.76
Gene sequence:
>921_bases ATGAGCAATGCCGCACTCGCTGTAAAACCCGCTGTCCACGCGCTGGACATTCATCCGGTGGCCGGCCGTATCGGCGCCGA AATCCGTGGCGTGCACTTGTCCGGTGAGCTGGATGCCGCGACGGTTGAAGCCATTCAACAGGCGCTGATCCAGTACAAGG TCGTGTTCTTCCGCGAGCAGACCCAGCTCGACGATCAACGTCAGGAAGCCTTCGCGCATCTGCTCGGCGAGCCCGTGGCG CACCCGACCGTGCCGTCCCGCGAGGGTACCCGTTACCTCCTGGAACTGGACGGCGCCGAAGGGCAGCGCGCCAACTCGTG GCACACCGACGTGACCTTCGTCGATGCCTACCCGAAAGCCTCGATCCTGCGCTCGGTGGTGGCCCCGGCGTTCGGTGGCG ACACGCTGTGGGCGAACACCGCGACCGCGTACAACGAACTGCCGACCGAGTTGCGCGAGCTGGCAGACAAACTGGTGGCT GTGCACAGCAACGAATACGACTACGCCGCCGTGAAGCCGGACGTGTCGGCGGAGAAGCTTGAGCGCTATCGCAAGATCTT CACCTCTACCGTCTACGAAACCGAGCACCCGGTGGTCCGCGTGCACCCGATCAGCGGCGAAAAGAGCTTGCTGCTGGGGC ATTTCGTCAAACGCATCAAGGGCTATTCCCAGGCCGATTCGGCGCACCTGTTCGGCTTGCTGCAAAGTCATGTGATCCGT CAGGAGAACGTCGTGCGCTGGCGCTGGAAGGCCGGTGATGTGGCGATCTGGGATAACCGCTCGACCCAGCATTACGCGAT TGATGATTACGGCACTCAGGATCGGGTGGTGCGTCGGGTAACGCTCAAAGGGGAAGTGCCGGTCGGGGCGAATGGGCAGC GTAGCCAGACCATCAAAGGGGCTGAGATCGTCGGCGTTTGA
Upstream 100 bases:
>100_bases CGTCAAAGAAGCATGTCAATATCTATTAGATGTAAATGGAATATAGATAGAGCGTTGTTTCGCTGCCGTCCAACCGCAAG CAGTCGATGAGGGTCTATCC
Downstream 100 bases:
>100_bases TAACTGATCGTTCCCACGTCGAGGCGTCGAACCGTCTGCGTGGGAATGCCTCAATGGACGCTCTGCGTCCGCTTTGGGAC GCGGAGCGTCCCGGGCTGCA
Product: taurine dioxygenase
Products: Aminoacetaldehyde; CO2; H+; Sulfite; Succinate [C]
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MSNAALAVKPAVHALDIHPVAGRIGAEIRGVHLSGELDAATVEAIQQALIQYKVVFFREQTQLDDQRQEAFAHLLGEPVA HPTVPSREGTRYLLELDGAEGQRANSWHTDVTFVDAYPKASILRSVVAPAFGGDTLWANTATAYNELPTELRELADKLVA VHSNEYDYAAVKPDVSAEKLERYRKIFTSTVYETEHPVVRVHPISGEKSLLLGHFVKRIKGYSQADSAHLFGLLQSHVIR QENVVRWRWKAGDVAIWDNRSTQHYAIDDYGTQDRVVRRVTLKGEVPVGANGQRSQTIKGAEIVGV
Sequences:
>Translated_306_residues MSNAALAVKPAVHALDIHPVAGRIGAEIRGVHLSGELDAATVEAIQQALIQYKVVFFREQTQLDDQRQEAFAHLLGEPVA HPTVPSREGTRYLLELDGAEGQRANSWHTDVTFVDAYPKASILRSVVAPAFGGDTLWANTATAYNELPTELRELADKLVA VHSNEYDYAAVKPDVSAEKLERYRKIFTSTVYETEHPVVRVHPISGEKSLLLGHFVKRIKGYSQADSAHLFGLLQSHVIR QENVVRWRWKAGDVAIWDNRSTQHYAIDDYGTQDRVVRRVTLKGEVPVGANGQRSQTIKGAEIVGV >Mature_305_residues SNAALAVKPAVHALDIHPVAGRIGAEIRGVHLSGELDAATVEAIQQALIQYKVVFFREQTQLDDQRQEAFAHLLGEPVAH PTVPSREGTRYLLELDGAEGQRANSWHTDVTFVDAYPKASILRSVVAPAFGGDTLWANTATAYNELPTELRELADKLVAV HSNEYDYAAVKPDVSAEKLERYRKIFTSTVYETEHPVVRVHPISGEKSLLLGHFVKRIKGYSQADSAHLFGLLQSHVIRQ ENVVRWRWKAGDVAIWDNRSTQHYAIDDYGTQDRVVRRVTLKGEVPVGANGQRSQTIKGAEIVGV
Specific function: Catalyzes The Conversion Of Taurine And Alpha Ketoglutarate To Sulfite, Aminoacetaldehyde And Succinate. Required For The Utilization Of Taurine (2-Aminoethanesulfonic Acid) As An Alternative Sulfur Source. Pentane-Sulfonic Acid, 3- (N-Morpholino)Propanes
COG id: COG2175
COG function: function code Q; Probable taurine catabolism dioxygenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tfdA dioxygenase family [H]
Homologues:
Organism=Escherichia coli, GI1786565, Length=281, Percent_Identity=37.0106761565836, Blast_Score=181, Evalue=4e-47, Organism=Saccharomyces cerevisiae, GI6322971, Length=303, Percent_Identity=27.3927392739274, Blast_Score=96, Evalue=5e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003819 [H]
Pfam domain/function: PF02668 TauD [H]
EC number: 1.14.11.17 [C]
Molecular weight: Translated: 33933; Mature: 33801
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNAALAVKPAVHALDIHPVAGRIGAEIRGVHLSGELDAATVEAIQQALIQYKVVFFREQ CCCCCEEECCCEEEEECCCHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHEEECH TQLDDQRQEAFAHLLGEPVAHPTVPSREGTRYLLELDGAEGQRANSWHTDVTFVDAYPKA HHCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCHH SILRSVVAPAFGGDTLWANTATAYNELPTELRELADKLVAVHSNEYDYAAVKPDVSAEKL HHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHH ERYRKIFTSTVYETEHPVVRVHPISGEKSLLLGHFVKRIKGYSQADSAHLFGLLQSHVIR HHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC QENVVRWRWKAGDVAIWDNRSTQHYAIDDYGTQDRVVRRVTLKGEVPVGANGQRSQTIKG CCCEEEEEEECCCEEEECCCCCCEEEECCCCCHHHEEEEEEEECCCCCCCCCCCCCCCCC AEIVGV EEEECC >Mature Secondary Structure SNAALAVKPAVHALDIHPVAGRIGAEIRGVHLSGELDAATVEAIQQALIQYKVVFFREQ CCCCEEECCCEEEEECCCHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHEEECH TQLDDQRQEAFAHLLGEPVAHPTVPSREGTRYLLELDGAEGQRANSWHTDVTFVDAYPKA HHCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCHH SILRSVVAPAFGGDTLWANTATAYNELPTELRELADKLVAVHSNEYDYAAVKPDVSAEKL HHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHH ERYRKIFTSTVYETEHPVVRVHPISGEKSLLLGHFVKRIKGYSQADSAHLFGLLQSHVIR HHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC QENVVRWRWKAGDVAIWDNRSTQHYAIDDYGTQDRVVRRVTLKGEVPVGANGQRSQTIKG CCCEEEEEEECCCEEEECCCCCCEEEECCCCCHHHEEEEEEEECCCCCCCCCCCCCCCCC AEIVGV EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: Ascorbate. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-Oxoglutarate; O2; Taurine [C]
Specific reaction: 2-Oxoglutarate + O2 + Taurine --> Aminoacetaldehyde + CO2 + H+ + Sulfite + Succinate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]