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The map label for this gene is ydgA [H]

Identifier: 77456404

GI number: 77456404

Start: 211087

End: 212592

Strand: Direct

Name: ydgA [H]

Synonym: Pfl01_0176

Alternate gene names: 77456404

Gene position: 211087-212592 (Clockwise)

Preceding gene: 77456403

Following gene: 77456405

Centisome position: 3.28

GC content: 59.96

Gene sequence:

>1506_bases
ATGAATAAATCAGCAGGCGTGCTTCTCGGAATTGTTGTGGCCATTGGCGCCATCAGCGTAGGCGGGGCCTGGTACACCGG
CACCAAAATCGAAGGCGTGCTGAACAACGCCGTCGCCAATGCCAACAGCGAGTTGCAGACCGCCATGGCCGGCTCCAACG
GCAGTGCATCGCTGGAGCTGGTGTCGCTGGAGCGCAACACCTTCAGCAGCACCGCGCACTATCGCCTCAAGGGCGAGGGT
GAAATGTTCGGCGAAGCGCCGGTCGAGCTGCTGTTCGTCGACCACATCGAACACGGCCCGCTGCCGTTCTCGCGTCTGGT
GTCGCTGAAATGGCTGCCGGTCATGGCCACCAGTCACTTCGAACTGGAAAAGACCCCAATCACCGAAAAATGGTTTGCCG
CCACCAAGGGCGCGGCGCCGCTCAAAGGTGTGGTCAATATCGGCTACGACCAGTCCACCACCGGCAACCTCGAACTGCTG
CCACTGGAAACCGCGCTGGATGACAAGTCGAACCTGAAGTTTTCCGGCTTGAACATGGATATTTCCGCCAGCGCCCAGGC
CCAGAAGGTCAAAGCCAACGGTTACATGGACAGCCTGCACCTGAGCACGGTCGCCGAAGACCAGACGCCGGTGCAGATCG
AACTCAATGGCCTGACCCTGGCCAGCAATCTCGCCAAAAGCACCTACGGCTACTACACCGGCGAGAACACCCTGGAACTG
ACCAGCAGCAAGACCACCTTCGGCGCCAAGCAGTCGGTGCTGGGTGTGAAGAACTTCGAAATGAAGAACCGTACCGAAGA
GAACGGCAGCAACGCCTCCGGCCGTGCCGACTACAAGGTCGCTGAAGTAACCCTCAACGACAAGAAGATCGGTTCGGCCA
ACCTGGCCATGAGCCTGAAAAACCTCGACATTCCGTCGGCGATGTCGCTGATGCAGATCTACCAGACCAAGCTGCAGCCT
TACGAAAAAGCCGCTGCCGAAGCCACCGCCGCCGGCCTGCCGGCACCGGAGCTGAACCTGACCGAGGCCGAGTCGACCCA
GGTCAAGGCCGACCTGCAGAAACTGCTGGCGGCCGGGCCGCAACTGGCGCTGGAAGACCTGTCGCTGAAAACCGCCAACG
GCGAAAGCCGGGCGAATCTGGTGCTTGATCTGACCAAGCCTGCGTCGATGGACCTGCCACCGGATCAACTGGGCAAACAG
TTGATCGCGCTGCTGGACATCAATGTGTTGGTGTCCAAGCCGATGCTGGTCGACCTGCTCAGCGTGCAGGCGCAAATCGA
TGGCCAGACCGATGCCAAGGCCATCGTTGACCAGGCCAGCGCTGGCGCTGACATGTTCGCCGGCATGGCCGTTGGTTCGC
AGTTGGCGACACTGGATGGCACCAACGTTGTCACCAAGCTGCATTACGCCGCCAATCAGGTTGAATTCAACGGCCAGAAG
ATGACCGTCGAGCAGTTCGTGGGCTTCCTGATGAGCAAGTTCGGCAGTATCGAACAGCCTCAGTAA

Upstream 100 bases:

>100_bases
TAATCTCCACCGCTAAATTCAGCGGAGTCGCGCCACGGCCCGGTCACGGGTTCAGGGAAGACGACCACACTTTCAGCCAC
GGAAATCGATCAGGTCATTC

Downstream 100 bases:

>100_bases
ACGCCCCACGCGTCACCGAAACGCCCGGCCTCTGCACCCGCAGACGCCGGGCGTTTTGCTTTCTGGCATCCGGGTTAACG
GTTAGCCGGGGCCAGCCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 501

Protein sequence:

>501_residues
MNKSAGVLLGIVVAIGAISVGGAWYTGTKIEGVLNNAVANANSELQTAMAGSNGSASLELVSLERNTFSSTAHYRLKGEG
EMFGEAPVELLFVDHIEHGPLPFSRLVSLKWLPVMATSHFELEKTPITEKWFAATKGAAPLKGVVNIGYDQSTTGNLELL
PLETALDDKSNLKFSGLNMDISASAQAQKVKANGYMDSLHLSTVAEDQTPVQIELNGLTLASNLAKSTYGYYTGENTLEL
TSSKTTFGAKQSVLGVKNFEMKNRTEENGSNASGRADYKVAEVTLNDKKIGSANLAMSLKNLDIPSAMSLMQIYQTKLQP
YEKAAAEATAAGLPAPELNLTEAESTQVKADLQKLLAAGPQLALEDLSLKTANGESRANLVLDLTKPASMDLPPDQLGKQ
LIALLDINVLVSKPMLVDLLSVQAQIDGQTDAKAIVDQASAGADMFAGMAVGSQLATLDGTNVVTKLHYAANQVEFNGQK
MTVEQFVGFLMSKFGSIEQPQ

Sequences:

>Translated_501_residues
MNKSAGVLLGIVVAIGAISVGGAWYTGTKIEGVLNNAVANANSELQTAMAGSNGSASLELVSLERNTFSSTAHYRLKGEG
EMFGEAPVELLFVDHIEHGPLPFSRLVSLKWLPVMATSHFELEKTPITEKWFAATKGAAPLKGVVNIGYDQSTTGNLELL
PLETALDDKSNLKFSGLNMDISASAQAQKVKANGYMDSLHLSTVAEDQTPVQIELNGLTLASNLAKSTYGYYTGENTLEL
TSSKTTFGAKQSVLGVKNFEMKNRTEENGSNASGRADYKVAEVTLNDKKIGSANLAMSLKNLDIPSAMSLMQIYQTKLQP
YEKAAAEATAAGLPAPELNLTEAESTQVKADLQKLLAAGPQLALEDLSLKTANGESRANLVLDLTKPASMDLPPDQLGKQ
LIALLDINVLVSKPMLVDLLSVQAQIDGQTDAKAIVDQASAGADMFAGMAVGSQLATLDGTNVVTKLHYAANQVEFNGQK
MTVEQFVGFLMSKFGSIEQPQ
>Mature_501_residues
MNKSAGVLLGIVVAIGAISVGGAWYTGTKIEGVLNNAVANANSELQTAMAGSNGSASLELVSLERNTFSSTAHYRLKGEG
EMFGEAPVELLFVDHIEHGPLPFSRLVSLKWLPVMATSHFELEKTPITEKWFAATKGAAPLKGVVNIGYDQSTTGNLELL
PLETALDDKSNLKFSGLNMDISASAQAQKVKANGYMDSLHLSTVAEDQTPVQIELNGLTLASNLAKSTYGYYTGENTLEL
TSSKTTFGAKQSVLGVKNFEMKNRTEENGSNASGRADYKVAEVTLNDKKIGSANLAMSLKNLDIPSAMSLMQIYQTKLQP
YEKAAAEATAAGLPAPELNLTEAESTQVKADLQKLLAAGPQLALEDLSLKTANGESRANLVLDLTKPASMDLPPDQLGKQ
LIALLDINVLVSKPMLVDLLSVQAQIDGQTDAKAIVDQASAGADMFAGMAVGSQLATLDGTNVVTKLHYAANQVEFNGQK
MTVEQFVGFLMSKFGSIEQPQ

Specific function: Unknown

COG id: COG5339

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Periplasmic side. Note=Has been isolated in association with the inner membrane, suggesting it may be tethered to the membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yihF and H.influenzae HI_1236 [H]

Homologues:

Organism=Escherichia coli, GI1787900, Length=504, Percent_Identity=27.7777777777778, Blast_Score=167, Evalue=2e-42,
Organism=Escherichia coli, GI87082339, Length=502, Percent_Identity=22.9083665338645, Blast_Score=82, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010352 [H]

Pfam domain/function: PF06097 DUF945 [H]

EC number: NA

Molecular weight: Translated: 53222; Mature: 53222

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSAGVLLGIVVAIGAISVGGAWYTGTKIEGVLNNAVANANSELQTAMAGSNGSASLEL
CCCCHHHHHHHHHHHHHHEECCEEEECCCHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEE
VSLERNTFSSTAHYRLKGEGEMFGEAPVELLFVDHIEHGPLPFSRLVSLKWLPVMATSHF
EEECCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCHHHHHEEEEEEEEECCCE
ELEKTPITEKWFAATKGAAPLKGVVNIGYDQSTTGNLELLPLETALDDKSNLKFSGLNMD
EECCCCCCHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEEEEHHHCCCCCCCEEECCCEE
ISASAQAQKVKANGYMDSLHLSTVAEDQTPVQIELNGLTLASNLAKSTYGYYTGENTLEL
ECCCCCHHEEECCCCEEHEEEEEECCCCCCEEEEECCEEEHHHHHHHHCCEECCCCEEEE
TSSKTTFGAKQSVLGVKNFEMKNRTEENGSNASGRADYKVAEVTLNDKKIGSANLAMSLK
ECCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEE
NLDIPSAMSLMQIYQTKLQPYEKAAAEATAAGLPAPELNLTEAESTQVKADLQKLLAAGP
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
QLALEDLSLKTANGESRANLVLDLTKPASMDLPPDQLGKQLIALLDINVLVSKPMLVDLL
CEEEECCEEEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH
SVQAQIDGQTDAKAIVDQASAGADMFAGMAVGSQLATLDGTNVVTKLHYAANQVEFNGQK
HHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHCCEEEECCCCHHHEEEEHHHCEEEECCCE
MTVEQFVGFLMSKFGSIEQPQ
EEHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNKSAGVLLGIVVAIGAISVGGAWYTGTKIEGVLNNAVANANSELQTAMAGSNGSASLEL
CCCCHHHHHHHHHHHHHHEECCEEEECCCHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEE
VSLERNTFSSTAHYRLKGEGEMFGEAPVELLFVDHIEHGPLPFSRLVSLKWLPVMATSHF
EEECCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCHHHHHEEEEEEEEECCCE
ELEKTPITEKWFAATKGAAPLKGVVNIGYDQSTTGNLELLPLETALDDKSNLKFSGLNMD
EECCCCCCHHHHHHCCCCCCCCEEEECCCCCCCCCCEEEEEEHHHCCCCCCCEEECCCEE
ISASAQAQKVKANGYMDSLHLSTVAEDQTPVQIELNGLTLASNLAKSTYGYYTGENTLEL
ECCCCCHHEEECCCCEEHEEEEEECCCCCCEEEEECCEEEHHHHHHHHCCEECCCCEEEE
TSSKTTFGAKQSVLGVKNFEMKNRTEENGSNASGRADYKVAEVTLNDKKIGSANLAMSLK
ECCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEE
NLDIPSAMSLMQIYQTKLQPYEKAAAEATAAGLPAPELNLTEAESTQVKADLQKLLAAGP
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
QLALEDLSLKTANGESRANLVLDLTKPASMDLPPDQLGKQLIALLDINVLVSKPMLVDLL
CEEEECCEEEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH
SVQAQIDGQTDAKAIVDQASAGADMFAGMAVGSQLATLDGTNVVTKLHYAANQVEFNGQK
HHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHCCEEEECCCCHHHEEEEHHHCEEEECCCE
MTVEQFVGFLMSKFGSIEQPQ
EEHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]