| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is atsA [H]
Identifier: 77456436
GI number: 77456436
Start: 246858
End: 248468
Strand: Reverse
Name: atsA [H]
Synonym: Pfl01_0208
Alternate gene names: 77456436
Gene position: 248468-246858 (Counterclockwise)
Preceding gene: 77456437
Following gene: 77456434
Centisome position: 3.86
GC content: 63.38
Gene sequence:
>1611_bases ATGCCGCAACGTCCCAACTTTCTGGTGATTCTGGCCGATGACCTCGGCTTCTCCGACATCGGCGCGTTCGGCGGCGAAAT CGCCACGCCGAACCTCGATGCCCTGGCCAACAATGGCCTGCGCCTGACCGATTTTCACACCGCACCGACCTGCTCGCCGA CCCGCTCGATGCTGCTCACCGGCACCGATCACCACATCGCCGGCATCGGCACCATGGCCGAAACCCTGACCCCGGAGCTG ATCGGCAAACCGGGTTACGAAGGCTATCTCAACGACCGCGTCGTCGCGCTGCCGGAGTTGCTGCGCGAGGCCGGTTACCA GACCTTGATGAGCGGCAAATGGCACCTGGGCCTGACCGCCGAACTGGCGCCCCACGCCCGAGGTTTCGAGCGTTCGTTCT CGCTGCTGCCCGGCGCGGCCAACCACTACGGATTCGAACCGACCTACGACGAACACACGCCCGGCCTGCTGAAATCCACT CCGGCGCTGTACATCGAGGACGACACGTTCATCGACGAATTGCCGAAGGATTTCTATTCCTCCGACGCTTTCGGCGACAA GCTGCTGCAGTACCTCAAGGAGCGCGATCAGAGCCGGCCGTTCTTCGCCTATCTGCCGTTTTCCGCGCCGCACTGGCCGC TGCAGGCGCCCGCCGACATCGTCGAAAAATATCGCGGCCGCTACGACGCGGGGCCGGAAGTGCTGCGCCTCGAGCGTCTG GAAAAACTCAAATCGCTGGGGCTGATCGAGCCGGATGTCGAACCGCATCCGCTGATCAAGCTGACCGCGCAATGGGGCGC GCTGAGCGATGAACAAAAACGCATTTCCGCCCGGGCAATGGAAGTCTATGCAGCGATGGTCGAGCGCATGGACTGGAACA TCGGGCGCGTCGTCGATTACCTGCGCCAGCAGGGCCAGCTCGACAACACCTTCATCCTGTTCATGTCCGACAACGGTGCC GAAGGCGCGCTGCTGGAAGCCTTCCCCAAATTCGGTCCGGATCTGGTGACCTACCTGAGCCAGCACTACGACAACAGCCT CGACAACATCGGCCGCGCCAATTCCTACGTCTGGTACGGGCCGAACTGGGCGCAGGTGGCGACCGCGCCGTCACGCCTGT TCAAGGCGTTCACCACCGAGGGCGGGATTCGCGTTCCGGCGCTGCTGCACTATCCGCAACTGCCGCTGAAGGGACAGATC AGCCACGGTTTCGGCACGGTGATGGACATCACGCCGACTATCCTCGATCTGGCCGGCGTGCGCCATCCCGGCAAGCAGTG GCACGGCAAACCGGTGGCGCCGTTGCGTGGTAAATCGTGGCTGGGTTTCCTGTCCGGCGAGACGGCGCAGGTGCATGACG AACACACCGTTACCGGTTGGGAATTGTTCGGGCGCCGGGCGATTCGGCAGGGTCAGTGGAAGGCGGTGTGGATCCCCGGG CCAGTGGGGCCGGCGACCTGGCAGCTTTACGACCTGGGGAGTGATCCGGGGGAGATTCATGACCTGGCGTCGAGTCAGCC GCAGAAGCTTGAAGCGCTGATCGAGCATTGGCAGCGGTATGTGGAGGAGACCGGGGTGATCTTGAGTGAGTCGCCGTTTC AGCCGGATTGA
Upstream 100 bases:
>100_bases TGCACGAGCTGACCAGTGACGACCATTACCAACCGAGCGTGCCGGTACAGATCCGTGATCTGCCGTTGTCGTTCATTGCC TGCTGAACAGGAGCCTGTTG
Downstream 100 bases:
>100_bases GATTTAGCTCAAGAGCTGCCCTCATCGGAACGCCGCCCGCCCAGCCCTCTCCCGGAGGGAGAGGGCTGGGGTGTTCCGCG TTATACATCGACCTGAAATA
Product: sulfatase
Products: NA
Alternate protein names: AS; Aryl-sulfate sulphohydrolase [H]
Number of amino acids: Translated: 536; Mature: 535
Protein sequence:
