| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77456315
Identifier: 77456315
GI number: 77456315
Start: 93107
End: 93751
Strand: Direct
Name: 77456315
Synonym: Pfl01_0087
Alternate gene names: NA
Gene position: 93107-93751 (Clockwise)
Preceding gene: 77456308
Following gene: 77456319
Centisome position: 1.45
GC content: 60.16
Gene sequence:
>645_bases ATGTTCCTGACGCGTTTTTCCTCCGTACTCTGTTTGTCGCTGCTTGCCCTGTTCGGCTGGACTTCAGCTCAAGCCGCGGA CACTCTGGCTTCCCGTCCCGTCGAGTGGGCGCAACCGGTAGAAGTGCAATACAACCTGTTCCAGATGTCGCCCACGCTTT ACCGCAGTGCACTCCCCGATGACGGCGCGGTGCCGTTGCTGAACAACCTGAAGGTGGTCACGGTCATCAACTTCCTGCCG GAAGCGGATTCCAACTGGCTGAAAGCCCCCGGTATCCATCAGGTGCAATTGCCCTATCGCACCAATCACGTGGACGACAG TGATGTGCTCAAGACCCTGCGTGCCATTCAGTCCGCCGAAGCCGAAGGCCCGGTGCTGATGCACTGCAAGCACGGCTCCG ATCGCACCGGCCTGATGGCGGCGATGTACCGGATCGTCGTGCAGGGCTGGAGCAAGGAAGACGCCCTGAACGAAATGACC CAGGGCGGCTTTGGCGAGAGTGGGCACTTCCGGGACAGCGTGCGCTACGTGATGCAGGCCGATGTCGACAAGTTGCGCAC CGCGCTGGCCAATGGCGATTGCAGCACCAGCGCGTTTGCCACGTGCTCGATGAAGAGCTGGTTTCAGACGGTCAATCTGA AGTAA
Upstream 100 bases:
>100_bases CGATATTCACGATTCTTTTACAAGCGCCTCACAGGGATTTGACTGCGAAGCTCGCAAGCTGCGGCCTTCATTGACGAAAC CCACACGGTCGCCGTAAAGC
Downstream 100 bases:
>100_bases CTCGTCCGGCCTCTCCGTCAACGAGGCCGGCGACCGGCCGGCCGATGAACGCTTCCACCGCGTCCAGCAATGGACGCCCC GCACCCGGCGCAAAGAACGT
Product: protein tyrosine/serine phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MFLTRFSSVLCLSLLALFGWTSAQAADTLASRPVEWAQPVEVQYNLFQMSPTLYRSALPDDGAVPLLNNLKVVTVINFLP EADSNWLKAPGIHQVQLPYRTNHVDDSDVLKTLRAIQSAEAEGPVLMHCKHGSDRTGLMAAMYRIVVQGWSKEDALNEMT QGGFGESGHFRDSVRYVMQADVDKLRTALANGDCSTSAFATCSMKSWFQTVNLK
Sequences:
>Translated_214_residues MFLTRFSSVLCLSLLALFGWTSAQAADTLASRPVEWAQPVEVQYNLFQMSPTLYRSALPDDGAVPLLNNLKVVTVINFLP EADSNWLKAPGIHQVQLPYRTNHVDDSDVLKTLRAIQSAEAEGPVLMHCKHGSDRTGLMAAMYRIVVQGWSKEDALNEMT QGGFGESGHFRDSVRYVMQADVDKLRTALANGDCSTSAFATCSMKSWFQTVNLK >Mature_214_residues MFLTRFSSVLCLSLLALFGWTSAQAADTLASRPVEWAQPVEVQYNLFQMSPTLYRSALPDDGAVPLLNNLKVVTVINFLP EADSNWLKAPGIHQVQLPYRTNHVDDSDVLKTLRAIQSAEAEGPVLMHCKHGSDRTGLMAAMYRIVVQGWSKEDALNEMT QGGFGESGHFRDSVRYVMQADVDKLRTALANGDCSTSAFATCSMKSWFQTVNLK
Specific function: Unknown
COG id: COG2365
COG function: function code T; Protein tyrosine/serine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23676; Mature: 23676
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: PS00383 TYR_PHOSPHATASE_1 ; PS50056 TYR_PHOSPHATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLTRFSSVLCLSLLALFGWTSAQAADTLASRPVEWAQPVEVQYNLFQMSPTLYRSALPD CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHCCCC DGAVPLLNNLKVVTVINFLPEADSNWLKAPGIHQVQLPYRTNHVDDSDVLKTLRAIQSAE CCCCCHHHCCEEEHHEECCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCC AEGPVLMHCKHGSDRTGLMAAMYRIVVQGWSKEDALNEMTQGGFGESGHFRDSVRYVMQA CCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHH DVDKLRTALANGDCSTSAFATCSMKSWFQTVNLK HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFLTRFSSVLCLSLLALFGWTSAQAADTLASRPVEWAQPVEVQYNLFQMSPTLYRSALPD CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHCCCC DGAVPLLNNLKVVTVINFLPEADSNWLKAPGIHQVQLPYRTNHVDDSDVLKTLRAIQSAE CCCCCHHHCCEEEHHEECCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCC AEGPVLMHCKHGSDRTGLMAAMYRIVVQGWSKEDALNEMTQGGFGESGHFRDSVRYVMQA CCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHH DVDKLRTALANGDCSTSAFATCSMKSWFQTVNLK HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA