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The map label for this gene is oruR [H]

Identifier: 77456434

GI number: 77456434

Start: 244452

End: 245456

Strand: Reverse

Name: oruR [H]

Synonym: Pfl01_0206

Alternate gene names: 77456434

Gene position: 245456-244452 (Counterclockwise)

Preceding gene: 77456436

Following gene: 77456429

Centisome position: 3.81

GC content: 64.58

Gene sequence:

>1005_bases
ATGAAGGAACCGACTTCTCTCGCCAGCTGGACCCGTGCCCTGCGCAAGCAACTCGACGCGCTGGGGCTGGACAGCACTGC
CCTGTGCCAGCAGGCCGGGCTCGATCCGCAATTGATGGACGACCCGAATGCCCGCTATCCGTTGTCCGCGACCACACGCC
TGTGGGAAATCGCGGTGCAGGTCAGCGGCGATCCGGCGATTGGTTTGCGAGTGTCGCGGTTCGTCAGCCCCACGACGTTT
CACGCGTTGGGCTATGCGTTGGTGGCCAGCGGCAGCCTGCGGGAAGTGTTCGAGCGGATCGTGCGTTATCACCAGGTGGT
CAGCGACGCGCTGGAACTGGAGCTGACCCGCACCGAGGACCGCTACCGGTTTCACCTGAAAATCCCGGTCGGCAATCCGG
CACCCGCCTTCGAAGCCATCGACGCGTTTGCCGCGATCTATGTGCGCACCTGCCGCAATCGCCTCGGCCGCGACTACGCG
CCACTGGCGGTGTACCTGCGCCGCCCGGAACCGGCCGATGCGCATCAATGGCACAAGGTGTTCCGCTCGCCGGTGCACTT
TTCCGCCGAAGAAGACCGCATCGAATTCGCCCTCGCCGACTTCGACAGCCACCTCGACGACGCCAACCCGGAACTGGCCG
AGCACAACGAAGCGGTGCTCAAACGCACCCTCGCCCAGCTCAAGCCGCTGACCTGGGAGCGCAAGGTACGCGACGCCATC
GAAGAACAACTGCCCGAAGGCGAACCCAGCGCCGAACGCATCGCCCAGGCCCTGCACTTGAGCCTGCGCAGCCTGCAACG
GCACCTGGCGGACGAGGGTTGTCGCTTCGACACCCTGCTGAATGAAAGCCGCGAGAATCTCGCACTGCTGCACCTGCGCG
ATCCGCAATGCTCGCTGAGCGAGGTCAGTTATCTGTTGGGATTTGCCGACACCAGCAGCTTCAGCCGCGCGTTCAAACGC
TGGACCGGGATGACGCCGGGGCAGTTTCGGGATCAGTTGCGCTGA

Upstream 100 bases:

>100_bases
GCTTCCATCCTCTGGTTATTGATGTTCGTATCCTGCCCCGCGCAGGGTCCGGACGCGGTAGCCGAGAACGCCAACCTGTT
GACCGGAAGCGCCAACCAGC

Downstream 100 bases:

>100_bases
GCGCAAATGGGTCGCTCAACCCTTGGTCAGACTGCGTTCAATCCCGGACTCCCACTGCTCGATCATTGCCGTACCCACCT
CGGCGAATGACTGATGGGTT

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MKEPTSLASWTRALRKQLDALGLDSTALCQQAGLDPQLMDDPNARYPLSATTRLWEIAVQVSGDPAIGLRVSRFVSPTTF
HALGYALVASGSLREVFERIVRYHQVVSDALELELTRTEDRYRFHLKIPVGNPAPAFEAIDAFAAIYVRTCRNRLGRDYA
PLAVYLRRPEPADAHQWHKVFRSPVHFSAEEDRIEFALADFDSHLDDANPELAEHNEAVLKRTLAQLKPLTWERKVRDAI
EEQLPEGEPSAERIAQALHLSLRSLQRHLADEGCRFDTLLNESRENLALLHLRDPQCSLSEVSYLLGFADTSSFSRAFKR
WTGMTPGQFRDQLR

Sequences:

>Translated_334_residues
MKEPTSLASWTRALRKQLDALGLDSTALCQQAGLDPQLMDDPNARYPLSATTRLWEIAVQVSGDPAIGLRVSRFVSPTTF
HALGYALVASGSLREVFERIVRYHQVVSDALELELTRTEDRYRFHLKIPVGNPAPAFEAIDAFAAIYVRTCRNRLGRDYA
PLAVYLRRPEPADAHQWHKVFRSPVHFSAEEDRIEFALADFDSHLDDANPELAEHNEAVLKRTLAQLKPLTWERKVRDAI
EEQLPEGEPSAERIAQALHLSLRSLQRHLADEGCRFDTLLNESRENLALLHLRDPQCSLSEVSYLLGFADTSSFSRAFKR
WTGMTPGQFRDQLR
>Mature_334_residues
MKEPTSLASWTRALRKQLDALGLDSTALCQQAGLDPQLMDDPNARYPLSATTRLWEIAVQVSGDPAIGLRVSRFVSPTTF
HALGYALVASGSLREVFERIVRYHQVVSDALELELTRTEDRYRFHLKIPVGNPAPAFEAIDAFAAIYVRTCRNRLGRDYA
PLAVYLRRPEPADAHQWHKVFRSPVHFSAEEDRIEFALADFDSHLDDANPELAEHNEAVLKRTLAQLKPLTWERKVRDAI
EEQLPEGEPSAERIAQALHLSLRSLQRHLADEGCRFDTLLNESRENLALLHLRDPQCSLSEVSYLLGFADTSSFSRAFKR
WTGMTPGQFRDQLR

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 37900; Mature: 37900

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEPTSLASWTRALRKQLDALGLDSTALCQQAGLDPQLMDDPNARYPLSATTRLWEIAVQ
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHEEEEEEE
VSGDPAIGLRVSRFVSPTTFHALGYALVASGSLREVFERIVRYHQVVSDALELELTRTED
ECCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCC
RYRFHLKIPVGNPAPAFEAIDAFAAIYVRTCRNRLGRDYAPLAVYLRRPEPADAHQWHKV
EEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHH
FRSPVHFSAEEDRIEFALADFDSHLDDANPELAEHNEAVLKRTLAQLKPLTWERKVRDAI
HCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
EEQLPEGEPSAERIAQALHLSLRSLQRHLADEGCRFDTLLNESRENLALLHLRDPQCSLS
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEECCCCCCHH
EVSYLLGFADTSSFSRAFKRWTGMTPGQFRDQLR
HHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHCCC
>Mature Secondary Structure
MKEPTSLASWTRALRKQLDALGLDSTALCQQAGLDPQLMDDPNARYPLSATTRLWEIAVQ
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHEEEEEEE
VSGDPAIGLRVSRFVSPTTFHALGYALVASGSLREVFERIVRYHQVVSDALELELTRTED
ECCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCC
RYRFHLKIPVGNPAPAFEAIDAFAAIYVRTCRNRLGRDYAPLAVYLRRPEPADAHQWHKV
EEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHH
FRSPVHFSAEEDRIEFALADFDSHLDDANPELAEHNEAVLKRTLAQLKPLTWERKVRDAI
HCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
EEQLPEGEPSAERIAQALHLSLRSLQRHLADEGCRFDTLLNESRENLALLHLRDPQCSLS
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEECCCCCCHH
EVSYLLGFADTSSFSRAFKRWTGMTPGQFRDQLR
HHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]