>536_residues MPQRPNFLVILADDLGFSDIGAFGGEIATPNLDALANNGLRLTDFHTAPTCSPTRSMLLTGTDHHIAGIGTMAETLTPEL IGKPGYEGYLNDRVVALPELLREAGYQTLMSGKWHLGLTAELAPHARGFERSFSLLPGAANHYGFEPTYDEHTPGLLKST PALYIEDDTFIDELPKDFYSSDAFGDKLLQYLKERDQSRPFFAYLPFSAPHWPLQAPADIVEKYRGRYDAGPEVLRLERL EKLKSLGLIEPDVEPHPLIKLTAQWGALSDEQKRISARAMEVYAAMVERMDWNIGRVVDYLRQQGQLDNTFILFMSDNGA EGALLEAFPKFGPDLVTYLSQHYDNSLDNIGRANSYVWYGPNWAQVATAPSRLFKAFTTEGGIRVPALLHYPQLPLKGQI SHGFGTVMDITPTILDLAGVRHPGKQWHGKPVAPLRGKSWLGFLSGETAQVHDEHTVTGWELFGRRAIRQGQWKAVWIPG PVGPATWQLYDLGSDPGEIHDLASSQPQKLEALIEHWQRYVEETGVILSESPFQPD
Sequences:
>Translated_536_residues MPQRPNFLVILADDLGFSDIGAFGGEIATPNLDALANNGLRLTDFHTAPTCSPTRSMLLTGTDHHIAGIGTMAETLTPEL IGKPGYEGYLNDRVVALPELLREAGYQTLMSGKWHLGLTAELAPHARGFERSFSLLPGAANHYGFEPTYDEHTPGLLKST PALYIEDDTFIDELPKDFYSSDAFGDKLLQYLKERDQSRPFFAYLPFSAPHWPLQAPADIVEKYRGRYDAGPEVLRLERL EKLKSLGLIEPDVEPHPLIKLTAQWGALSDEQKRISARAMEVYAAMVERMDWNIGRVVDYLRQQGQLDNTFILFMSDNGA EGALLEAFPKFGPDLVTYLSQHYDNSLDNIGRANSYVWYGPNWAQVATAPSRLFKAFTTEGGIRVPALLHYPQLPLKGQI SHGFGTVMDITPTILDLAGVRHPGKQWHGKPVAPLRGKSWLGFLSGETAQVHDEHTVTGWELFGRRAIRQGQWKAVWIPG PVGPATWQLYDLGSDPGEIHDLASSQPQKLEALIEHWQRYVEETGVILSESPFQPD >Mature_535_residues PQRPNFLVILADDLGFSDIGAFGGEIATPNLDALANNGLRLTDFHTAPTCSPTRSMLLTGTDHHIAGIGTMAETLTPELI GKPGYEGYLNDRVVALPELLREAGYQTLMSGKWHLGLTAELAPHARGFERSFSLLPGAANHYGFEPTYDEHTPGLLKSTP ALYIEDDTFIDELPKDFYSSDAFGDKLLQYLKERDQSRPFFAYLPFSAPHWPLQAPADIVEKYRGRYDAGPEVLRLERLE KLKSLGLIEPDVEPHPLIKLTAQWGALSDEQKRISARAMEVYAAMVERMDWNIGRVVDYLRQQGQLDNTFILFMSDNGAE GALLEAFPKFGPDLVTYLSQHYDNSLDNIGRANSYVWYGPNWAQVATAPSRLFKAFTTEGGIRVPALLHYPQLPLKGQIS HGFGTVMDITPTILDLAGVRHPGKQWHGKPVAPLRGKSWLGFLSGETAQVHDEHTVTGWELFGRRAIRQGQWKAVWIPGP VGPATWQLYDLGSDPGEIHDLASSQPQKLEALIEHWQRYVEETGVILSESPFQPD
Specific function: Unknown
COG id: COG3119
COG function: function code P; Arylsulfatase A and related enzymes
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sulfatase family [H]
Homologues:
Organism=Homo sapiens, GI109389362, Length=416, Percent_Identity=28.3653846153846, Blast_Score=149, Evalue=9e-36, Organism=Homo sapiens, GI38569405, Length=567, Percent_Identity=26.2786596119929, Blast_Score=139, Evalue=8e-33, Organism=Homo sapiens, GI59797060, Length=556, Percent_Identity=26.4388489208633, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI38569407, Length=319, Percent_Identity=30.4075235109718, Blast_Score=132, Evalue=9e-31, Organism=Homo sapiens, GI45430057, Length=498, Percent_Identity=27.5100401606426, Blast_Score=112, Evalue=1e-24, Organism=Homo sapiens, GI4503899, Length=252, Percent_Identity=33.7301587301587, Blast_Score=102, Evalue=8e-22, Organism=Homo sapiens, GI157266309, Length=141, Percent_Identity=36.1702127659575, Blast_Score=84, Evalue=4e-16, Organism=Homo sapiens, GI146229331, Length=264, Percent_Identity=31.0606060606061, Blast_Score=82, Evalue=9e-16, Organism=Homo sapiens, GI146229329, Length=264, Percent_Identity=31.0606060606061, Blast_Score=82, Evalue=9e-16, Organism=Homo sapiens, GI6005990, Length=264, Percent_Identity=31.0606060606061, Blast_Score=82, Evalue=9e-16, Organism=Homo sapiens, GI146229324, Length=264, Percent_Identity=31.0606060606061, Blast_Score=82, Evalue=9e-16, Organism=Homo sapiens, GI53831991, Length=121, Percent_Identity=35.5371900826446, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI58743319, Length=119, Percent_Identity=37.8151260504202, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI71852584, Length=119, Percent_Identity=38.655462184874, Blast_Score=74, Evalue=5e-13, Organism=Homo sapiens, GI71852586, Length=119, Percent_Identity=38.655462184874, Blast_Score=74, Evalue=5e-13, Organism=Homo sapiens, GI31742482, Length=120, Percent_Identity=36.6666666666667, Blast_Score=73, Evalue=8e-13, Organism=Escherichia coli, GI1790233, Length=438, Percent_Identity=27.8538812785388, Blast_Score=112, Evalue=9e-26, Organism=Caenorhabditis elegans, GI115533416, Length=536, Percent_Identity=25.5597014925373, Blast_Score=113, Evalue=3e-25, Organism=Caenorhabditis elegans, GI115533418, Length=528, Percent_Identity=25, Blast_Score=103, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17559078, Length=264, Percent_Identity=29.9242424242424, Blast_Score=86, Evalue=5e-17, Organism=Drosophila melanogaster, GI281363223, Length=518, Percent_Identity=26.2548262548263, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI281366397, Length=331, Percent_Identity=31.4199395770393, Blast_Score=128, Evalue=1e-29, Organism=Drosophila melanogaster, GI281366395, Length=331, Percent_Identity=31.4199395770393, Blast_Score=128, Evalue=1e-29, Organism=Drosophila melanogaster, GI24666163, Length=331, Percent_Identity=31.4199395770393, Blast_Score=128, Evalue=1e-29, Organism=Drosophila melanogaster, GI24666175, Length=480, Percent_Identity=26.4583333333333, Blast_Score=126, Evalue=3e-29, Organism=Drosophila melanogaster, GI24666109, Length=331, Percent_Identity=28.3987915407855, Blast_Score=112, Evalue=8e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: =3.1.6.1 [H]
Molecular weight: Translated: 59709; Mature: 59578
