Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77456348

Identifier: 77456348

GI number: 77456348

Start: 126979

End: 128157

Strand: Reverse

Name: 77456348

Synonym: Pfl01_0120

Alternate gene names: NA

Gene position: 128157-126979 (Counterclockwise)

Preceding gene: 77456349

Following gene: 77456347

Centisome position: 1.99

GC content: 57.59

Gene sequence:

>1179_bases
ATGCGTTCGTTTCTGGTTTTATTGCACCGGTATATCGGGTTGGCCACGGCGGTTTTTCTGCTGCTGGCGGGGATTACCGG
CAGCATTCTGGCATTCAATCATGAGCTGGATGAGTGGTTGAATCCGGAGTTTTACGCGGCGTCGGCCGAGGGGGAGCGCC
TAGCGCCAGGCGAGCTGGTTGATGCGCTGCAATCGGCACATCCGAAGTTGCAGGTCTGGTACATGGAGTACCCGAATGAG
GCAGGCCACACGGCATTGCTCGCGGCGGTTGCGCGGAATGGTCCGGCGACCGGCGAACCGTTTGAAGAACGCAATCAAGT
GTTCTATCTCGACCCGGTCAATGGCGAGCAAAAGGGCCAGCGTTACTGGGGCGAATGCTGTTTCCAGCGTGAGAACTTCG
TTCCGTTCATTCTCGAGTTCCACTACAACCTGACACTGCCCGGCAACTGGGGTTTGCTGTTGATGGGGTTGGTGGCCATC
GCCTGGGTAATCGATTGCTTCATCGCCCTCTGGCTGACGTTGCCGCGGGGTAAACCGTTCTGGAAGAAGTGGTCTATGGC
CTGGAAGATCAAGGGCGGTCATGCCTATCGACTCAACTTCGATCTGCATCGGGCAGGGGGCTTGTGGCTGTGGTTGTTGT
TGCTGCCGATCGCCGTCAGCAGCGTGGCGATGAACCTGCCGAGCCAGGTTTTCAAACCGGTGGTGTCGTTGTTTTCTCCG
ATTGAACCGAGCGTGTATGAGGCGCGGGGGCGGATGCCTGCCGAAGAACTGGGGATCACCCGATTGAGTTATCAACAGGC
ATACGAAAGGGCACAGCAGGAGGGGAAAAGGTTGGGGCTGACAGCGGCGATCGGCGAGTTGTATTACAGCTTTGAGTACA
ACTTCTACGGAGCGGGGTTTGGAGAGCATGACACCGAGGCCCACGGTAAATCCTGGTTGTTCTTCCACGGTACTGACGGA
CGATTACTGGGGCAGGAGATCGCAGGAGAAGGGACGTTGGGAGAGCGGTTTTATCGGTTGCAATTGCCGATACATGGGGG
ACGGATCATAGGCTTCACCGGGCAAGTGATGATCGCGATATTGGGTGTTCTGATTGCGGGGTTGTCGGGGACTGGCGTCT
ACATCTGGTGGCGCAAGTGGCAGGCTCGTCGGTGCAGCATGGCACGCAGAGCGGGTTGA

Upstream 100 bases:

>100_bases
CGCCACGGTCAGTTACCAGTTCTAAGCCTTTGTCTTGTGCATAAAAAAGCCAGCCCCTGATTTCAGGGGCTGGCTTTGTC
GTAACTGTGGGGAAATTTTC

Downstream 100 bases:

>100_bases
AGATCGGACTTTTGTGGGCACTGAAACGACAAAACCCCTGTCTGCGTTAGCAGACAGGGGTTTCGGAATTCGATCTTGAC
GATGACCTACTCTCACATGG

Product: PepSY-associated TM helix-containing protein

Products: NA

Alternate protein names: PepSY-Associated TM Helix; PepSY-Associated TM Helix Domain Protein; Iron-Regulated Membrane Protein; PepSY-Associated TM Helix Family; Transporter-Like Membrane Protein; Pepsy-Associated Tm Helix Domain Protein; Sulfite Reductase Flavoprotein Component

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MRSFLVLLHRYIGLATAVFLLLAGITGSILAFNHELDEWLNPEFYAASAEGERLAPGELVDALQSAHPKLQVWYMEYPNE
AGHTALLAAVARNGPATGEPFEERNQVFYLDPVNGEQKGQRYWGECCFQRENFVPFILEFHYNLTLPGNWGLLLMGLVAI
AWVIDCFIALWLTLPRGKPFWKKWSMAWKIKGGHAYRLNFDLHRAGGLWLWLLLLPIAVSSVAMNLPSQVFKPVVSLFSP
IEPSVYEARGRMPAEELGITRLSYQQAYERAQQEGKRLGLTAAIGELYYSFEYNFYGAGFGEHDTEAHGKSWLFFHGTDG
RLLGQEIAGEGTLGERFYRLQLPIHGGRIIGFTGQVMIAILGVLIAGLSGTGVYIWWRKWQARRCSMARRAG

Sequences:

>Translated_392_residues
MRSFLVLLHRYIGLATAVFLLLAGITGSILAFNHELDEWLNPEFYAASAEGERLAPGELVDALQSAHPKLQVWYMEYPNE
AGHTALLAAVARNGPATGEPFEERNQVFYLDPVNGEQKGQRYWGECCFQRENFVPFILEFHYNLTLPGNWGLLLMGLVAI
AWVIDCFIALWLTLPRGKPFWKKWSMAWKIKGGHAYRLNFDLHRAGGLWLWLLLLPIAVSSVAMNLPSQVFKPVVSLFSP
IEPSVYEARGRMPAEELGITRLSYQQAYERAQQEGKRLGLTAAIGELYYSFEYNFYGAGFGEHDTEAHGKSWLFFHGTDG
RLLGQEIAGEGTLGERFYRLQLPIHGGRIIGFTGQVMIAILGVLIAGLSGTGVYIWWRKWQARRCSMARRAG
>Mature_392_residues
MRSFLVLLHRYIGLATAVFLLLAGITGSILAFNHELDEWLNPEFYAASAEGERLAPGELVDALQSAHPKLQVWYMEYPNE
AGHTALLAAVARNGPATGEPFEERNQVFYLDPVNGEQKGQRYWGECCFQRENFVPFILEFHYNLTLPGNWGLLLMGLVAI
AWVIDCFIALWLTLPRGKPFWKKWSMAWKIKGGHAYRLNFDLHRAGGLWLWLLLLPIAVSSVAMNLPSQVFKPVVSLFSP
IEPSVYEARGRMPAEELGITRLSYQQAYERAQQEGKRLGLTAAIGELYYSFEYNFYGAGFGEHDTEAHGKSWLFFHGTDG
RLLGQEIAGEGTLGERFYRLQLPIHGGRIIGFTGQVMIAILGVLIAGLSGTGVYIWWRKWQARRCSMARRAG

Specific function: Unknown

COG id: COG3182

COG function: function code S; Uncharacterized iron-regulated membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44193; Mature: 44193

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSFLVLLHRYIGLATAVFLLLAGITGSILAFNHELDEWLNPEFYAASAEGERLAPGELV
CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHCCCCEEEECCCCCCCCCHHHH
DALQSAHPKLQVWYMEYPNEAGHTALLAAVARNGPATGEPFEERNQVFYLDPVNGEQKGQ
HHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCHHHCCCEEEEECCCCCHHHH
RYWGECCFQRENFVPFILEFHYNLTLPGNWGLLLMGLVAIAWVIDCFIALWLTLPRGKPF
HHHHHHHHCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
WKKWSMAWKIKGGHAYRLNFDLHRAGGLWLWLLLLPIAVSSVAMNLPSQVFKPVVSLFSP
HHCCCEEEEEECCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
IEPSVYEARGRMPAEELGITRLSYQQAYERAQQEGKRLGLTAAIGELYYSFEYNFYGAGF
CCCHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEEEEECCC
GEHDTEAHGKSWLFFHGTDGRLLGQEIAGEGTLGERFYRLQLPIHGGRIIGFTGQVMIAI
CCCCCCCCCCEEEEEECCCCCEEHHHHCCCCCCCCEEEEEEEEECCCEEEEEHHHHHHHH
LGVLIAGLSGTGVYIWWRKWQARRCSMARRAG
HHHHHHCCCCCEEEEEEECHHHHHHHHHHHCC
>Mature Secondary Structure
MRSFLVLLHRYIGLATAVFLLLAGITGSILAFNHELDEWLNPEFYAASAEGERLAPGELV
CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHCCCCEEEECCCCCCCCCHHHH
DALQSAHPKLQVWYMEYPNEAGHTALLAAVARNGPATGEPFEERNQVFYLDPVNGEQKGQ
HHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCHHHCCCEEEEECCCCCHHHH
RYWGECCFQRENFVPFILEFHYNLTLPGNWGLLLMGLVAIAWVIDCFIALWLTLPRGKPF
HHHHHHHHCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
WKKWSMAWKIKGGHAYRLNFDLHRAGGLWLWLLLLPIAVSSVAMNLPSQVFKPVVSLFSP
HHCCCEEEEEECCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
IEPSVYEARGRMPAEELGITRLSYQQAYERAQQEGKRLGLTAAIGELYYSFEYNFYGAGF
CCCHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEEEEECCC
GEHDTEAHGKSWLFFHGTDGRLLGQEIAGEGTLGERFYRLQLPIHGGRIIGFTGQVMIAI
CCCCCCCCCCEEEEEECCCCCEEHHHHCCCCCCCCEEEEEEEEECCCEEEEEHHHHHHHH
LGVLIAGLSGTGVYIWWRKWQARRCSMARRAG
HHHHHHCCCCCEEEEEEECHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA