| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456391
Identifier: 77456391
GI number: 77456391
Start: 200896
End: 201681
Strand: Direct
Name: 77456391
Synonym: Pfl01_0163
Alternate gene names: NA
Gene position: 200896-201681 (Clockwise)
Preceding gene: 77456390
Following gene: 77456392
Centisome position: 3.12
GC content: 63.1
Gene sequence:
>786_bases ATGAGCCGGCCGGCGTTCTCACGGTTGCCGCTGACCGCGGATCTGCCATTGCTGTTGCAGGCGCTGGCGTCAATTGACGA CGCTGCCTGGCGCGGTCATTTCAACACCGCTTATTTCGCTGGCGACTGGAGCGGTGTGGCGCTGATTTCCGCCGCCGACG CGCTGACCGAACTGTCCCCCGGCAGTGCCGAACCCATTCAACGCCCCCCTTGGCTGAATGACCGTCGCTGGCAGCAGGCC CTGCGGGATCTGCCGCTGGAAATCGTCAGTGCTCGGCTCTTGCGACTGGGACCGGGCGGACAGATTCATGAACATCGCGA CTACGACCTTGAGGGCGCGGACGCCGATTTGCGCCTGCATATTCCGCTGCTCAGTCCTCCTGCGGTGGACTTCTGGCTCG ACGGCCAGCGGATGCCGATGAGGGCCGGGGAATGCTGGTTTCTTGATCTTGCCCGGCCGCATCGGGTCGACAATCGCGAC CGCACGGCACGGGTTCATCTGGTGCTCGATTGCCGCCCCGCGCCCTGGCTGGAGCAGATGATTGTTGACGGTTTGCCGAG CACTCCGCTGCCTGATGCCACGGAAACAGCGCTTCAGCGCTTTCAACGATTGCTTGTCACAGAACCGCTGTTGTCCGCAA CGTTGCAGGCATTGCACGACCCCGAAGCATTCACTGTCCAGACGCTGGCGTTGGCCGCTGAACGAGGCCTGCATTTTTCC CGTGAAGAGCTGCTGGCGGCGATGCGCAACGGTCGTCGGTCATGGAACGAGCAATGGCGCCTGTGA
Upstream 100 bases:
>100_bases CCCAGGCTTCGCTGGTGCTCGACACCGGCACGCTGACGGTCGAAGCCTGTCTCGACCGGTTGCTGACCTGGCTCGGCGAA TCCGCGGTGTTGCCCAAGGC
Downstream 100 bases:
>100_bases ATTTCGACGGCTGGTTGCCGATCCGCGTCTGGAAAACCGCCGAGCAATGGCAGGTCGACTGGTGCTGGTTTGGTGACACC CCGCTGCATCAACCGTTCTT
Product: aspartyl/asparaginyl beta-hydroxylase
Products: NA
Alternate protein names: Aspartyl/Asparaginyl Beta-Hydroxylase Family; Aspartyl/Asparaginyl Beta-Hydroxylase Family Protein; Beta-Hydroxylase Aspartyl/Asparaginyl Family; SecC Motif-Containing Protein
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MSRPAFSRLPLTADLPLLLQALASIDDAAWRGHFNTAYFAGDWSGVALISAADALTELSPGSAEPIQRPPWLNDRRWQQA LRDLPLEIVSARLLRLGPGGQIHEHRDYDLEGADADLRLHIPLLSPPAVDFWLDGQRMPMRAGECWFLDLARPHRVDNRD RTARVHLVLDCRPAPWLEQMIVDGLPSTPLPDATETALQRFQRLLVTEPLLSATLQALHDPEAFTVQTLALAAERGLHFS REELLAAMRNGRRSWNEQWRL
Sequences:
>Translated_261_residues MSRPAFSRLPLTADLPLLLQALASIDDAAWRGHFNTAYFAGDWSGVALISAADALTELSPGSAEPIQRPPWLNDRRWQQA LRDLPLEIVSARLLRLGPGGQIHEHRDYDLEGADADLRLHIPLLSPPAVDFWLDGQRMPMRAGECWFLDLARPHRVDNRD RTARVHLVLDCRPAPWLEQMIVDGLPSTPLPDATETALQRFQRLLVTEPLLSATLQALHDPEAFTVQTLALAAERGLHFS REELLAAMRNGRRSWNEQWRL >Mature_260_residues SRPAFSRLPLTADLPLLLQALASIDDAAWRGHFNTAYFAGDWSGVALISAADALTELSPGSAEPIQRPPWLNDRRWQQAL RDLPLEIVSARLLRLGPGGQIHEHRDYDLEGADADLRLHIPLLSPPAVDFWLDGQRMPMRAGECWFLDLARPHRVDNRDR TARVHLVLDCRPAPWLEQMIVDGLPSTPLPDATETALQRFQRLLVTEPLLSATLQALHDPEAFTVQTLALAAERGLHFSR EELLAAMRNGRRSWNEQWRL
Specific function: Unknown
COG id: COG3555
COG function: function code O; Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29442; Mature: 29311
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPAFSRLPLTADLPLLLQALASIDDAAWRGHFNTAYFAGDWSGVALISAADALTELSP CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCC GSAEPIQRPPWLNDRRWQQALRDLPLEIVSARLLRLGPGGQIHEHRDYDLEGADADLRLH CCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEE IPLLSPPAVDFWLDGQRMPMRAGECWFLDLARPHRVDNRDRTARVHLVLDCRPAPWLEQM EEECCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEECCCCHHHHHH IVDGLPSTPLPDATETALQRFQRLLVTEPLLSATLQALHDPEAFTVQTLALAAERGLHFS HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC REELLAAMRNGRRSWNEQWRL HHHHHHHHHHHHHCHHHHCCC >Mature Secondary Structure SRPAFSRLPLTADLPLLLQALASIDDAAWRGHFNTAYFAGDWSGVALISAADALTELSP CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCC GSAEPIQRPPWLNDRRWQQALRDLPLEIVSARLLRLGPGGQIHEHRDYDLEGADADLRLH CCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEE IPLLSPPAVDFWLDGQRMPMRAGECWFLDLARPHRVDNRDRTARVHLVLDCRPAPWLEQM EEECCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEECCCCHHHHHH IVDGLPSTPLPDATETALQRFQRLLVTEPLLSATLQALHDPEAFTVQTLALAAERGLHFS HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC REELLAAMRNGRRSWNEQWRL HHHHHHHHHHHHHCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA