| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is fecR [H]
Identifier: 77456350
GI number: 77456350
Start: 130822
End: 131823
Strand: Reverse
Name: fecR [H]
Synonym: Pfl01_0122
Alternate gene names: 77456350
Gene position: 131823-130822 (Counterclockwise)
Preceding gene: 77456351
Following gene: 77456349
Centisome position: 2.05
GC content: 63.27
Gene sequence:
>1002_bases ATGCCAGTGGATAACCTCTCGCTTGGCCGTCGCGCCGAGCCACCGCAACAGGTCGTCCGACAGGCCATTCACTGGCTCTT GCGCCTGCGCAACAACCATGGCAATCCGCGCCTGAATCGCCAGTGCGAACAATGGCGCGCCGAACACCATGACCACGAAC TGGCCTGGCAACGGGTGCAGTCTCTGCAAGCTGAACTGACCCACAATCTGCGCGCCGTGCCCGGTGCGCAGGTGGCATTC AACACGCTGGAAAACAGTGCGCAGGGTCTGGGTCGACGTCAGGCGTTGAAGCTGTTGTCCGGCGCCCTGTTGATGGGTTC GGCGGGGTGGCTGGCCAGCGACACTTCCGCCTGGCAACAATGGAGCGCCGACTACGCCACCGCCACCGGCGAACGCCGTG GCTTCCAGTTGCCGGACGGCACGCGGATCGAACTCAACACCGCCAGCAGCGTGGATCTCGATTACACCGCACAGCAACGG CTGATCAGGCTGACCCGTGGCGAAATCATCGTCACCTGCGGTGGCGCCGATGCAGGTGCGCCAATTGATCGACCGCTGCG GGTGCAGAGTCGTCATGGCAGTTACGAGCCGTTCAAGGCGCGATTCATTCTGCGCCAGGAAGATGGATGCACGCGCCTGA GCGTCACCAGTGGCCGGGTCGCAATTCACTCCGCAGGCAACTCGATGGAGGCCATCGCCGGTCAGAGCTATCTGATCGAC CACCATCAAATTCGCCCGGCGCCGCCGTTGGACATGGACGCCGGTGCCTGGGTCGACGGGCTGATCGTGACCCGCAACAT GCGGCTGGGTGACTTCCTCAACGAAGTCGGTCGGTATCGTCAGGGCTTTCTGAGTTGTGCGTCGGACATTGCGGATCTGC GCCTGTCCGGCGTTTTCCGTCTTGAGGACACCGACAAGCTGCTGGCAATCCTGCCGCAGACCCTGCCGGTGCAATTGCGC TACCGCACCCGTTGGTGGGTGACGCTGGAGTCTGTGGCCTGA
Upstream 100 bases:
>100_bases ACAAGCAGATCGCCGAGCAGATGGGACTGTCTCTGCGCTCGGTAGAACGCTACGTCGCCGACGCCCTGTTTCACTGCTAC GTGCTGCGGTACGAAAACTG
Downstream 100 bases:
>100_bases AATTGTTTTGGCGGGTTTTCGCGGCAAGTCCGGCTTAGTCAGTAAGCACTTCAACTCAGCCTTCGCGACTGCCTACGGAA ACCTACAATGACTGCGCGCG
Product: putative FecR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MPVDNLSLGRRAEPPQQVVRQAIHWLLRLRNNHGNPRLNRQCEQWRAEHHDHELAWQRVQSLQAELTHNLRAVPGAQVAF NTLENSAQGLGRRQALKLLSGALLMGSAGWLASDTSAWQQWSADYATATGERRGFQLPDGTRIELNTASSVDLDYTAQQR LIRLTRGEIIVTCGGADAGAPIDRPLRVQSRHGSYEPFKARFILRQEDGCTRLSVTSGRVAIHSAGNSMEAIAGQSYLID HHQIRPAPPLDMDAGAWVDGLIVTRNMRLGDFLNEVGRYRQGFLSCASDIADLRLSGVFRLEDTDKLLAILPQTLPVQLR YRTRWWVTLESVA
Sequences:
>Translated_333_residues MPVDNLSLGRRAEPPQQVVRQAIHWLLRLRNNHGNPRLNRQCEQWRAEHHDHELAWQRVQSLQAELTHNLRAVPGAQVAF NTLENSAQGLGRRQALKLLSGALLMGSAGWLASDTSAWQQWSADYATATGERRGFQLPDGTRIELNTASSVDLDYTAQQR LIRLTRGEIIVTCGGADAGAPIDRPLRVQSRHGSYEPFKARFILRQEDGCTRLSVTSGRVAIHSAGNSMEAIAGQSYLID HHQIRPAPPLDMDAGAWVDGLIVTRNMRLGDFLNEVGRYRQGFLSCASDIADLRLSGVFRLEDTDKLLAILPQTLPVQLR YRTRWWVTLESVA >Mature_332_residues PVDNLSLGRRAEPPQQVVRQAIHWLLRLRNNHGNPRLNRQCEQWRAEHHDHELAWQRVQSLQAELTHNLRAVPGAQVAFN TLENSAQGLGRRQALKLLSGALLMGSAGWLASDTSAWQQWSADYATATGERRGFQLPDGTRIELNTASSVDLDYTAQQRL IRLTRGEIIVTCGGADAGAPIDRPLRVQSRHGSYEPFKARFILRQEDGCTRLSVTSGRVAIHSAGNSMEAIAGQSYLIDH HQIRPAPPLDMDAGAWVDGLIVTRNMRLGDFLNEVGRYRQGFLSCASDIADLRLSGVFRLEDTDKLLAILPQTLPVQLRY RTRWWVTLESVA
Specific function: Regulation of iron dicitrate transport. In the absence of citrate fecR inactivates fecI. FecR is probably a sensor that recognizes iron dicitrate in the periplasm [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790745, Length=324, Percent_Identity=32.0987654320988, Blast_Score=152, Evalue=3e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006860 - InterPro: IPR012373 [H]
Pfam domain/function: PF04773 FecR [H]
EC number: NA
Molecular weight: Translated: 37250; Mature: 37118
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVDNLSLGRRAEPPQQVVRQAIHWLLRLRNNHGNPRLNRQCEQWRAEHHDHELAWQRVQ CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHH SLQAELTHNLRAVPGAQVAFNTLENSAQGLGRRQALKLLSGALLMGSAGWLASDTSAWQQ HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHH WSADYATATGERRGFQLPDGTRIELNTASSVDLDYTAQQRLIRLTRGEIIVTCGGADAGA HCCCHHHCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCC PIDRPLRVQSRHGSYEPFKARFILRQEDGCTRLSVTSGRVAIHSAGNSMEAIAGQSYLID CCCCCCEEECCCCCCCCEEEEEEEEECCCCCEEEECCCEEEEEECCCCHHHHCCCCEEEE HHQIRPAPPLDMDAGAWVDGLIVTRNMRLGDFLNEVGRYRQGFLSCASDIADLRLSGVFR CCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE LEDTDKLLAILPQTLPVQLRYRTRWWVTLESVA ECCCHHHHHHCCCCCCEEEEEEEEEEEEEECCC >Mature Secondary Structure PVDNLSLGRRAEPPQQVVRQAIHWLLRLRNNHGNPRLNRQCEQWRAEHHDHELAWQRVQ CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHH SLQAELTHNLRAVPGAQVAFNTLENSAQGLGRRQALKLLSGALLMGSAGWLASDTSAWQQ HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHH WSADYATATGERRGFQLPDGTRIELNTASSVDLDYTAQQRLIRLTRGEIIVTCGGADAGA HCCCHHHCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCC PIDRPLRVQSRHGSYEPFKARFILRQEDGCTRLSVTSGRVAIHSAGNSMEAIAGQSYLID CCCCCCEEECCCCCCCCEEEEEEEEECCCCCEEEECCCEEEEEECCCCHHHHCCCCEEEE HHQIRPAPPLDMDAGAWVDGLIVTRNMRLGDFLNEVGRYRQGFLSCASDIADLRLSGVFR CCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE LEDTDKLLAILPQTLPVQLRYRTRWWVTLESVA ECCCHHHHHHCCCCCCEEEEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2254251; 7610040; 9278503 [H]