| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456356
Identifier: 77456356
GI number: 77456356
Start: 139394
End: 140167
Strand: Reverse
Name: 77456356
Synonym: Pfl01_0128
Alternate gene names: NA
Gene position: 140167-139394 (Counterclockwise)
Preceding gene: 77456357
Following gene: 77456355
Centisome position: 2.18
GC content: 61.24
Gene sequence:
>774_bases ATGCCAACCAAAGAGCAACTTACACTAAAGAAAGCCGAACTCAGCGTTCATCCGATCTTTTCCGAAATCGATTCTTTGGC GACATTGCGCCGGTTCATGGAATCCCATGTATTTGCCGTCTGGGACTTCATGTCACTGACCAAGCGCCTGCAGCAGGAAC TGACTTGCACTCGCCTGCCGTGGTTGCCGCCACGGGATCCGCGCGCGGCACGACTGATCAATGAAATCGTGCTCGGCGAA GAATCGGACGATCGGCTGTCACACGGGCATTACAGTCACTTCGAACTGTACCTCGATGCGATGCGCGAAGTCGGTGCGGA CACGACAGCGGTGGAGCGCTTCGTGACACTGCAACAGGAAGGCGTGAGTTACGACGTCGCCCTGCAAAGCGTCGAGGTTG ATCCAGCGGCGGCGCGATTCGTCCGTGACACCTTGCACACCGCACTGAATGCACCCGGTCACAGCGTTGCCGCCGCATTC CTGCATGGTCGCGAGAGCGTGATCCCGACCATGTTCCAGCGCATGCTCGATGCCTGGGGCATTGGCGTCGAGCAGGCACC GACCTTCCGTTACTACCTGGAGCGACACATCGAGGTCGACTCCGAAGACCACGGCCCGGCCGCCGAGCAACTGCTGGATC GACTGGTGGACGGCGATCCGCAGCGCGAAGCCGAGGTCTACGCCAGCGCCATCGCCGCCGTGGAAAGCCGCATCGCCCTG TGGGACGGTCTGCGCCTGAGCATGCGCGAACCGCTGGCGGAGGTGGCCCAATGA
Upstream 100 bases:
>100_bases GAAACCGAATGAGGCTGTCGTTCGCCTGGAGAAACTTGTTCAACGTTATTAGCAATTGATTGAGCAATCCCTATTCCCTA TTAGCCAGAGTCTCGCAACC
Downstream 100 bases:
>100_bases ACGCCGCCGACTACCAGTCTTTCGCCGACGCCTGGGAAAGCCGCGCGACCATTCGCACCAGACCACGCCGCGTGCTGGAG GGCGACGCGCGGCTGATCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MPTKEQLTLKKAELSVHPIFSEIDSLATLRRFMESHVFAVWDFMSLTKRLQQELTCTRLPWLPPRDPRAARLINEIVLGE ESDDRLSHGHYSHFELYLDAMREVGADTTAVERFVTLQQEGVSYDVALQSVEVDPAAARFVRDTLHTALNAPGHSVAAAF LHGRESVIPTMFQRMLDAWGIGVEQAPTFRYYLERHIEVDSEDHGPAAEQLLDRLVDGDPQREAEVYASAIAAVESRIAL WDGLRLSMREPLAEVAQ
Sequences:
>Translated_257_residues MPTKEQLTLKKAELSVHPIFSEIDSLATLRRFMESHVFAVWDFMSLTKRLQQELTCTRLPWLPPRDPRAARLINEIVLGE ESDDRLSHGHYSHFELYLDAMREVGADTTAVERFVTLQQEGVSYDVALQSVEVDPAAARFVRDTLHTALNAPGHSVAAAF LHGRESVIPTMFQRMLDAWGIGVEQAPTFRYYLERHIEVDSEDHGPAAEQLLDRLVDGDPQREAEVYASAIAAVESRIAL WDGLRLSMREPLAEVAQ >Mature_256_residues PTKEQLTLKKAELSVHPIFSEIDSLATLRRFMESHVFAVWDFMSLTKRLQQELTCTRLPWLPPRDPRAARLINEIVLGEE SDDRLSHGHYSHFELYLDAMREVGADTTAVERFVTLQQEGVSYDVALQSVEVDPAAARFVRDTLHTALNAPGHSVAAAFL HGRESVIPTMFQRMLDAWGIGVEQAPTFRYYLERHIEVDSEDHGPAAEQLLDRLVDGDPQREAEVYASAIAAVESRIALW DGLRLSMREPLAEVAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29034; Mature: 28903
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTKEQLTLKKAELSVHPIFSEIDSLATLRRFMESHVFAVWDFMSLTKRLQQELTCTRLP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC WLPPRDPRAARLINEIVLGEESDDRLSHGHYSHFELYLDAMREVGADTTAVERFVTLQQE CCCCCCCHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC GVSYDVALQSVEVDPAAARFVRDTLHTALNAPGHSVAAAFLHGRESVIPTMFQRMLDAWG CCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHC IGVEQAPTFRYYLERHIEVDSEDHGPAAEQLLDRLVDGDPQREAEVYASAIAAVESRIAL CCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH WDGLRLSMREPLAEVAQ HHCCHHHHHHHHHHHCC >Mature Secondary Structure PTKEQLTLKKAELSVHPIFSEIDSLATLRRFMESHVFAVWDFMSLTKRLQQELTCTRLP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC WLPPRDPRAARLINEIVLGEESDDRLSHGHYSHFELYLDAMREVGADTTAVERFVTLQQE CCCCCCCHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC GVSYDVALQSVEVDPAAARFVRDTLHTALNAPGHSVAAAFLHGRESVIPTMFQRMLDAWG CCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHC IGVEQAPTFRYYLERHIEVDSEDHGPAAEQLLDRLVDGDPQREAEVYASAIAAVESRIAL CCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH WDGLRLSMREPLAEVAQ HHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA