| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is cysU [H]
Identifier: 77456423
GI number: 77456423
Start: 235577
End: 236395
Strand: Direct
Name: cysU [H]
Synonym: Pfl01_0195
Alternate gene names: 77456423
Gene position: 235577-236395 (Clockwise)
Preceding gene: 77456422
Following gene: 77456424
Centisome position: 3.66
GC content: 63.74
Gene sequence:
>819_bases ATGTCGCGTCGTATCTCCCCCGTCATACCCGGCTTCGGGCTGACGCTGGGCTACACCTTGGTGTACCTCAGCCTGATTGT GCTTATCCCGCTGGCGGCGATGTTCGTCCACGCCGCCCAACTCACCTGGGATCAGTTCTGGACGATCATCTCCGCGCCCC GCGTCCTCGCCGCACTGAAGCTGAGCTTCGGCACCGCGCTGTGCGCCGCGATCATCAACGGCATCATCGGCACGCTGCTG GCGTGGGTGCTGGTGCGTTACACGTTCCCGGGGCGCAAGGTGATCGACGCGATGATCGATCTGCCGTTCGCCCTGCCGAC CGCGGTGGCCGGTATTGCCCTGACGGCGCTGTACACGCCGACCGGGCTGGTCGGGCAGTTCGCCGCTGACCTCGGTTTCA AGATCGCCTACACCCCGCTCGGGATCACGTTGGCGCTGACCTTCGTGACCCTGCCGTTCGTGGTGCGCACGGTACAGCCG GTGCTGGCCGACATCCCGCGTGAAGTCGAAGAAGCGGCCGCGTGCCTGGGTGCCAAACCGTTGCAGGTGTTCCGCCACAT CCTGCTGCCGGCGCTGTTGCCGGCCTGGTTGACCGGTTTTGCCCTGGCGTTTGCCCGGGGCGTCGGCGAGTACGGTTCGG TGATTTTCATCGCCGGCAACATGCCGATGAAAACCGAGATCCTGCCGCTGCTGATCATGGTCAAGCTCGACCAGTACGAT TACACCGGCGCTACCTCCATCGGCGTATTGATGCTGGTGGTTTCCTTCGTCCTGTTGCTGCTGATCAACTTGCTGCAGCG GCGCATCGAAACCCCATAA
Upstream 100 bases:
>100_bases GTGTTCGACCAGATCTATCAGGCGCAGTAAGTTTCAATAGCCTAAAACGAGCCCCGGATTTATGTTCGGGGCTTTGTGCG TTCTCAAACCAAGGACTTTT
Downstream 100 bases:
>100_bases GGAGGCGCGAACCATGTCCCAATCGTCTATTGCGGCCGCGTCCTCGGCCAACGCCGCCCGCCGTGGCAGCGCCACTTCGC GGCGGATCCTGATCGGCCTC
Product: Sulfate ABC transporter, permease CysT
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MSRRISPVIPGFGLTLGYTLVYLSLIVLIPLAAMFVHAAQLTWDQFWTIISAPRVLAALKLSFGTALCAAIINGIIGTLL AWVLVRYTFPGRKVIDAMIDLPFALPTAVAGIALTALYTPTGLVGQFAADLGFKIAYTPLGITLALTFVTLPFVVRTVQP VLADIPREVEEAAACLGAKPLQVFRHILLPALLPAWLTGFALAFARGVGEYGSVIFIAGNMPMKTEILPLLIMVKLDQYD YTGATSIGVLMLVVSFVLLLLINLLQRRIETP
Sequences:
>Translated_272_residues MSRRISPVIPGFGLTLGYTLVYLSLIVLIPLAAMFVHAAQLTWDQFWTIISAPRVLAALKLSFGTALCAAIINGIIGTLL AWVLVRYTFPGRKVIDAMIDLPFALPTAVAGIALTALYTPTGLVGQFAADLGFKIAYTPLGITLALTFVTLPFVVRTVQP VLADIPREVEEAAACLGAKPLQVFRHILLPALLPAWLTGFALAFARGVGEYGSVIFIAGNMPMKTEILPLLIMVKLDQYD YTGATSIGVLMLVVSFVLLLLINLLQRRIETP >Mature_271_residues SRRISPVIPGFGLTLGYTLVYLSLIVLIPLAAMFVHAAQLTWDQFWTIISAPRVLAALKLSFGTALCAAIINGIIGTLLA WVLVRYTFPGRKVIDAMIDLPFALPTAVAGIALTALYTPTGLVGQFAADLGFKIAYTPLGITLALTFVTLPFVVRTVQPV LADIPREVEEAAACLGAKPLQVFRHILLPALLPAWLTGFALAFARGVGEYGSVIFIAGNMPMKTEILPLLIMVKLDQYDY TGATSIGVLMLVVSFVLLLLINLLQRRIETP
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0555
COG function: function code O; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=267, Percent_Identity=49.438202247191, Blast_Score=243, Evalue=1e-65, Organism=Escherichia coli, GI87082099, Length=265, Percent_Identity=32.4528301886792, Blast_Score=138, Evalue=4e-34, Organism=Escherichia coli, GI1786980, Length=194, Percent_Identity=34.020618556701, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI1786254, Length=272, Percent_Identity=26.4705882352941, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1787368, Length=236, Percent_Identity=30.0847457627119, Blast_Score=64, Evalue=7e-12, Organism=Escherichia coli, GI1787081, Length=227, Percent_Identity=32.5991189427313, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011865 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29337; Mature: 29206
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRISPVIPGFGLTLGYTLVYLSLIVLIPLAAMFVHAAQLTWDQFWTIISAPRVLAALK CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSFGTALCAAIINGIIGTLLAWVLVRYTFPGRKVIDAMIDLPFALPTAVAGIALTALYTP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCC TGLVGQFAADLGFKIAYTPLGITLALTFVTLPFVVRTVQPVLADIPREVEEAAACLGAKP CHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH LQVFRHILLPALLPAWLTGFALAFARGVGEYGSVIFIAGNMPMKTEILPLLIMVKLDQYD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCC YTGATSIGVLMLVVSFVLLLLINLLQRRIETP CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SRRISPVIPGFGLTLGYTLVYLSLIVLIPLAAMFVHAAQLTWDQFWTIISAPRVLAALK CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSFGTALCAAIINGIIGTLLAWVLVRYTFPGRKVIDAMIDLPFALPTAVAGIALTALYTP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCC TGLVGQFAADLGFKIAYTPLGITLALTFVTLPFVVRTVQPVLADIPREVEEAAACLGAKP CHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH LQVFRHILLPALLPAWLTGFALAFARGVGEYGSVIFIAGNMPMKTEILPLLIMVKLDQYD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCC YTGATSIGVLMLVVSFVLLLLINLLQRRIETP CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2188958; 9205837; 9278503; 2188959 [H]