| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456322
Identifier: 77456322
GI number: 77456322
Start: 100692
End: 101114
Strand: Direct
Name: 77456322
Synonym: Pfl01_0094
Alternate gene names: NA
Gene position: 100692-101114 (Clockwise)
Preceding gene: 77456320
Following gene: 77456323
Centisome position: 1.56
GC content: 60.52
Gene sequence:
>423_bases ATGCGCATGTTGATACTGACAGGAAGCGTGCTGACGCTGGCCGGTTGTGCCGGATTCGGAATGCCGACCCCTGACCCCTC GCAAGCCTGGATCGATCTGGATGCCCGGCAACAGGACACGGCGCTCCAGGCGCTGGAAGTCGACAACAAGGCTTCCGTCG ATCATCGTTACTTCGAAGTGCAGCCCGGCAGCCATGAGCTGAGGGTGCGTTATCAATTTCCGGTCGAGGCGACCAACATC GGCCCGGATGCCGAGCCGCTATGGCGTGATTGTCAGTTGAGCGTGAAATTCAAGGATTTCAACGCCGGCCAGCGTTATCA GTTGCAGGCGGGAAGCATCGGTTTCCGCCCGTGGGCCAAACTCTACGATCAACAACGCAACGTGGTGGGCCAGGGCACGC CGGCAGGCTGCCAGCGAACCTGA
Upstream 100 bases:
>100_bases AAACGCGATCAAGTAACCCATGGCTTGGAAGCGGCCTGATCAAAATAAGAAATCCCCCGGAAAGTCTGCCCAAGACTATC CCGCCCATTGGAGCTCCGCT
Downstream 100 bases:
>100_bases TCGGCGTTATGCTGGATGTCCGAACTCACGGACATTCATCATGCGCACGTTGATGCTGTTGCTCGCCGCCGGCCTGCTCG CCGGTTGCCAGACACCATTG
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MRMLILTGSVLTLAGCAGFGMPTPDPSQAWIDLDARQQDTALQALEVDNKASVDHRYFEVQPGSHELRVRYQFPVEATNI GPDAEPLWRDCQLSVKFKDFNAGQRYQLQAGSIGFRPWAKLYDQQRNVVGQGTPAGCQRT
Sequences:
>Translated_140_residues MRMLILTGSVLTLAGCAGFGMPTPDPSQAWIDLDARQQDTALQALEVDNKASVDHRYFEVQPGSHELRVRYQFPVEATNI GPDAEPLWRDCQLSVKFKDFNAGQRYQLQAGSIGFRPWAKLYDQQRNVVGQGTPAGCQRT >Mature_140_residues MRMLILTGSVLTLAGCAGFGMPTPDPSQAWIDLDARQQDTALQALEVDNKASVDHRYFEVQPGSHELRVRYQFPVEATNI GPDAEPLWRDCQLSVKFKDFNAGQRYQLQAGSIGFRPWAKLYDQQRNVVGQGTPAGCQRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15627; Mature: 15627
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMLILTGSVLTLAGCAGFGMPTPDPSQAWIDLDARQQDTALQALEVDNKASVDHRYFEV CEEEEEECCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCEEEEE QPGSHELRVRYQFPVEATNIGPDAEPLWRDCQLSVKFKDFNAGQRYQLQAGSIGFRPWAK CCCCCEEEEEEECCEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCHHHH LYDQQRNVVGQGTPAGCQRT HHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MRMLILTGSVLTLAGCAGFGMPTPDPSQAWIDLDARQQDTALQALEVDNKASVDHRYFEV CEEEEEECCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCEEEEE QPGSHELRVRYQFPVEATNIGPDAEPLWRDCQLSVKFKDFNAGQRYQLQAGSIGFRPWAK CCCCCEEEEEEECCEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCHHHH LYDQQRNVVGQGTPAGCQRT HHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA