| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is cysW [H]
Identifier: 77456424
GI number: 77456424
Start: 236409
End: 237281
Strand: Direct
Name: cysW [H]
Synonym: Pfl01_0196
Alternate gene names: 77456424
Gene position: 236409-237281 (Clockwise)
Preceding gene: 77456423
Following gene: 77456425
Centisome position: 3.67
GC content: 62.2
Gene sequence:
>873_bases ATGTCCCAATCGTCTATTGCGGCCGCGTCCTCGGCCAACGCCGCCCGCCGTGGCAGCGCCACTTCGCGGCGGATCCTGAT CGGCCTCGGCTGGCTGATTTTCTTTCTGTTTCTGCTGCTGCCGCTGTTCATCGTGGTGTCGCAGGGATTGAAGAATGGTC TCGGCGCGTTCTTCACCGCGATCTTTGAACCGGATGCCTTGTCGGCGCTGAAACTCACCGTGATTGCGGTGCTGGTGTCG GTGCCGCTGAACCTGGTGTTCGGTGTCAGCGCCGCGTGGTGCGTGAGCAAATACTCGTTCCGCGGCAAGAGTATGCTGGT GACGCTGATCGACCTGCCGTTCTCGGTGTCGCCGGTGATCGCCGGTCTGGTCTACGTGTTGATGTTCGGTGCCCAGGGCC TGTTCGGGCCGTGGCTGCAGGATCATGACATCCAGATCGTCTTCGCCCTGCCGGGCATCGTGCTGGCGACGATCTTCGTC ACCGTGCCATTCGTGGCCCGTGAGCTGATCCCGCTGATGCAGGAACAAGGCACTCAGGAAGAGGAAGCCGCGCGCCTGCT CGGCGCCAATGGCTGGCAGATGTTCTGGCACGTGACCGTCCCCAACATCAAATGGGGTCTGATCTATGGCGTGGTGCTGT GTACCGCGCGGGCCATGGGTGAGTTCGGTGCGGTGTCGGTGGTTTCCGGGCACATTCGCGGGGTGACCAACACCTTGCCG CTGCACGTCGAGATCCTCTACAACGAATACAACCACGTGGCCGCGTTCGCCGTGGCGAGCCTGTTGCTGATCCTGGCGCT CTTCATCCTGCTGCTCAAGCAGTGGAGCGAAAACCGTATCAACCGCCTGCGCGCCAGCGCCGCGGAGGAATAA
Upstream 100 bases:
>100_bases ACCTCCATCGGCGTATTGATGCTGGTGGTTTCCTTCGTCCTGTTGCTGCTGATCAACTTGCTGCAGCGGCGCATCGAAAC CCCATAAGGAGGCGCGAACC
Downstream 100 bases:
>100_bases TTCATGTCGATCGAAGTGCGTAACGTCAGCAAGAATTTCAATGCGTTCAAGGCGCTGGACAACATCAGTCTGGACATCCA CAGCGGTGAACTGGTGGCAT
Product: Sulfate ABC transporter, permease CysW
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MSQSSIAAASSANAARRGSATSRRILIGLGWLIFFLFLLLPLFIVVSQGLKNGLGAFFTAIFEPDALSALKLTVIAVLVS VPLNLVFGVSAAWCVSKYSFRGKSMLVTLIDLPFSVSPVIAGLVYVLMFGAQGLFGPWLQDHDIQIVFALPGIVLATIFV TVPFVARELIPLMQEQGTQEEEAARLLGANGWQMFWHVTVPNIKWGLIYGVVLCTARAMGEFGAVSVVSGHIRGVTNTLP LHVEILYNEYNHVAAFAVASLLLILALFILLLKQWSENRINRLRASAAEE
Sequences:
>Translated_290_residues MSQSSIAAASSANAARRGSATSRRILIGLGWLIFFLFLLLPLFIVVSQGLKNGLGAFFTAIFEPDALSALKLTVIAVLVS VPLNLVFGVSAAWCVSKYSFRGKSMLVTLIDLPFSVSPVIAGLVYVLMFGAQGLFGPWLQDHDIQIVFALPGIVLATIFV TVPFVARELIPLMQEQGTQEEEAARLLGANGWQMFWHVTVPNIKWGLIYGVVLCTARAMGEFGAVSVVSGHIRGVTNTLP LHVEILYNEYNHVAAFAVASLLLILALFILLLKQWSENRINRLRASAAEE >Mature_289_residues SQSSIAAASSANAARRGSATSRRILIGLGWLIFFLFLLLPLFIVVSQGLKNGLGAFFTAIFEPDALSALKLTVIAVLVSV PLNLVFGVSAAWCVSKYSFRGKSMLVTLIDLPFSVSPVIAGLVYVLMFGAQGLFGPWLQDHDIQIVFALPGIVLATIFVT VPFVARELIPLMQEQGTQEEEAARLLGANGWQMFWHVTVPNIKWGLIYGVVLCTARAMGEFGAVSVVSGHIRGVTNTLPL HVEILYNEYNHVAAFAVASLLLILALFILLLKQWSENRINRLRASAAEE
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4208
COG function: function code P; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=269, Percent_Identity=52.4163568773234, Blast_Score=282, Evalue=2e-77, Organism=Escherichia coli, GI1788764, Length=206, Percent_Identity=36.4077669902913, Blast_Score=151, Evalue=4e-38, Organism=Escherichia coli, GI1786980, Length=221, Percent_Identity=33.9366515837104, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1787369, Length=271, Percent_Identity=26.9372693726937, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011866 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31515; Mature: 31383
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSSIAAASSANAARRGSATSRRILIGLGWLIFFLFLLLPLFIVVSQGLKNGLGAFFTA CCCCHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFEPDALSALKLTVIAVLVSVPLNLVFGVSAAWCVSKYSFRGKSMLVTLIDLPFSVSPVI HCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHH AGLVYVLMFGAQGLFGPWLQDHDIQIVFALPGIVLATIFVTVPFVARELIPLMQEQGTQE HHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH EEAARLLGANGWQMFWHVTVPNIKWGLIYGVVLCTARAMGEFGAVSVVSGHIRGVTNTLP HHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCC LHVEILYNEYNHVAAFAVASLLLILALFILLLKQWSENRINRLRASAAEE EEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SQSSIAAASSANAARRGSATSRRILIGLGWLIFFLFLLLPLFIVVSQGLKNGLGAFFTA CCCHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFEPDALSALKLTVIAVLVSVPLNLVFGVSAAWCVSKYSFRGKSMLVTLIDLPFSVSPVI HCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHH AGLVYVLMFGAQGLFGPWLQDHDIQIVFALPGIVLATIFVTVPFVARELIPLMQEQGTQE HHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH EEAARLLGANGWQMFWHVTVPNIKWGLIYGVVLCTARAMGEFGAVSVVSGHIRGVTNTLP HHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCC LHVEILYNEYNHVAAFAVASLLLILALFILLLKQWSENRINRLRASAAEE EEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]