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: PS00523 SULFATASE_1 ; PS00149 SULFATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQRPNFLVILADDLGFSDIGAFGGEIATPNLDALANNGLRLTDFHTAPTCSPTRSMLLT CCCCCCEEEEEECCCCCHHHHHCCCCCCCCCHHHHHCCCEEEEECCCCCCCCCCCCEEEE GTDHHIAGIGTMAETLTPELIGKPGYEGYLNDRVVALPELLREAGYQTLMSGKWHLGLTA CCCCCHHHHHHHHHHHCHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHCCCEEEEEEC ELAPHARGFERSFSLLPGAANHYGFEPTYDEHTPGLLKSTPALYIEDDTFIDELPKDFYS CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEECCHHHHHHHHHHHC SDAFGDKLLQYLKERDQSRPFFAYLPFSAPHWPLQAPADIVEKYRGRYDAGPEVLRLERL CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHH EKLKSLGLIEPDVEPHPLIKLTAQWGALSDEQKRISARAMEVYAAMVERMDWNIGRVVDY HHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LRQQGQLDNTFILFMSDNGAEGALLEAFPKFGPDLVTYLSQHYDNSLDNIGRANSYVWYG HHHCCCCCCEEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHCCHHHHCCCCCCEEEEC PNWAQVATAPSRLFKAFTTEGGIRVPALLHYPQLPLKGQISHGFGTVMDITPTILDLAGV CCHHHHHHHHHHHHHHHHCCCCEECCCEECCCCCCCCCCCCCCCCCHHCCHHHHHHHHCC RHPGKQWHGKPVAPLRGKSWLGFLSGETAQVHDEHTVTGWELFGRRAIRQGQWKAVWIPG CCCCHHCCCCCCCCCCCCCEEEEECCCCEEECCCCCCHHHHHHHHHHHHCCCEEEEEECC PVGPATWQLYDLGSDPGEIHDLASSQPQKLEALIEHWQRYVEETGVILSESPFQPD CCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCC >Mature Secondary Structure PQRPNFLVILADDLGFSDIGAFGGEIATPNLDALANNGLRLTDFHTAPTCSPTRSMLLT CCCCCEEEEEECCCCCHHHHHCCCCCCCCCHHHHHCCCEEEEECCCCCCCCCCCCEEEE GTDHHIAGIGTMAETLTPELIGKPGYEGYLNDRVVALPELLREAGYQTLMSGKWHLGLTA CCCCCHHHHHHHHHHHCHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHCCCEEEEEEC ELAPHARGFERSFSLLPGAANHYGFEPTYDEHTPGLLKSTPALYIEDDTFIDELPKDFYS CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEECCHHHHHHHHHHHC SDAFGDKLLQYLKERDQSRPFFAYLPFSAPHWPLQAPADIVEKYRGRYDAGPEVLRLERL CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHH EKLKSLGLIEPDVEPHPLIKLTAQWGALSDEQKRISARAMEVYAAMVERMDWNIGRVVDY HHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LRQQGQLDNTFILFMSDNGAEGALLEAFPKFGPDLVTYLSQHYDNSLDNIGRANSYVWYG HHHCCCCCCEEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHCCHHHHCCCCCCEEEEC PNWAQVATAPSRLFKAFTTEGGIRVPALLHYPQLPLKGQISHGFGTVMDITPTILDLAGV CCHHHHHHHHHHHHHHHHCCCCEECCCEECCCCCCCCCCCCCCCCCHHCCHHHHHHHHCC RHPGKQWHGKPVAPLRGKSWLGFLSGETAQVHDEHTVTGWELFGRRAIRQGQWKAVWIPG CCCCHHCCCCCCCCCCCCCEEEEECCCCEEECCCCCCHHHHHHHHHHHHCCCEEEEEECC PVGPATWQLYDLGSDPGEIHDLASSQPQKLEALIEHWQRYVEETGVILSESPFQPD CCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7744061; 10984043 [H]