| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is cysC [H]
Identifier: 77456390
GI number: 77456390
Start: 200315
End: 200899
Strand: Direct
Name: cysC [H]
Synonym: Pfl01_0162
Alternate gene names: 77456390
Gene position: 200315-200899 (Clockwise)
Preceding gene: 77456389
Following gene: 77456391
Centisome position: 3.11
GC content: 67.01
Gene sequence:
>585_bases TTGGCGCCGACCGCCAGCATCAGCCGTGCCCAACGCGAGGCCCGCAACGGCCATCGCGGCACGGCAATGCTGCTGACCGG CTTGCCGGCGGCGGGCAAATCGACCCTTGCCCAGGCGTTGCATGCCGAGTTGTTCAGTCGTGGTCTGCAAAGTGTGGTGC TCGATGGCGATGGCCTGCGCGTCGGGCTCAACCGTGACCTGGGTTTTACCGATGCCGACCGCCTGGAAAACATCCGCCGC GCCAGTGAGCTGGCGGCGTTGCTGGTGGAGAACGGGCAGATCGTGATTCTGGCGATGATCGCGCCGTTGGCGGAACTGCG CGAAGTGTTTGCCCGCCGTTTGGGCGAGGACTATCGCGAGGTCTGGTGCAGCGCCGCGCTGGCAGTGTGCGAGCAGCGCG ATCCGAAAGGGCATTACGCCCGGGCCCGGCGTGGCGAGCTGGCCGGGTTTACCGGCGTGTCAGCACCTTACGAGGCACCG GCCCAGGCTTCGCTGGTGCTCGACACCGGCACGCTGACGGTCGAAGCCTGTCTCGACCGGTTGCTGACCTGGCTCGGCGA ATCCGCGGTGTTGCCCAAGGCATGA
Upstream 100 bases:
>100_bases GAGGTCCAGTCGATCGCCACCGCGCTGGCCAACCGCGAAGCCGCGTGGGCCTCGGGGGATATTTCGCTGCCGGTGGCCCA TGCCGCCGCGCAGTGACGTA
Downstream 100 bases:
>100_bases GCCGGCCGGCGTTCTCACGGTTGCCGCTGACCGCGGATCTGCCATTGCTGTTGCAGGCGCTGGCGTCAATTGACGACGCT GCCTGGCGCGGTCATTTCAA
Product: adenylylsulfate kinase
Products: NA
Alternate protein names: APS kinase; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; Adenosine-5'-phosphosulfate kinase [H]
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MAPTASISRAQREARNGHRGTAMLLTGLPAAGKSTLAQALHAELFSRGLQSVVLDGDGLRVGLNRDLGFTDADRLENIRR ASELAALLVENGQIVILAMIAPLAELREVFARRLGEDYREVWCSAALAVCEQRDPKGHYARARRGELAGFTGVSAPYEAP AQASLVLDTGTLTVEACLDRLLTWLGESAVLPKA
Sequences:
>Translated_194_residues MAPTASISRAQREARNGHRGTAMLLTGLPAAGKSTLAQALHAELFSRGLQSVVLDGDGLRVGLNRDLGFTDADRLENIRR ASELAALLVENGQIVILAMIAPLAELREVFARRLGEDYREVWCSAALAVCEQRDPKGHYARARRGELAGFTGVSAPYEAP AQASLVLDTGTLTVEACLDRLLTWLGESAVLPKA >Mature_193_residues APTASISRAQREARNGHRGTAMLLTGLPAAGKSTLAQALHAELFSRGLQSVVLDGDGLRVGLNRDLGFTDADRLENIRRA SELAALLVENGQIVILAMIAPLAELREVFARRLGEDYREVWCSAALAVCEQRDPKGHYARARRGELAGFTGVSAPYEAPA QASLVLDTGTLTVEACLDRLLTWLGESAVLPKA
Specific function: Catalyzes the synthesis of activated sulfate [H]
COG id: COG0529
COG function: function code P; Adenylylsulfate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the APS kinase family [H]
Homologues:
Organism=Homo sapiens, GI34447231, Length=194, Percent_Identity=42.2680412371134, Blast_Score=147, Evalue=6e-36, Organism=Homo sapiens, GI62912492, Length=194, Percent_Identity=42.2680412371134, Blast_Score=146, Evalue=9e-36, Organism=Homo sapiens, GI46094058, Length=194, Percent_Identity=41.2371134020619, Blast_Score=145, Evalue=2e-35, Organism=Escherichia coli, GI1789107, Length=186, Percent_Identity=45.1612903225806, Blast_Score=155, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17542422, Length=196, Percent_Identity=41.8367346938776, Blast_Score=149, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6322852, Length=192, Percent_Identity=42.1875, Blast_Score=144, Evalue=1e-35, Organism=Drosophila melanogaster, GI24667032, Length=182, Percent_Identity=42.8571428571429, Blast_Score=154, Evalue=3e-38, Organism=Drosophila melanogaster, GI24667028, Length=182, Percent_Identity=42.8571428571429, Blast_Score=154, Evalue=3e-38, Organism=Drosophila melanogaster, GI24667036, Length=182, Percent_Identity=42.8571428571429, Blast_Score=154, Evalue=3e-38, Organism=Drosophila melanogaster, GI116007838, Length=182, Percent_Identity=42.8571428571429, Blast_Score=154, Evalue=3e-38, Organism=Drosophila melanogaster, GI24667044, Length=182, Percent_Identity=42.8571428571429, Blast_Score=154, Evalue=3e-38, Organism=Drosophila melanogaster, GI24667040, Length=182, Percent_Identity=42.8571428571429, Blast_Score=154, Evalue=4e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002891 [H]
Pfam domain/function: PF01583 APS_kinase [H]
EC number: =2.7.1.25 [H]
Molecular weight: Translated: 20776; Mature: 20645
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPTASISRAQREARNGHRGTAMLLTGLPAAGKSTLAQALHAELFSRGLQSVVLDGDGLR CCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCEE VGLNRDLGFTDADRLENIRRASELAALLVENGQIVILAMIAPLAELREVFARRLGEDYRE EECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCHHHHH VWCSAALAVCEQRDPKGHYARARRGELAGFTGVSAPYEAPAQASLVLDTGTLTVEACLDR HHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEHHHHHHH LLTWLGESAVLPKA HHHHHCCCCCCCCC >Mature Secondary Structure APTASISRAQREARNGHRGTAMLLTGLPAAGKSTLAQALHAELFSRGLQSVVLDGDGLR CCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCEE VGLNRDLGFTDADRLENIRRASELAALLVENGQIVILAMIAPLAELREVFARRLGEDYRE EECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCHHHHH VWCSAALAVCEQRDPKGHYARARRGELAGFTGVSAPYEAPAQASLVLDTGTLTVEACLDR HHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEHHHHHHH LLTWLGESAVLPKA HHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA