Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is foxA [H]

Identifier: 77456349

GI number: 77456349

Start: 128233

End: 130626

Strand: Reverse

Name: foxA [H]

Synonym: Pfl01_0121

Alternate gene names: 77456349

Gene position: 130626-128233 (Counterclockwise)

Preceding gene: 77456350

Following gene: 77456348

Centisome position: 2.03

GC content: 60.15

Gene sequence:

>2394_bases
ATGTTGCCGGGCCTGAGCATGGCGGCCAATGCCAGCGAGGTCAGCAGCCACCGCTACAACATCGCCGCCGGGCCATTGGG
CGAGGCGCTGAACCAGTTCGCACGCCAAGCCGGCATCACCTTGTCGATGACCCCACAGCAGACTCAAGGCCGACAATCAC
CCGGCGTGCAGGGCGAGTATTCGACCGATCAGGCGCTGAGTCATCTGCTCGGTGGTTCGGGTCTGGAGGCGGTCAGCCAG
GACGGCAGCAGCTATGTGTTGCGCTCCGTCGCAGAAACCGAAGCACTGGCCCTGCCGACCACCGACATCAAAGGCTTCGC
CCTCGGCAACGCGCTGGGCAGCATGGATGGCTATAACGCGACGCACAGCCAGATCGCCACCAAGACCAGTACCGCGTTGC
TGGAAACTTCGCAAAGCGTGTCCGTGGTCACCCGTGAGCAAATGGATGACCAGGGCTCGCAAACCGTGTCCCAAGCCATG
CGTTACACCCCCGGCGTGCTGACCAATCCTTACGGCGCCACGCACCGTTACGACTACGTGGCAATGCGCGGCTTCAACGA
CGGTTCGGTGGACAACATCTACCTCGACGGCCTCAAGTCGATGGGCGACAGCGGCACCTACAGCACGATGCAGGTCGATC
CGTATTTCCTCGAGCGCGTCGATATTCTCAAAGGCCCGTCGTCGGTACTTTACGGCCGTAGCTCGCCGGGCGGTCTGGTG
GCGCTGACCAGCAAGAAGCCGCTGTACGAGGCCTATCACCAGGTTCAGGCCACCGTCGGCACTCAGGGCCAGCGCGGTGT
CGGTTTTGACTTCAGCGGACCGGTCGATGACGACAAGCGCATCGCCTATCGTCTGATCGGTTTGACGGATCAGTCCGACA
CGCAATTCGACCACAACAAGGAAAAGCGCTTCGCCCTCGCGCCGACCGTCAGCATCGATTTCAACGAGGACACGTCGCTG
ACGCTGCAAGCGTATCTGCAGCATGACCCGGATGGCGGCTACCACGGTGGCGTGCCGGCCGACGGTACGATTCATCAGCG
CAACGGCAATCGCATTTCGCCGCATTTCTTCGAAGGCGAGCCGGGCATCGATGGCTACTCCCGTGATCAGCAGTCGTTCG
GTTACCAGTTCGAACACCGCTTCAACGACGTCTTCACCGCGCGGCAGAATTTCCGCTACCTCGACTCCAAAGTGAACATG
GATCAGGTGTACGCCTATGGCTGGACGTCGCCGACCAGTAACGAACTGAATCGCTACTACACCGGCGGTGACGAGCGTCT
CCACGCGTTCATCGTCGACAACATGCTCCAGGCCGAATTTTTCACCGGAGCGACCAAGCACACAGTGTTGATGGGAGCGG
ATTATCAGCGACGCAAAACCGTGGTCGACTGGACCAGTGGCGGCCTGGCGCCGATCAACGCGTTCAACCCGGAGTCTGGC
AATTCCGCTATCACGCCTTACGGCGAGACCAGCTATTTGCGGCGCCTGGAGCAGACCGGCGTTTACCTGCAAGACCTGAT
CGAGATGAACAAGTGGCGCTTCTCGCTGGGACTGCGTCAGGACTGGGTGGAAACCTCCGACGAAAACCGTATCGCCGAAG
CGGGCCGTCCGGTCGGCACCGAGATCAATGATCGACGCACCAAGCTCACCGGCCGTGCCGGCGCGCTGTATCTGTTCGAT
AACGGGCTCGCGCCGTACGTCAGCTATTCCGAGTCGTTCAACCCGAATTCCTACGCTGACAGCGCCGGCAATCCACTCGC
ACCGACCGATGGAACGCAGTGGGAAATGGGCCTGAAGTATCAGCCGCCGGGTACTGACAATCTGTTCACCGCCTCGTTGT
TCCGCATCGATCAGGAGAACCTGGCGACCAAACTGCCGCAGGAAAACTTCTATCGCGCTGTAGGCGCTGTCCGCTCTCAG
GGTCTGGAACTGGAAGCGCACATGCAGCTGACCGACAACCTCAAAGTCCTCGGCAGCTACACCTTTACCGACATTGAATA
CTCGAAGTCGATGACCAGCACCTTGAGCACACCGACCAATGTGATCGAGAACAAAGGCAACTCGCCAACCCAGGCGCCAC
GGCACATGGCATCGCTGTGGGCCGACTACAAGTTCGACAGCGCGGCACTCGACGGGCTGCGACTGGGCGGTGGTGTACGT
TATGTCGGCTATAGCTGGGCGGATGCAGAGAACACCATGAAGGTGCCGTCCTACACATTGTTCGACGCATCGATTGGCTA
TGACCTCGGCAAGGTCGGTCTGAAGGGTGTCGACGTACGCCTGAATGCGAACAATCTGACCAACGAATCCTACGTAGCCT
CCTGCGCCAGTCTGGACTTCTGCTACATGGGCGAAGAGCGCAACGTCGCCGCCACGGTCAGTTACCAGTTCTAA

Upstream 100 bases:

>100_bases
GCGCGTTACCTGTAAGAACCCTCTGAATTTCTCTGCCGAATCCGGCCTGTTGCGCCACGCCGTTCGGGCGGCGCTGTTTT
CTACCGTAATGGGTGTTGGC

Downstream 100 bases:

>100_bases
GCCTTTGTCTTGTGCATAAAAAAGCCAGCCCCTGATTTCAGGGGCTGGCTTTGTCGTAACTGTGGGGAAATTTTCATGCG
TTCGTTTCTGGTTTTATTGC

Product: TonB-dependent siderophore receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 797; Mature: 797

Protein sequence:

>797_residues
MLPGLSMAANASEVSSHRYNIAAGPLGEALNQFARQAGITLSMTPQQTQGRQSPGVQGEYSTDQALSHLLGGSGLEAVSQ
DGSSYVLRSVAETEALALPTTDIKGFALGNALGSMDGYNATHSQIATKTSTALLETSQSVSVVTREQMDDQGSQTVSQAM
RYTPGVLTNPYGATHRYDYVAMRGFNDGSVDNIYLDGLKSMGDSGTYSTMQVDPYFLERVDILKGPSSVLYGRSSPGGLV
ALTSKKPLYEAYHQVQATVGTQGQRGVGFDFSGPVDDDKRIAYRLIGLTDQSDTQFDHNKEKRFALAPTVSIDFNEDTSL
TLQAYLQHDPDGGYHGGVPADGTIHQRNGNRISPHFFEGEPGIDGYSRDQQSFGYQFEHRFNDVFTARQNFRYLDSKVNM
DQVYAYGWTSPTSNELNRYYTGGDERLHAFIVDNMLQAEFFTGATKHTVLMGADYQRRKTVVDWTSGGLAPINAFNPESG
NSAITPYGETSYLRRLEQTGVYLQDLIEMNKWRFSLGLRQDWVETSDENRIAEAGRPVGTEINDRRTKLTGRAGALYLFD
NGLAPYVSYSESFNPNSYADSAGNPLAPTDGTQWEMGLKYQPPGTDNLFTASLFRIDQENLATKLPQENFYRAVGAVRSQ
GLELEAHMQLTDNLKVLGSYTFTDIEYSKSMTSTLSTPTNVIENKGNSPTQAPRHMASLWADYKFDSAALDGLRLGGGVR
YVGYSWADAENTMKVPSYTLFDASIGYDLGKVGLKGVDVRLNANNLTNESYVASCASLDFCYMGEERNVAATVSYQF

Sequences:

>Translated_797_residues
MLPGLSMAANASEVSSHRYNIAAGPLGEALNQFARQAGITLSMTPQQTQGRQSPGVQGEYSTDQALSHLLGGSGLEAVSQ
DGSSYVLRSVAETEALALPTTDIKGFALGNALGSMDGYNATHSQIATKTSTALLETSQSVSVVTREQMDDQGSQTVSQAM
RYTPGVLTNPYGATHRYDYVAMRGFNDGSVDNIYLDGLKSMGDSGTYSTMQVDPYFLERVDILKGPSSVLYGRSSPGGLV
ALTSKKPLYEAYHQVQATVGTQGQRGVGFDFSGPVDDDKRIAYRLIGLTDQSDTQFDHNKEKRFALAPTVSIDFNEDTSL
TLQAYLQHDPDGGYHGGVPADGTIHQRNGNRISPHFFEGEPGIDGYSRDQQSFGYQFEHRFNDVFTARQNFRYLDSKVNM
DQVYAYGWTSPTSNELNRYYTGGDERLHAFIVDNMLQAEFFTGATKHTVLMGADYQRRKTVVDWTSGGLAPINAFNPESG
NSAITPYGETSYLRRLEQTGVYLQDLIEMNKWRFSLGLRQDWVETSDENRIAEAGRPVGTEINDRRTKLTGRAGALYLFD
NGLAPYVSYSESFNPNSYADSAGNPLAPTDGTQWEMGLKYQPPGTDNLFTASLFRIDQENLATKLPQENFYRAVGAVRSQ
GLELEAHMQLTDNLKVLGSYTFTDIEYSKSMTSTLSTPTNVIENKGNSPTQAPRHMASLWADYKFDSAALDGLRLGGGVR
YVGYSWADAENTMKVPSYTLFDASIGYDLGKVGLKGVDVRLNANNLTNESYVASCASLDFCYMGEERNVAATVSYQF
>Mature_797_residues
MLPGLSMAANASEVSSHRYNIAAGPLGEALNQFARQAGITLSMTPQQTQGRQSPGVQGEYSTDQALSHLLGGSGLEAVSQ
DGSSYVLRSVAETEALALPTTDIKGFALGNALGSMDGYNATHSQIATKTSTALLETSQSVSVVTREQMDDQGSQTVSQAM
RYTPGVLTNPYGATHRYDYVAMRGFNDGSVDNIYLDGLKSMGDSGTYSTMQVDPYFLERVDILKGPSSVLYGRSSPGGLV
ALTSKKPLYEAYHQVQATVGTQGQRGVGFDFSGPVDDDKRIAYRLIGLTDQSDTQFDHNKEKRFALAPTVSIDFNEDTSL
TLQAYLQHDPDGGYHGGVPADGTIHQRNGNRISPHFFEGEPGIDGYSRDQQSFGYQFEHRFNDVFTARQNFRYLDSKVNM
DQVYAYGWTSPTSNELNRYYTGGDERLHAFIVDNMLQAEFFTGATKHTVLMGADYQRRKTVVDWTSGGLAPINAFNPESG
NSAITPYGETSYLRRLEQTGVYLQDLIEMNKWRFSLGLRQDWVETSDENRIAEAGRPVGTEINDRRTKLTGRAGALYLFD
NGLAPYVSYSESFNPNSYADSAGNPLAPTDGTQWEMGLKYQPPGTDNLFTASLFRIDQENLATKLPQENFYRAVGAVRSQ
GLELEAHMQLTDNLKVLGSYTFTDIEYSKSMTSTLSTPTNVIENKGNSPTQAPRHMASLWADYKFDSAALDGLRLGGGVR
YVGYSWADAENTMKVPSYTLFDASIGYDLGKVGLKGVDVRLNANNLTNESYVASCASLDFCYMGEERNVAATVSYQF

Specific function: Ferrioxamine binding and uptake, in association with the tonB protein. May play a role in intestinal colonization [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1786344, Length=715, Percent_Identity=39.4405594405594, Blast_Score=472, Evalue=1e-134,
Organism=Escherichia coli, GI1787024, Length=733, Percent_Identity=26.3301500682128, Blast_Score=171, Evalue=2e-43,
Organism=Escherichia coli, GI1787344, Length=759, Percent_Identity=24.1106719367589, Blast_Score=125, Evalue=1e-29,
Organism=Escherichia coli, GI1790743, Length=861, Percent_Identity=23.1126596980255, Blast_Score=101, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 87459; Mature: 87459

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS00501 SPASE_I_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPGLSMAANASEVSSHRYNIAAGPLGEALNQFARQAGITLSMTPQQTQGRQSPGVQGEY
CCCCCCCCCCHHHHHCCCEEEECCCHHHHHHHHHHHHCCEEEECCCHHCCCCCCCCCCCC
STDQALSHLLGGSGLEAVSQDGSSYVLRSVAETEALALPTTDIKGFALGNALGSMDGYNA
CHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHEEECCCCCCCCEEHHHHHCCCCCCCC
THSQIATKTSTALLETSQSVSVVTREQMDDQGSQTVSQAMRYTPGVLTNPYGATHRYDYV
HHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEE
AMRGFNDGSVDNIYLDGLKSMGDSGTYSTMQVDPYFLERVDILKGPSSVLYGRSSPGGLV
EEECCCCCCCCEEEECCHHHCCCCCCEEEEEECHHHHHHHHHHCCCCCEEECCCCCCCEE
ALTSKKPLYEAYHQVQATVGTQGQRGVGFDFSGPVDDDKRIAYRLIGLTDQSDTQFDHNK
EECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCC
EKRFALAPTVSIDFNEDTSLTLQAYLQHDPDGGYHGGVPADGTIHQRNGNRISPHFFEGE
CCEEEECCEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCEEECCC
PGIDGYSRDQQSFGYQFEHRFNDVFTARQNFRYLDSKVNMDQVYAYGWTSPTSNELNRYY
CCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHEE
TGGDERLHAFIVDNMLQAEFFTGATKHTVLMGADYQRRKTVVDWTSGGLAPINAFNPESG
CCCCCEEEEEEHHHHHHHHHHCCCCCEEEEECCCHHHCCEEEEECCCCCCCCCCCCCCCC
NSAITPYGETSYLRRLEQTGVYLQDLIEMNKWRFSLGLRQDWVETSDENRIAEAGRPVGT
CCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCEEEECCCCHHHHCCCCCCHHHHCCCCCCC
EINDRRTKLTGRAGALYLFDNGLAPYVSYSESFNPNSYADSAGNPLAPTDGTQWEMGLKY
CCCCCCEEECCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECEEE
QPPGTDNLFTASLFRIDQENLATKLPQENFYRAVGAVRSQGLELEAHMQLTDNLKVLGSY
CCCCCCCCEEHHHEEECHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEEE
TFTDIEYSKSMTSTLSTPTNVIENKGNSPTQAPRHMASLWADYKFDSAALDGLRLGGGVR
EEEEEHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHCCEEECCCEE
YVGYSWADAENTMKVPSYTLFDASIGYDLGKVGLKGVDVRLNANNLTNESYVASCASLDF
EEEEEECCCCCCEECCCEEEEECCCCCCHHHCCCCEEEEEECCCCCCCHHHHHHHHCCEE
CYMGEERNVAATVSYQF
EEECCCCCEEEEEEECC
>Mature Secondary Structure
MLPGLSMAANASEVSSHRYNIAAGPLGEALNQFARQAGITLSMTPQQTQGRQSPGVQGEY
CCCCCCCCCCHHHHHCCCEEEECCCHHHHHHHHHHHHCCEEEECCCHHCCCCCCCCCCCC
STDQALSHLLGGSGLEAVSQDGSSYVLRSVAETEALALPTTDIKGFALGNALGSMDGYNA
CHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHEEECCCCCCCCEEHHHHHCCCCCCCC
THSQIATKTSTALLETSQSVSVVTREQMDDQGSQTVSQAMRYTPGVLTNPYGATHRYDYV
HHHHHHHHHHHHHHHCCCCCEEHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEE
AMRGFNDGSVDNIYLDGLKSMGDSGTYSTMQVDPYFLERVDILKGPSSVLYGRSSPGGLV
EEECCCCCCCCEEEECCHHHCCCCCCEEEEEECHHHHHHHHHHCCCCCEEECCCCCCCEE
ALTSKKPLYEAYHQVQATVGTQGQRGVGFDFSGPVDDDKRIAYRLIGLTDQSDTQFDHNK
EECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCC
EKRFALAPTVSIDFNEDTSLTLQAYLQHDPDGGYHGGVPADGTIHQRNGNRISPHFFEGE
CCEEEECCEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCEEECCC
PGIDGYSRDQQSFGYQFEHRFNDVFTARQNFRYLDSKVNMDQVYAYGWTSPTSNELNRYY
CCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHEE
TGGDERLHAFIVDNMLQAEFFTGATKHTVLMGADYQRRKTVVDWTSGGLAPINAFNPESG
CCCCCEEEEEEHHHHHHHHHHCCCCCEEEEECCCHHHCCEEEEECCCCCCCCCCCCCCCC
NSAITPYGETSYLRRLEQTGVYLQDLIEMNKWRFSLGLRQDWVETSDENRIAEAGRPVGT
CCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCEEEECCCCHHHHCCCCCCHHHHCCCCCCC
EINDRRTKLTGRAGALYLFDNGLAPYVSYSESFNPNSYADSAGNPLAPTDGTQWEMGLKY
CCCCCCEEECCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECEEE
QPPGTDNLFTASLFRIDQENLATKLPQENFYRAVGAVRSQGLELEAHMQLTDNLKVLGSY
CCCCCCCCEEHHHEEECHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEEE
TFTDIEYSKSMTSTLSTPTNVIENKGNSPTQAPRHMASLWADYKFDSAALDGLRLGGGVR
EEEEEHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHCCEEECCCEE
YVGYSWADAENTMKVPSYTLFDASIGYDLGKVGLKGVDVRLNANNLTNESYVASCASLDF
EEEEEECCCCCCEECCCEEEEECCCCCCHHHCCCCEEEEEECCCCCCCHHHHHHHHCCEE
CYMGEERNVAATVSYQF
EEECCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677609; 10103258; 7642488 [H]