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The map label for this gene is yrdA [H]

Identifier: 77456319

GI number: 77456319

Start: 98321

End: 98866

Strand: Direct

Name: yrdA [H]

Synonym: Pfl01_0091

Alternate gene names: 77456319

Gene position: 98321-98866 (Clockwise)

Preceding gene: 77456315

Following gene: 77456320

Centisome position: 1.53

GC content: 63.37

Gene sequence:

>546_bases
GTGTCCCTTCGCAAGTACCAGAATCACACCCCACGCTTGGGCCAAGGCGCTTTTGTCGACGGCTCGGCGGTGGTGATCGG
CGACGTCGAAATCGGCGAAGATAGCTCCGTGTGGCCGCTGACCGTGATCCGTGGCGACATGCACCGCATCCGTATCGGCG
CGCGCACCAGCGTGCAGGACGGCTGCGTGTTGCACATTACCCACGCCGGCCCGTTCAACCCGGACGGCTTCCCGCTCCTG
ATCGGCGATGACGTGACCATCGCCCACAAGGTCATGCTGCACGGCTGCACCGTCGGCAGCCGCGTGTTGATCGGCATGGG
CAGCATCGTCATGGACGGCGCGGTGGTCGAGGACGACGTGATCATCGGCGCCGGCAGCCTGGTGCCACCGGGCAAGCATC
TGGAAAGCGGCTTTCTGTACGTCGGCAGTCCGGTGAAACAGATCCGCCAGCTGACCGACAAGGAAAACGCCTTTTTCACC
TACAGCGCGGCGAACTACGTGAAGCTCAAGGACCTGCATCTGGCTGAAGGCTACGACCAGCTCTGA

Upstream 100 bases:

>100_bases
TTCACGCTCACGGTTGGCACCTTGGCTGGAAGAAACATGCGCCCATCTTAATTACAATCGACACCCACCGCAGCTATCGG
CGACAGAGAGAGAACTAATC

Downstream 100 bases:

>100_bases
CTTTTCTTTCTACCGCCCGGGATTTTTCATGCATTACCAGACCGTACTGTTCGACCTTGACGGCACCCTCACCGACCCGC
GTGAGGGCATCACCCGTTCC

Product: hexapaptide repeat-containing transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MSLRKYQNHTPRLGQGAFVDGSAVVIGDVEIGEDSSVWPLTVIRGDMHRIRIGARTSVQDGCVLHITHAGPFNPDGFPLL
IGDDVTIAHKVMLHGCTVGSRVLIGMGSIVMDGAVVEDDVIIGAGSLVPPGKHLESGFLYVGSPVKQIRQLTDKENAFFT
YSAANYVKLKDLHLAEGYDQL

Sequences:

>Translated_181_residues
MSLRKYQNHTPRLGQGAFVDGSAVVIGDVEIGEDSSVWPLTVIRGDMHRIRIGARTSVQDGCVLHITHAGPFNPDGFPLL
IGDDVTIAHKVMLHGCTVGSRVLIGMGSIVMDGAVVEDDVIIGAGSLVPPGKHLESGFLYVGSPVKQIRQLTDKENAFFT
YSAANYVKLKDLHLAEGYDQL
>Mature_180_residues
SLRKYQNHTPRLGQGAFVDGSAVVIGDVEIGEDSSVWPLTVIRGDMHRIRIGARTSVQDGCVLHITHAGPFNPDGFPLLI
GDDVTIAHKVMLHGCTVGSRVLIGMGSIVMDGAVVEDDVIIGAGSLVPPGKHLESGFLYVGSPVKQIRQLTDKENAFFTY
SAANYVKLKDLHLAEGYDQL

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=175, Percent_Identity=63.4285714285714, Blast_Score=241, Evalue=3e-65,
Organism=Escherichia coli, GI1787667, Length=169, Percent_Identity=35.5029585798817, Blast_Score=108, Evalue=2e-25,
Organism=Escherichia coli, GI87081681, Length=169, Percent_Identity=34.9112426035503, Blast_Score=102, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19466; Mature: 19334

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRKYQNHTPRLGQGAFVDGSAVVIGDVEIGEDSSVWPLTVIRGDMHRIRIGARTSVQD
CCCCCCCCCCCCCCCCEEECCCEEEEEEEEECCCCCCCEEEEEECCCEEEEECCCCCCCC
GCVLHITHAGPFNPDGFPLLIGDDVTIAHKVMLHGCTVGSRVLIGMGSIVMDGAVVEDDV
CEEEEEEECCCCCCCCEEEEEECCCCEEEEEEHCCCCCCCEEEEECCCEEECCEEECCCE
IIGAGSLVPPGKHLESGFLYVGSPVKQIRQLTDKENAFFTYSAANYVKLKDLHLAEGYDQ
EEECCCCCCCCCCCCCCEEEECCHHHHHHHHCCCCCEEEEEECCCEEEEEEEEECCCCCC
L
C
>Mature Secondary Structure 
SLRKYQNHTPRLGQGAFVDGSAVVIGDVEIGEDSSVWPLTVIRGDMHRIRIGARTSVQD
CCCCCCCCCCCCCCCEEECCCEEEEEEEEECCCCCCCEEEEEECCCEEEEECCCCCCCC
GCVLHITHAGPFNPDGFPLLIGDDVTIAHKVMLHGCTVGSRVLIGMGSIVMDGAVVEDDV
CEEEEEEECCCCCCCCEEEEEECCCCEEEEEEHCCCCCCCEEEEECCCEEECCEEECCCE
IIGAGSLVPPGKHLESGFLYVGSPVKQIRQLTDKENAFFTYSAANYVKLKDLHLAEGYDQ
EEECCCCCCCCCCCCCCEEEECCHHHHHHHHCCCCCEEEEEECCCEEEEEEEEECCCCCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]