| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456321
Identifier: 77456321
GI number: 77456321
Start: 99549
End: 100679
Strand: Reverse
Name: 77456321
Synonym: Pfl01_0093
Alternate gene names: NA
Gene position: 100679-99549 (Counterclockwise)
Preceding gene: 77456324
Following gene: 77456318
Centisome position: 1.56
GC content: 59.86
Gene sequence:
>1131_bases ATGGGCGGGATAGTCTTGGGCAGACTTTCCGGGGGATTTCTTATTTTGATCAGGCCGCTTCCAAGCCATGGGTTACTTGA TCGCGTTTTGCGGGTTTTGTTTCCGGGTGTGATGATTTTGTTGCTCAACGGTTGCTCAAGCCTGAGCTATTACGGCCAGC TGGCCAGCGGTCAGCTGCAGCTTTTGCGGGCGCGGGAGCCGGTGGCCAAGGTGATCGCAGACCCGGCTCGCGATGCCAAG CTGCGCACTCACCTGGCCCAATCCCAGAAAGCCCGGGCCTTCGCCAGCGAACACCTGCACCTGCCGGACAACCAAAGCTA TCGCCTTTACGCCGATATCGGTCGGCCGTTTGTCGTGTGGAATGTGTTCGCCACCCCGGAGTTTTCCCTGAGCCCGCAGA ACCATTGCTTCCCGATTGCCGGTTGCGTGGCCTACCGCGGCTATTACAGCCAGAGCGCGGCGCGGGGCGAAGCTGCGATT CAGCGCCTGCAAGGCATGGACGTGTCGATCGGCGGCGTCGAGGCCTACTCGACCCTCGGCTGGTTCAACGACCCGATCCT CAATTCGATGATGGGCTGGGGCGACGAGCGTCTGGCGACGCTGATCTTCCATGAACTGGCCCACCAGCGTTTCTATGTGA AGGACGACACCGAGTTCAACGAGTCCTTCGCGACCTTCGTCGAGCAGGAAGGTACGCGGCAGTGGCGAGCGTTTCGCGGC TTGCCCCCGGAAAACGACTCGAAGCTCAAGCAGCGCGATCAATTCATTCAGTTGATCCTCGATACCCGTTCACGCCTTGA AAAACTCTATGCACAACCATTGGCGACAGCGCAGATGCGCGAACGCAAGGCGGCGGAGTTCGAACGGTTTCGACACGACT ACCGAATGATGCGCGATGGCCAGTGGGCCGGAGACAAACGTTATGACGCCTGGGTCAATGCGCCGTTGAACAACGCACGG CTGTTGCCGTTCGGGCTATATGACCAATGGGTACCGGCGTTTGCGGCGTTGTTCGGGCAAGTGAAGGGAGATTGGCCGCA GTTTTATGCGCGGGTCGAACAGCTGGGTAAATTGCCGGCGGACAAGCGCAAGGCAGCACTGCGTGAGCTGGCTGCCCTTC GCCCGGATTGA
Upstream 100 bases:
>100_bases AGGCTTGCGAGGGGTCAGGGGTCGGCATTCCGAATCCGGCACAACCGGCCAGCGTCAGCACGCTTCCTGTCAGTATCAAC ATGCGCATAGCGGAGCTCCA
Downstream 100 bases:
>100_bases CGATCAGCGCTGCAAAAACGCCTGATGCAGCTCCGCCAGCGTCTCGAAGTGATACGCCGGTGCTTCAGCGCTCAGCTCTT CATGGCTGCCAAAACCGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: Aminopeptidase; Aminopeptidase-Like Protein; Lipoprotein
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MGGIVLGRLSGGFLILIRPLPSHGLLDRVLRVLFPGVMILLLNGCSSLSYYGQLASGQLQLLRAREPVAKVIADPARDAK LRTHLAQSQKARAFASEHLHLPDNQSYRLYADIGRPFVVWNVFATPEFSLSPQNHCFPIAGCVAYRGYYSQSAARGEAAI QRLQGMDVSIGGVEAYSTLGWFNDPILNSMMGWGDERLATLIFHELAHQRFYVKDDTEFNESFATFVEQEGTRQWRAFRG LPPENDSKLKQRDQFIQLILDTRSRLEKLYAQPLATAQMRERKAAEFERFRHDYRMMRDGQWAGDKRYDAWVNAPLNNAR LLPFGLYDQWVPAFAALFGQVKGDWPQFYARVEQLGKLPADKRKAALRELAALRPD
Sequences:
>Translated_376_residues MGGIVLGRLSGGFLILIRPLPSHGLLDRVLRVLFPGVMILLLNGCSSLSYYGQLASGQLQLLRAREPVAKVIADPARDAK LRTHLAQSQKARAFASEHLHLPDNQSYRLYADIGRPFVVWNVFATPEFSLSPQNHCFPIAGCVAYRGYYSQSAARGEAAI QRLQGMDVSIGGVEAYSTLGWFNDPILNSMMGWGDERLATLIFHELAHQRFYVKDDTEFNESFATFVEQEGTRQWRAFRG LPPENDSKLKQRDQFIQLILDTRSRLEKLYAQPLATAQMRERKAAEFERFRHDYRMMRDGQWAGDKRYDAWVNAPLNNAR LLPFGLYDQWVPAFAALFGQVKGDWPQFYARVEQLGKLPADKRKAALRELAALRPD >Mature_375_residues GGIVLGRLSGGFLILIRPLPSHGLLDRVLRVLFPGVMILLLNGCSSLSYYGQLASGQLQLLRAREPVAKVIADPARDAKL RTHLAQSQKARAFASEHLHLPDNQSYRLYADIGRPFVVWNVFATPEFSLSPQNHCFPIAGCVAYRGYYSQSAARGEAAIQ RLQGMDVSIGGVEAYSTLGWFNDPILNSMMGWGDERLATLIFHELAHQRFYVKDDTEFNESFATFVEQEGTRQWRAFRGL PPENDSKLKQRDQFIQLILDTRSRLEKLYAQPLATAQMRERKAAEFERFRHDYRMMRDGQWAGDKRYDAWVNAPLNNARL LPFGLYDQWVPAFAALFGQVKGDWPQFYARVEQLGKLPADKRKAALRELAALRPD
Specific function: Unknown
COG id: COG4324
COG function: function code R; Predicted aminopeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42738; Mature: 42607
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: PS00287 CYSTATIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGIVLGRLSGGFLILIRPLPSHGLLDRVLRVLFPGVMILLLNGCSSLSYYGQLASGQLQ CCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHH LLRAREPVAKVIADPARDAKLRTHLAQSQKARAFASEHLHLPDNQSYRLYADIGRPFVVW HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEE NVFATPEFSLSPQNHCFPIAGCVAYRGYYSQSAARGEAAIQRLQGMDVSIGGVEAYSTLG EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHC WFNDPILNSMMGWGDERLATLIFHELAHQRFYVKDDTEFNESFATFVEQEGTRQWRAFRG CCCCHHHHHHHCCCHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHCHHHHHHHCC LPPENDSKLKQRDQFIQLILDTRSRLEKLYAQPLATAQMRERKAAEFERFRHDYRMMRDG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QWAGDKRYDAWVNAPLNNARLLPFGLYDQWVPAFAALFGQVKGDWPQFYARVEQLGKLPA CCCCCCCCHHEECCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC DKRKAALRELAALRPD HHHHHHHHHHHHCCCC >Mature Secondary Structure GGIVLGRLSGGFLILIRPLPSHGLLDRVLRVLFPGVMILLLNGCSSLSYYGQLASGQLQ CCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHH LLRAREPVAKVIADPARDAKLRTHLAQSQKARAFASEHLHLPDNQSYRLYADIGRPFVVW HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEE NVFATPEFSLSPQNHCFPIAGCVAYRGYYSQSAARGEAAIQRLQGMDVSIGGVEAYSTLG EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHC WFNDPILNSMMGWGDERLATLIFHELAHQRFYVKDDTEFNESFATFVEQEGTRQWRAFRG CCCCHHHHHHHCCCHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHCHHHHHHHCC LPPENDSKLKQRDQFIQLILDTRSRLEKLYAQPLATAQMRERKAAEFERFRHDYRMMRDG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QWAGDKRYDAWVNAPLNNARLLPFGLYDQWVPAFAALFGQVKGDWPQFYARVEQLGKLPA CCCCCCCCHHEECCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC DKRKAALRELAALRPD HHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA