| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456355
Identifier: 77456355
GI number: 77456355
Start: 138468
End: 139397
Strand: Reverse
Name: 77456355
Synonym: Pfl01_0127
Alternate gene names: NA
Gene position: 139397-138468 (Counterclockwise)
Preceding gene: 77456356
Following gene: 77456354
Centisome position: 2.17
GC content: 62.37
Gene sequence:
>930_bases ATGAACGCCGCCGACTACCAGTCTTTCGCCGACGCCTGGGAAAGCCGCGCGACCATTCGCACCAGACCACGCCGCGTGCT GGAGGGCGACGCGCGGCTGATCTATCCGCTCAGCCGCCAGCCGTTGGTGCTCAGCGAAACCTTCCTGCGCGAATGCCCGG AACAGCGTGATTTCGCCTTGGTGCAGACGCTGTACAAATTCATCAACGACGTGGTGATTTTCGAAACCGAGATCGTCGAC AAAACCGCGCGCAGCATCGCCAAGAACCGCTTCGCCGTGGCCTTCCCGTTCGCCTGTCGCTACGACGCCATGACCGTGGT GGTGGACGAGGATTACCACGCGTTGGTAGCGATGGATTTCATGCAGCAGACCGTGGCCATGACCGGCGTCGAGCCGATCG AGCTGCCGAATGAAATCGAACTGAGCCGGGCGATTCCGGCTGCCGTCGAACTGGCCCCGGAGCACCTGCGCAGCGCCGTG GAACTGATCTGCGTCGCCATCGCCGAGAACACCGTGACCGGCGATGTCGCAGCGTTCGCCCGGGACGACACGGTCAAGCC GTCGATCAAGGGCCTGATGGCCGACCACTTGCTCGACGAGGGCCGGCACTCGAATTTCTGGGCGCGGATGGTGCGTATCT ACTGGCATACCGCGAGCGATGCGGATCGCGAATGCATCGCGCAGATCCTGCCGGTGTTCATCGGCCATTACCTGACCAAC GACATCCAGAAGTCCTTCGACCTGCGCCTGATCGATGCCTTGCCGGTCAACGATGCAACGCGTCGAGCGCTGAAGGACGA GATGGCCGGACTGGCCTTCCCGATCAATCGTCATCACCCGCTGGTGGGCAACATCGTGCGCTTTTTCCACAACAGCTCAC TGCTCGACACTCCGTGCGTGCAGCACGCCCTGCGCGACTACCTGGTTTGA
Upstream 100 bases:
>100_bases CCGAGGTCTACGCCAGCGCCATCGCCGCCGTGGAAAGCCGCATCGCCCTGTGGGACGGTCTGCGCCTGAGCATGCGCGAA CCGCTGGCGGAGGTGGCCCA
Downstream 100 bases:
>100_bases CAAGGAGGCTGACATGAGACGTCTCGACATTTTGCTGAGGGGCCGCAGCCAGGCCTTGACCGACCTGGCGCAGGAGCTCG AACAACACGGTCATTCATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MNAADYQSFADAWESRATIRTRPRRVLEGDARLIYPLSRQPLVLSETFLRECPEQRDFALVQTLYKFINDVVIFETEIVD KTARSIAKNRFAVAFPFACRYDAMTVVVDEDYHALVAMDFMQQTVAMTGVEPIELPNEIELSRAIPAAVELAPEHLRSAV ELICVAIAENTVTGDVAAFARDDTVKPSIKGLMADHLLDEGRHSNFWARMVRIYWHTASDADRECIAQILPVFIGHYLTN DIQKSFDLRLIDALPVNDATRRALKDEMAGLAFPINRHHPLVGNIVRFFHNSSLLDTPCVQHALRDYLV
Sequences:
>Translated_309_residues MNAADYQSFADAWESRATIRTRPRRVLEGDARLIYPLSRQPLVLSETFLRECPEQRDFALVQTLYKFINDVVIFETEIVD KTARSIAKNRFAVAFPFACRYDAMTVVVDEDYHALVAMDFMQQTVAMTGVEPIELPNEIELSRAIPAAVELAPEHLRSAV ELICVAIAENTVTGDVAAFARDDTVKPSIKGLMADHLLDEGRHSNFWARMVRIYWHTASDADRECIAQILPVFIGHYLTN DIQKSFDLRLIDALPVNDATRRALKDEMAGLAFPINRHHPLVGNIVRFFHNSSLLDTPCVQHALRDYLV >Mature_309_residues MNAADYQSFADAWESRATIRTRPRRVLEGDARLIYPLSRQPLVLSETFLRECPEQRDFALVQTLYKFINDVVIFETEIVD KTARSIAKNRFAVAFPFACRYDAMTVVVDEDYHALVAMDFMQQTVAMTGVEPIELPNEIELSRAIPAAVELAPEHLRSAV ELICVAIAENTVTGDVAAFARDDTVKPSIKGLMADHLLDEGRHSNFWARMVRIYWHTASDADRECIAQILPVFIGHYLTN DIQKSFDLRLIDALPVNDATRRALKDEMAGLAFPINRHHPLVGNIVRFFHNSSLLDTPCVQHALRDYLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35014; Mature: 35014
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAADYQSFADAWESRATIRTRPRRVLEGDARLIYPLSRQPLVLSETFLRECPEQRDFAL CCCHHHHHHHHHHHCCCHHHHCCHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCHHHH VQTLYKFINDVVIFETEIVDKTARSIAKNRFAVAFPFACRYDAMTVVVDEDYHALVAMDF HHHHHHHHHHHHEEHHHHHHHHHHHHHHCCCEEEECCEECCCCEEEEECCCCHHHHHHHH MQQTVAMTGVEPIELPNEIELSRAIPAAVELAPEHLRSAVELICVAIAENTVTGDVAAFA HHHHHHHCCCCCCCCCCCHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHH RDDTVKPSIKGLMADHLLDEGRHSNFWARMVRIYWHTASDADRECIAQILPVFIGHYLTN CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHH DIQKSFDLRLIDALPVNDATRRALKDEMAGLAFPINRHHPLVGNIVRFFHNSSLLDTPCV HHHHHCCEEEEEECCCCHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHCCCCCCCHHH QHALRDYLV HHHHHHHCC >Mature Secondary Structure MNAADYQSFADAWESRATIRTRPRRVLEGDARLIYPLSRQPLVLSETFLRECPEQRDFAL CCCHHHHHHHHHHHCCCHHHHCCHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCHHHH VQTLYKFINDVVIFETEIVDKTARSIAKNRFAVAFPFACRYDAMTVVVDEDYHALVAMDF HHHHHHHHHHHHEEHHHHHHHHHHHHHHCCCEEEECCEECCCCEEEEECCCCHHHHHHHH MQQTVAMTGVEPIELPNEIELSRAIPAAVELAPEHLRSAVELICVAIAENTVTGDVAAFA HHHHHHHCCCCCCCCCCCHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHH RDDTVKPSIKGLMADHLLDEGRHSNFWARMVRIYWHTASDADRECIAQILPVFIGHYLTN CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHH DIQKSFDLRLIDALPVNDATRRALKDEMAGLAFPINRHHPLVGNIVRFFHNSSLLDTPCV HHHHHCCEEEEEECCCCHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHCCCCCCCHHH QHALRDYLV HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA