| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is gph [C]
Identifier: 77456320
GI number: 77456320
Start: 98895
End: 99545
Strand: Direct
Name: gph [C]
Synonym: Pfl01_0092
Alternate gene names: 77456320
Gene position: 98895-99545 (Clockwise)
Preceding gene: 77456319
Following gene: 77456322
Centisome position: 1.54
GC content: 59.6
Gene sequence:
>651_bases ATGCATTACCAGACCGTACTGTTCGACCTTGACGGCACCCTCACCGACCCGCGTGAGGGCATCACCCGTTCCATCCAGTT CGCCTTGAGCAAACTCGGCATCGACGAGCCGGATCTGACCAGACTGGAACACTTCATCGGCCCGCCGCTGTTGCAAGCGT TCATGCAGTTTTATGGTTTCGACGAAGCCAAGGCTTGGGAGGCGGTGAATTACTACCGCGAGCGCTTCAAGGTTACCGGC CTGTACGAGAACCGGGTGTTCGACGGCGTCACGCCGTTGTTGGAAACCCTGGGCAGCCAGGGCCGGCAGTTGTATATCGC GACGTCGAAGCCTTGGGTGTTCGCCCGGGAAATCGCCCGGCACTTTGATTTCGCCAAACACTTCAAGGTGATCTACGGCA GCGAACTGGACGGCACCCGTACCAACAAGGTCGAGCTGATTGCCCACCTGATCGCCGAGGAAAGACTGGACCCGGCCAGT ACGTTGATGATCGGTGACCGCAAACACGACCTGATCGGTGCTCGCAGCAACGGTCTGGACGCGGCGGCCGTGGGTTACGG TTTTGGCAGCCATGAAGAGCTGAGCGCTGAAGCACCGGCGTATCACTTCGAGACGCTGGCGGAGCTGCATCAGGCGTTTT TGCAGCGCTGA
Upstream 100 bases:
>100_bases TTCACCTACAGCGCGGCGAACTACGTGAAGCTCAAGGACCTGCATCTGGCTGAAGGCTACGACCAGCTCTGACTTTTCTT TCTACCGCCCGGGATTTTTC
Downstream 100 bases:
>100_bases TCGTCAATCCGGGCGAAGGGCAGCCAGCTCACGCAGTGCTGCCTTGCGCTTGTCCGCCGGCAATTTACCCAGCTGTTCGA CCCGCGCATAAAACTGCGGC
Product: HAD family hydrolase
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase [H]
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MHYQTVLFDLDGTLTDPREGITRSIQFALSKLGIDEPDLTRLEHFIGPPLLQAFMQFYGFDEAKAWEAVNYYRERFKVTG LYENRVFDGVTPLLETLGSQGRQLYIATSKPWVFAREIARHFDFAKHFKVIYGSELDGTRTNKVELIAHLIAEERLDPAS TLMIGDRKHDLIGARSNGLDAAAVGYGFGSHEELSAEAPAYHFETLAELHQAFLQR
Sequences:
>Translated_216_residues MHYQTVLFDLDGTLTDPREGITRSIQFALSKLGIDEPDLTRLEHFIGPPLLQAFMQFYGFDEAKAWEAVNYYRERFKVTG LYENRVFDGVTPLLETLGSQGRQLYIATSKPWVFAREIARHFDFAKHFKVIYGSELDGTRTNKVELIAHLIAEERLDPAS TLMIGDRKHDLIGARSNGLDAAAVGYGFGSHEELSAEAPAYHFETLAELHQAFLQR >Mature_216_residues MHYQTVLFDLDGTLTDPREGITRSIQFALSKLGIDEPDLTRLEHFIGPPLLQAFMQFYGFDEAKAWEAVNYYRERFKVTG LYENRVFDGVTPLLETLGSQGRQLYIATSKPWVFAREIARHFDFAKHFKVIYGSELDGTRTNKVELIAHLIAEERLDPAS TLMIGDRKHDLIGARSNGLDAAAVGYGFGSHEELSAEAPAYHFETLAELHQAFLQR
Specific function: Specifically dephosphorylates nucleoside 5'- monophosphates to nucleosides and inorganic phosphate. Displays high activity toward 5'-UMP and 5'-IMP, significant activity against 5'-XMP and 5'-TMP, and low activity against 5'-CMP [H]
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.1.3.5 [H]
Molecular weight: Translated: 24512; Mature: 24512
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHYQTVLFDLDGTLTDPREGITRSIQFALSKLGIDEPDLTRLEHFIGPPLLQAFMQFYGF CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHCC DEAKAWEAVNYYRERFKVTGLYENRVFDGVTPLLETLGSQGRQLYIATSKPWVFAREIAR CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHH HFDFAKHFKVIYGSELDGTRTNKVELIAHLIAEERLDPASTLMIGDRKHDLIGARSNGLD HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHEEECCCCHHHCCCCCCCCC AAAVGYGFGSHEELSAEAPAYHFETLAELHQAFLQR HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHYQTVLFDLDGTLTDPREGITRSIQFALSKLGIDEPDLTRLEHFIGPPLLQAFMQFYGF CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHCC DEAKAWEAVNYYRERFKVTGLYENRVFDGVTPLLETLGSQGRQLYIATSKPWVFAREIAR CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHH HFDFAKHFKVIYGSELDGTRTNKVELIAHLIAEERLDPASTLMIGDRKHDLIGARSNGLD HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHEEECCCCHHHCCCCCCCCC AAAVGYGFGSHEELSAEAPAYHFETLAELHQAFLQR HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]